RNA–Protein interactions for RNA: ENST00000393085.3

MTPN-201, Transcript of myotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTPN, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTPN-201ENST00000393085 NISCHQ9Y2I1 1504 aa16.22■□□□□ 0.19
MTPN-201ENST00000393085 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.1
MTPN-201ENST00000393085 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
MTPN-201ENST00000393085 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.14
MTPN-201ENST00000393085 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
MTPN-201ENST00000393085 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
MTPN-201ENST00000393085 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
MTPN-201ENST00000393085 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
MTPN-201ENST00000393085 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
MTPN-201ENST00000393085 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
MTPN-201ENST00000393085 ABCC9O60706 1549 aa13.24□□□□□ -0.29
MTPN-201ENST00000393085 FAM9AQ8IZU1 332 aaPredicted RBP13.18□□□□□ -0.3
MTPN-201ENST00000393085 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
MTPN-201ENST00000393085 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
MTPN-201ENST00000393085 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
MTPN-201ENST00000393085 PPARGC1BQ86YN6 1023 aaKnown RBP12.98□□□□□ -0.33
MTPN-201ENST00000393085 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
MTPN-201ENST00000393085 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
MTPN-201ENST00000393085 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
MTPN-201ENST00000393085 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
MTPN-201ENST00000393085 HRCP23327 699 aa12.84□□□□□ -0.35
MTPN-201ENST00000393085 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
MTPN-201ENST00000393085 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
MTPN-201ENST00000393085 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
MTPN-201ENST00000393085 WIZO95785 1651 aa12.68□□□□□ -0.38
MTPN-201ENST00000393085 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
MTPN-201ENST00000393085 NACADO15069 1562 aa12.63□□□□□ -0.39
MTPN-201ENST00000393085 RANGAP1P46060 587 aaPredicted RBP12.59□□□□□ -0.39
MTPN-201ENST00000393085 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
MTPN-201ENST00000393085 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
MTPN-201ENST00000393085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
MTPN-201ENST00000393085 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.42
MTPN-201ENST00000393085 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
MTPN-201ENST00000393085 SOGA1O94964 1423 aa12.41□□□□□ -0.42
MTPN-201ENST00000393085 BAZ1AQ9NRL2 1556 aaPredicted RBP12.4□□□□□ -0.42
MTPN-201ENST00000393085 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
MTPN-201ENST00000393085 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
MTPN-201ENST00000393085 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
MTPN-201ENST00000393085 CCER1Q8TC90 406 aaPredicted RBP12.32□□□□□ -0.44
MTPN-201ENST00000393085 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
MTPN-201ENST00000393085 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
MTPN-201ENST00000393085 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
MTPN-201ENST00000393085 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
MTPN-201ENST00000393085 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
MTPN-201ENST00000393085 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
MTPN-201ENST00000393085 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
MTPN-201ENST00000393085 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
MTPN-201ENST00000393085 MYT1Q01538 1121 aa12.14□□□□□ -0.47
MTPN-201ENST00000393085 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
MTPN-201ENST00000393085 BAZ1BQ9UIG0 1483 aaKnown RBP12.13□□□□□ -0.47
MTPN-201ENST00000393085 ZEB1P37275 1124 aaPredicted RBP12.13□□□□□ -0.47
MTPN-201ENST00000393085 SYNJ1O43426 1573 aa12.08□□□□□ -0.48
MTPN-201ENST00000393085 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
MTPN-201ENST00000393085 ITGAEP38570 1179 aa12.05□□□□□ -0.48
MTPN-201ENST00000393085 APLP2Q06481 763 aa12.04□□□□□ -0.48
MTPN-201ENST00000393085 RAPGEF2Q9Y4G8 1499 aa12.03□□□□□ -0.48
MTPN-201ENST00000393085 P3H3Q8IVL6 736 aa12□□□□□ -0.49
MTPN-201ENST00000393085 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
MTPN-201ENST00000393085 CLIP1P30622 1438 aa12□□□□□ -0.49
MTPN-201ENST00000393085 GOLGA3Q08378 1498 aa11.99□□□□□ -0.49
MTPN-201ENST00000393085 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
MTPN-201ENST00000393085 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
MTPN-201ENST00000393085 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
MTPN-201ENST00000393085 DIEXFQ68CQ4 756 aaKnown RBP11.96□□□□□ -0.49
MTPN-201ENST00000393085 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
MTPN-201ENST00000393085 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
MTPN-201ENST00000393085 EEA1Q15075 1411 aa11.9□□□□□ -0.5
MTPN-201ENST00000393085 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
MTPN-201ENST00000393085 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
MTPN-201ENST00000393085 CUX1P39880 1505 aa11.83□□□□□ -0.52
MTPN-201ENST00000393085 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
MTPN-201ENST00000393085 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
MTPN-201ENST00000393085 KIF21BO75037 1637 aa11.8□□□□□ -0.52
MTPN-201ENST00000393085 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
MTPN-201ENST00000393085 MIER1Q8N108 512 aa11.79□□□□□ -0.52
MTPN-201ENST00000393085 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
MTPN-201ENST00000393085 CUX2O14529 1486 aa11.78□□□□□ -0.52
MTPN-201ENST00000393085 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
MTPN-201ENST00000393085 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
MTPN-201ENST00000393085 NESP48681 1621 aa11.76□□□□□ -0.53
MTPN-201ENST00000393085 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
MTPN-201ENST00000393085 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
MTPN-201ENST00000393085 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
MTPN-201ENST00000393085 CFTRP13569 1480 aa11.74□□□□□ -0.53
MTPN-201ENST00000393085 IGF1RP08069 1367 aa11.73□□□□□ -0.53
MTPN-201ENST00000393085 PRXQ9BXM0 1461 aa11.73□□□□□ -0.53
MTPN-201ENST00000393085 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
MTPN-201ENST00000393085 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
MTPN-201ENST00000393085 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
MTPN-201ENST00000393085 ACIN1Q9UKV3 1341 aaKnown RBP11.72□□□□□ -0.53
MTPN-201ENST00000393085 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.53
MTPN-201ENST00000393085 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
MTPN-201ENST00000393085 FGD5Q6ZNL6 1462 aa11.68□□□□□ -0.54
MTPN-201ENST00000393085 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
MTPN-201ENST00000393085 CC2D2AQ9P2K1 1620 aa11.67□□□□□ -0.54
MTPN-201ENST00000393085 ARHGAP35Q9NRY4 1499 aa11.67□□□□□ -0.54
MTPN-201ENST00000393085 SIN3AQ96ST3 1273 aa11.66□□□□□ -0.54
MTPN-201ENST00000393085 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
MTPN-201ENST00000393085 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
MTPN-201ENST00000393085 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms