RNA–Protein interactions for RNA: ENST00000564227.5

NUBP2-205, Transcript of nucleotide binding protein 2, humanhuman

TSL 3

Gene NUBP2, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP2-205ENST00000564227 NISCHQ9Y2I1 1504 aa55.99■■■■■ 6.55
NUBP2-205ENST00000564227 ABCC9O60706 1549 aa50.72■■■■■ 5.71
NUBP2-205ENST00000564227 CCDC180Q9P1Z9 1646 aa50.54■■■■■ 5.68
NUBP2-205ENST00000564227 RB1CC1Q8TDY2 1594 aa48.21■■■■■ 5.31
NUBP2-205ENST00000564227 DNAJC5BQ9UF47 199 aa47.81■■■■■ 5.24
NUBP2-205ENST00000564227 NACADO15069 1562 aa47.77■■■■■ 5.24
NUBP2-205ENST00000564227 DCAF8L2P0C7V8 631 aa47.26■■■■■ 5.16
NUBP2-205ENST00000564227 UNC13AQ9UPW8 1703 aa47.25■■■■■ 5.15
NUBP2-205ENST00000564227 PABPN1Q86U42 306 aaKnown RBP eCLIP47.07■■■■■ 5.13
NUBP2-205ENST00000564227 MYO15BQ96JP2 1530 aa47■■■■■ 5.11
NUBP2-205ENST00000564227 BICRAQ9NZM4 1560 aa46.81■■■■■ 5.08
NUBP2-205ENST00000564227 ZCCHC6Q5VYS8 1495 aaKnown RBP46.34■■■■■ 5.01
NUBP2-205ENST00000564227 DCAF1Q9Y4B6 1507 aa46.27■■■■■ 5
NUBP2-205ENST00000564227 SHROOM4Q9ULL8 1493 aa46.16■■■■■ 4.98
NUBP2-205ENST00000564227 SCRIBQ14160 1630 aa45.93■■■■■ 4.94
NUBP2-205ENST00000564227 CC2D2AQ9P2K1 1620 aa45.88■■■■■ 4.93
NUBP2-205ENST00000564227 CECR2Q9BXF3 1484 aa45.73■■■■■ 4.91
NUBP2-205ENST00000564227 EIF4G1Q04637 1599 aaKnown RBP45.68■■■■■ 4.9
NUBP2-205ENST00000564227 DNAJC5Q9H3Z4 198 aa44.19■■■■■ 4.66
NUBP2-205ENST00000564227 NCAPD3P42695 1498 aa44.05■■■■■ 4.64
NUBP2-205ENST00000564227 CUX2O14529 1486 aa43.9■■■■■ 4.62
NUBP2-205ENST00000564227 ATAD2BQ9ULI0 1458 aa43.86■■■■■ 4.61
NUBP2-205ENST00000564227 ERCC6Q03468 1493 aa43.82■■■■■ 4.6
NUBP2-205ENST00000564227 SMARCA4P51532 1647 aa43.81■■■■■ 4.6
NUBP2-205ENST00000564227 SMARCA2P51531 1590 aa43.78■■■■■ 4.6
NUBP2-205ENST00000564227 HMGXB3Q12766 1538 aa43.76■■■■■ 4.6
NUBP2-205ENST00000564227 BAZ1AQ9NRL2 1556 aaPredicted RBP43.52■■■■■ 4.56
NUBP2-205ENST00000564227 NESP48681 1621 aa43.48■■■■■ 4.55
NUBP2-205ENST00000564227 BAZ1BQ9UIG0 1483 aaKnown RBP43.44■■■■■ 4.54
NUBP2-205ENST00000564227 PEG3Q9GZU2 1588 aa43.39■■■■■ 4.54
NUBP2-205ENST00000564227 THOC2Q8NI27 1593 aaKnown RBP43.2■■■■■ 4.51
NUBP2-205ENST00000564227 LAMC3Q9Y6N6 1575 aa43.2■■■■■ 4.51
NUBP2-205ENST00000564227 MROH2BQ7Z745 1585 aa43.12■■■■■ 4.49
NUBP2-205ENST00000564227 KIF21AQ7Z4S6 1674 aa43.05■■■■■ 4.48
NUBP2-205ENST00000564227 PDS5BQ9NTI5 1447 aa42.87■■■■■ 4.45
NUBP2-205ENST00000564227 CADPSQ9ULU8 1353 aa42.66■■■■■ 4.42
NUBP2-205ENST00000564227 WIZO95785 1651 aa42.66■■■■■ 4.42
NUBP2-205ENST00000564227 MRC2Q9UBG0 1479 aa42.55■■■■■ 4.4
NUBP2-205ENST00000564227 WDR62O43379 1518 aa42.5■■■■■ 4.39
NUBP2-205ENST00000564227 CEP164Q9UPV0 1460 aa42.31■■■■■ 4.36
NUBP2-205ENST00000564227 FANCD2Q9BXW9 1451 aa42.21■■■■■ 4.35
NUBP2-205ENST00000564227 CFTRP13569 1480 aa42.14■■■■■ 4.34
NUBP2-205ENST00000564227 TRIM41Q8WV44 630 aa42.08■■■■■ 4.33
NUBP2-205ENST00000564227 TOP2AP11388 1531 aaKnown RBP42.07■■■■■ 4.33
NUBP2-205ENST00000564227 RSF1Q96T23 1441 aaPredicted RBP42.06■■■■■ 4.32
NUBP2-205ENST00000564227 PRDM2Q13029 1718 aa41.92■■■■■ 4.3
NUBP2-205ENST00000564227 URB2Q14146 1524 aaKnown RBP41.9■■■■■ 4.3
NUBP2-205ENST00000564227 OSCARQ8IYS5 282 aa41.74■■■■■ 4.27
NUBP2-205ENST00000564227 CCDC88BA6NC98 1476 aa41.53■■■■■ 4.24
NUBP2-205ENST00000564227 IFT140Q96RY7 1462 aa41.47■■■■■ 4.23
NUBP2-205ENST00000564227 ZNF608Q9ULD9 1512 aaPredicted RBP41.43■■■■■ 4.22
NUBP2-205ENST00000564227 TOPBP1Q92547 1522 aa41.39■■■■■ 4.22
NUBP2-205ENST00000564227 RIMBP3CA6NJZ7 1639 aa41.38■■■■■ 4.21
NUBP2-205ENST00000564227 RIMBP3BA6NNM3 1639 aa41.38■■■■■ 4.21
NUBP2-205ENST00000564227 RIMBP3Q9UFD9 1639 aa41.38■■■■■ 4.21
NUBP2-205ENST00000564227 ABCC8Q09428 1581 aa41.29■■■■■ 4.2
NUBP2-205ENST00000564227 EIF4G3O43432 1585 aaKnown RBP41.28■■■■■ 4.2
NUBP2-205ENST00000564227 DNMBPQ6XZF7 1577 aa41.25■■■■■ 4.19
NUBP2-205ENST00000564227 ARHGEF11O15085 1522 aa41.17■■■■■ 4.18
NUBP2-205ENST00000564227 TARBP1Q13395 1621 aaKnown RBP41.11■■■■■ 4.17
NUBP2-205ENST00000564227 CHD1O14646 1710 aa41.1■■■■■ 4.17
NUBP2-205ENST00000564227 AQRO60306 1485 aaKnown RBP eCLIP40.97■■■■■ 4.153e-7■■■■□ 23.2
NUBP2-205ENST00000564227 POLA1P09884 1462 aaPredicted RBP40.94■■■■■ 4.14
NUBP2-205ENST00000564227 CYB5RLQ6IPT4 315 aa40.77■■■■■ 4.12
NUBP2-205ENST00000564227 RAD54L2Q9Y4B4 1467 aa40.77■■■■■ 4.12
NUBP2-205ENST00000564227 FBLN2P98095 1184 aa40.73■■■■■ 4.11
NUBP2-205ENST00000564227 ARAP1Q96P48 1450 aa40.71■■■■■ 4.11
NUBP2-205ENST00000564227 WDR97A6NE52 1622 aa40.71■■■■■ 4.11
NUBP2-205ENST00000564227 SOGA1O94964 1423 aa40.7■■■■■ 4.11
NUBP2-205ENST00000564227 TDRD9Q8NDG6 1382 aaKnown RBP40.64■■■■■ 4.1
NUBP2-205ENST00000564227 FGD5Q6ZNL6 1462 aa40.64■■■■■ 4.1
NUBP2-205ENST00000564227 SNAPC4Q5SXM2 1469 aa40.58■■■■■ 4.09
NUBP2-205ENST00000564227 CUX1P39880 1505 aa40.55■■■■■ 4.08
NUBP2-205ENST00000564227 CLASP1Q7Z460 1538 aa40.53■■■■■ 4.08
NUBP2-205ENST00000564227 MAGI1Q96QZ7 1491 aaPredicted RBP40.49■■■■■ 4.07
NUBP2-205ENST00000564227 SYNJ1O43426 1573 aa40.48■■■■■ 4.07
NUBP2-205ENST00000564227 TRHP20396 242 aaPredicted RBP40.44■■■■■ 4.06
NUBP2-205ENST00000564227 GRIN2BQ13224 1484 aa40.43■■■■■ 4.06
NUBP2-205ENST00000564227 PBRM1Q86U86 1689 aa40.4■■■■■ 4.06
NUBP2-205ENST00000564227 CHMP7Q8WUX9 453 aaPredicted RBP40.39■■■■■ 4.06
NUBP2-205ENST00000564227 SYNJ2O15056 1496 aa40.35■■■■■ 4.05
NUBP2-205ENST00000564227 GAPVD1Q14C86 1478 aa40.24■■■■■ 4.03
NUBP2-205ENST00000564227 ABCA5Q8WWZ7 1642 aa40.2■■■■■ 4.03
NUBP2-205ENST00000564227 ABCA10Q8WWZ4 1543 aa40.16■■■■■ 4.02
NUBP2-205ENST00000564227 GRIN2AQ12879 1464 aa39.92■■■■□ 3.98
NUBP2-205ENST00000564227 ADAMTS12P58397 1594 aa39.91■■■■□ 3.98
NUBP2-205ENST00000564227 BIVM-ERCC5R4GMW8 1640 aa39.91■■■■□ 3.98
NUBP2-205ENST00000564227 WRNQ14191 1432 aaPredicted RBP eCLIP39.89■■■■□ 3.98
NUBP2-205ENST00000564227 TOP2BQ02880 1626 aa39.85■■■■□ 3.97
NUBP2-205ENST00000564227 SUPT5HO00267 1087 aaKnown RBP39.85■■■■□ 3.97
NUBP2-205ENST00000564227 ERCC6L2Q5T890 1561 aa39.84■■■■□ 3.97
NUBP2-205ENST00000564227 CEP170Q5SW79 1584 aa39.83■■■■□ 3.97
NUBP2-205ENST00000564227 NUP160Q12769 1436 aa39.79■■■■□ 3.96
NUBP2-205ENST00000564227 SHROOM2Q13796 1616 aa39.76■■■■□ 3.95
NUBP2-205ENST00000564227 FHAD1B1AJZ9 1412 aa39.7■■■■□ 3.95
NUBP2-205ENST00000564227 ERICH3Q5RHP9 1530 aa39.67■■■■□ 3.94
NUBP2-205ENST00000564227 AEBP2Q6ZN18 517 aaPredicted RBP39.53■■■■□ 3.92
NUBP2-205ENST00000564227 KIF13AQ9H1H9 1805 aa39.47■■■■□ 3.91
NUBP2-205ENST00000564227 PRG4Q92954 1404 aaPredicted RBP39.4■■■■□ 3.9
NUBP2-205ENST00000564227 RUSC2Q8N2Y8 1516 aa39.37■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms