RNA–Protein interactions for RNA: ENST00000572576.5

TOM1L1-214, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1L1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-214ENST00000572576 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
TOM1L1-214ENST00000572576 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
TOM1L1-214ENST00000572576 ABCC9O60706 1549 aa28.08■■■□□ 2.08
TOM1L1-214ENST00000572576 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
TOM1L1-214ENST00000572576 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
TOM1L1-214ENST00000572576 NACADO15069 1562 aa26.92■■□□□ 1.9
TOM1L1-214ENST00000572576 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
TOM1L1-214ENST00000572576 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
TOM1L1-214ENST00000572576 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
TOM1L1-214ENST00000572576 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
TOM1L1-214ENST00000572576 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
TOM1L1-214ENST00000572576 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
TOM1L1-214ENST00000572576 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
TOM1L1-214ENST00000572576 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
TOM1L1-214ENST00000572576 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
TOM1L1-214ENST00000572576 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
TOM1L1-214ENST00000572576 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
TOM1L1-214ENST00000572576 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
TOM1L1-214ENST00000572576 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
TOM1L1-214ENST00000572576 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
TOM1L1-214ENST00000572576 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
TOM1L1-214ENST00000572576 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
TOM1L1-214ENST00000572576 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
TOM1L1-214ENST00000572576 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
TOM1L1-214ENST00000572576 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
TOM1L1-214ENST00000572576 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
TOM1L1-214ENST00000572576 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
TOM1L1-214ENST00000572576 WIZO95785 1651 aa24.63■■□□□ 1.53
TOM1L1-214ENST00000572576 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
TOM1L1-214ENST00000572576 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
TOM1L1-214ENST00000572576 NESP48681 1621 aa24.28■■□□□ 1.48
TOM1L1-214ENST00000572576 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
TOM1L1-214ENST00000572576 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
TOM1L1-214ENST00000572576 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
TOM1L1-214ENST00000572576 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
TOM1L1-214ENST00000572576 CCDC88BA6NC98 1476 aa24.04■■□□□ 1.44
TOM1L1-214ENST00000572576 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
TOM1L1-214ENST00000572576 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
TOM1L1-214ENST00000572576 CFTRP13569 1480 aa23.96■■□□□ 1.43
TOM1L1-214ENST00000572576 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
TOM1L1-214ENST00000572576 CUX2O14529 1486 aa23.87■■□□□ 1.41
TOM1L1-214ENST00000572576 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
TOM1L1-214ENST00000572576 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
TOM1L1-214ENST00000572576 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
TOM1L1-214ENST00000572576 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
TOM1L1-214ENST00000572576 WDR62O43379 1518 aa23.7■■□□□ 1.38
TOM1L1-214ENST00000572576 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
TOM1L1-214ENST00000572576 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
TOM1L1-214ENST00000572576 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
TOM1L1-214ENST00000572576 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
TOM1L1-214ENST00000572576 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
TOM1L1-214ENST00000572576 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
TOM1L1-214ENST00000572576 CUX1P39880 1505 aa23.33■■□□□ 1.32
TOM1L1-214ENST00000572576 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
TOM1L1-214ENST00000572576 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
TOM1L1-214ENST00000572576 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
TOM1L1-214ENST00000572576 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
TOM1L1-214ENST00000572576 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
TOM1L1-214ENST00000572576 SOGA1O94964 1423 aa23.19■■□□□ 1.3
TOM1L1-214ENST00000572576 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
TOM1L1-214ENST00000572576 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
TOM1L1-214ENST00000572576 SYNJ1O43426 1573 aa23.14■■□□□ 1.3
TOM1L1-214ENST00000572576 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
TOM1L1-214ENST00000572576 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
TOM1L1-214ENST00000572576 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
TOM1L1-214ENST00000572576 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
TOM1L1-214ENST00000572576 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
TOM1L1-214ENST00000572576 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
TOM1L1-214ENST00000572576 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
TOM1L1-214ENST00000572576 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
TOM1L1-214ENST00000572576 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
TOM1L1-214ENST00000572576 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
TOM1L1-214ENST00000572576 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
TOM1L1-214ENST00000572576 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
TOM1L1-214ENST00000572576 CHD1O14646 1710 aa22.91■■□□□ 1.26
TOM1L1-214ENST00000572576 FBLN2P98095 1184 aa22.9■■□□□ 1.26
TOM1L1-214ENST00000572576 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
TOM1L1-214ENST00000572576 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
TOM1L1-214ENST00000572576 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
TOM1L1-214ENST00000572576 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
TOM1L1-214ENST00000572576 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
TOM1L1-214ENST00000572576 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
TOM1L1-214ENST00000572576 KIF27Q86VH2 1401 aa22.7■■□□□ 1.22
TOM1L1-214ENST00000572576 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
TOM1L1-214ENST00000572576 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
TOM1L1-214ENST00000572576 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
TOM1L1-214ENST00000572576 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
TOM1L1-214ENST00000572576 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
TOM1L1-214ENST00000572576 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
TOM1L1-214ENST00000572576 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
TOM1L1-214ENST00000572576 CUL7Q14999 1698 aa22.57■■□□□ 1.2
TOM1L1-214ENST00000572576 IGF1RP08069 1367 aa22.55■■□□□ 1.2
TOM1L1-214ENST00000572576 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
TOM1L1-214ENST00000572576 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
TOM1L1-214ENST00000572576 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
TOM1L1-214ENST00000572576 NUP160Q12769 1436 aa22.49■■□□□ 1.19
TOM1L1-214ENST00000572576 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
TOM1L1-214ENST00000572576 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
TOM1L1-214ENST00000572576 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
TOM1L1-214ENST00000572576 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms