RNA–Protein interactions for RNA: ENST00000571319.5

TOM1L1-209, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-209ENST00000571319 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
TOM1L1-209ENST00000571319 ABCC9O60706 1549 aa17.78■□□□□ 0.44
TOM1L1-209ENST00000571319 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
TOM1L1-209ENST00000571319 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
TOM1L1-209ENST00000571319 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
TOM1L1-209ENST00000571319 NACADO15069 1562 aa16.62■□□□□ 0.25
TOM1L1-209ENST00000571319 UNC13AQ9UPW8 1703 aa16.47■□□□□ 0.23
TOM1L1-209ENST00000571319 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
TOM1L1-209ENST00000571319 BICRAQ9NZM4 1560 aa16.32■□□□□ 0.2
TOM1L1-209ENST00000571319 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
TOM1L1-209ENST00000571319 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
TOM1L1-209ENST00000571319 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
TOM1L1-209ENST00000571319 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
TOM1L1-209ENST00000571319 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
TOM1L1-209ENST00000571319 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
TOM1L1-209ENST00000571319 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
TOM1L1-209ENST00000571319 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
TOM1L1-209ENST00000571319 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
TOM1L1-209ENST00000571319 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
TOM1L1-209ENST00000571319 DNAJC5Q9H3Z4 198 aa15.8■□□□□ 0.12
TOM1L1-209ENST00000571319 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
TOM1L1-209ENST00000571319 CUX2O14529 1486 aa15.52■□□□□ 0.08
TOM1L1-209ENST00000571319 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
TOM1L1-209ENST00000571319 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
TOM1L1-209ENST00000571319 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
TOM1L1-209ENST00000571319 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.02
TOM1L1-209ENST00000571319 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
TOM1L1-209ENST00000571319 THOC2Q8NI27 1593 aaKnown RBP15.16■□□□□ 0.02
TOM1L1-209ENST00000571319 NESP48681 1621 aa15.16■□□□□ 0.02
TOM1L1-209ENST00000571319 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
TOM1L1-209ENST00000571319 BAZ1BQ9UIG0 1483 aaKnown RBP15.08■□□□□ 0
TOM1L1-209ENST00000571319 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
TOM1L1-209ENST00000571319 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
TOM1L1-209ENST00000571319 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
TOM1L1-209ENST00000571319 PEG3Q9GZU2 1588 aa15.01□□□□□ -0.01
TOM1L1-209ENST00000571319 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
TOM1L1-209ENST00000571319 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
TOM1L1-209ENST00000571319 MRC2Q9UBG0 1479 aa14.87□□□□□ -0.03
TOM1L1-209ENST00000571319 WDR62O43379 1518 aa14.86□□□□□ -0.03
TOM1L1-209ENST00000571319 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
TOM1L1-209ENST00000571319 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
TOM1L1-209ENST00000571319 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
TOM1L1-209ENST00000571319 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
TOM1L1-209ENST00000571319 WIZO95785 1651 aa14.66□□□□□ -0.06
TOM1L1-209ENST00000571319 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
TOM1L1-209ENST00000571319 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
TOM1L1-209ENST00000571319 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
TOM1L1-209ENST00000571319 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
TOM1L1-209ENST00000571319 CFTRP13569 1480 aa14.58□□□□□ -0.07
TOM1L1-209ENST00000571319 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
TOM1L1-209ENST00000571319 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
TOM1L1-209ENST00000571319 ARHGEF11O15085 1522 aa14.5□□□□□ -0.09
TOM1L1-209ENST00000571319 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
TOM1L1-209ENST00000571319 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
TOM1L1-209ENST00000571319 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
TOM1L1-209ENST00000571319 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
TOM1L1-209ENST00000571319 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
TOM1L1-209ENST00000571319 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
TOM1L1-209ENST00000571319 CHD1O14646 1710 aa14.37□□□□□ -0.11
TOM1L1-209ENST00000571319 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
TOM1L1-209ENST00000571319 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
TOM1L1-209ENST00000571319 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
TOM1L1-209ENST00000571319 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
TOM1L1-209ENST00000571319 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
TOM1L1-209ENST00000571319 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
TOM1L1-209ENST00000571319 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
TOM1L1-209ENST00000571319 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
TOM1L1-209ENST00000571319 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.13
TOM1L1-209ENST00000571319 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
TOM1L1-209ENST00000571319 FBLN2P98095 1184 aa14.18□□□□□ -0.14
TOM1L1-209ENST00000571319 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
TOM1L1-209ENST00000571319 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
TOM1L1-209ENST00000571319 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
TOM1L1-209ENST00000571319 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
TOM1L1-209ENST00000571319 MAGI1Q96QZ7 1491 aaPredicted RBP14.09□□□□□ -0.15
TOM1L1-209ENST00000571319 RAD54L2Q9Y4B4 1467 aa14.09□□□□□ -0.15
TOM1L1-209ENST00000571319 SOGA1O94964 1423 aa14.07□□□□□ -0.16
TOM1L1-209ENST00000571319 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
TOM1L1-209ENST00000571319 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
TOM1L1-209ENST00000571319 SYNJ2O15056 1496 aa14.04□□□□□ -0.16
TOM1L1-209ENST00000571319 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
TOM1L1-209ENST00000571319 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
TOM1L1-209ENST00000571319 PBRM1Q86U86 1689 aa14.03□□□□□ -0.16
TOM1L1-209ENST00000571319 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
TOM1L1-209ENST00000571319 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
TOM1L1-209ENST00000571319 CUX1P39880 1505 aa13.97□□□□□ -0.17
TOM1L1-209ENST00000571319 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
TOM1L1-209ENST00000571319 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
TOM1L1-209ENST00000571319 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
TOM1L1-209ENST00000571319 GRIN2AQ12879 1464 aa13.86□□□□□ -0.19
TOM1L1-209ENST00000571319 CEP170Q5SW79 1584 aa13.86□□□□□ -0.19
TOM1L1-209ENST00000571319 KIF13AQ9H1H9 1805 aa13.86□□□□□ -0.19
TOM1L1-209ENST00000571319 ADAMTS12P58397 1594 aa13.85□□□□□ -0.19
TOM1L1-209ENST00000571319 SHROOM2Q13796 1616 aa13.84□□□□□ -0.19
TOM1L1-209ENST00000571319 NUP160Q12769 1436 aa13.82□□□□□ -0.2
TOM1L1-209ENST00000571319 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
TOM1L1-209ENST00000571319 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
TOM1L1-209ENST00000571319 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.21
TOM1L1-209ENST00000571319 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.21
TOM1L1-209ENST00000571319 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms