RNA–Protein interactions for RNA: ENST00000477441.1

TRIP12-214, Transcript of thyroid hormone receptor interactor 12, humanhuman

TSL 3

Gene TRIP12, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP12-214ENST00000477441 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
TRIP12-214ENST00000477441 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
TRIP12-214ENST00000477441 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
TRIP12-214ENST00000477441 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
TRIP12-214ENST00000477441 FOXD1Q16676 465 aa20.99■□□□□ 0.95
TRIP12-214ENST00000477441 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
TRIP12-214ENST00000477441 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
TRIP12-214ENST00000477441 ADRA2BP18089 450 aa19.8■□□□□ 0.76
TRIP12-214ENST00000477441 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
TRIP12-214ENST00000477441 MSH5O43196 834 aa19.66■□□□□ 0.74
TRIP12-214ENST00000477441 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
TRIP12-214ENST00000477441 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
TRIP12-214ENST00000477441 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
TRIP12-214ENST00000477441 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
TRIP12-214ENST00000477441 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
TRIP12-214ENST00000477441 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
TRIP12-214ENST00000477441 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
TRIP12-214ENST00000477441 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
TRIP12-214ENST00000477441 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
TRIP12-214ENST00000477441 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
TRIP12-214ENST00000477441 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
TRIP12-214ENST00000477441 KCNA4P22459 653 aa17.11■□□□□ 0.33
TRIP12-214ENST00000477441 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
TRIP12-214ENST00000477441 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
TRIP12-214ENST00000477441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRIP12-214ENST00000477441 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
TRIP12-214ENST00000477441 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
TRIP12-214ENST00000477441 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
TRIP12-214ENST00000477441 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
TRIP12-214ENST00000477441 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
TRIP12-214ENST00000477441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
TRIP12-214ENST00000477441 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
TRIP12-214ENST00000477441 APLP2Q06481 763 aa16.1■□□□□ 0.17
TRIP12-214ENST00000477441 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
TRIP12-214ENST00000477441 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
TRIP12-214ENST00000477441 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
TRIP12-214ENST00000477441 CAPN15O75808 1086 aa15.96■□□□□ 0.15
TRIP12-214ENST00000477441 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
TRIP12-214ENST00000477441 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
TRIP12-214ENST00000477441 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
TRIP12-214ENST00000477441 DSG3P32926 999 aa15.76■□□□□ 0.11
TRIP12-214ENST00000477441 ZBTB22O15209 634 aa15.67■□□□□ 0.1
TRIP12-214ENST00000477441 ABCB7O75027 752 aa15.54■□□□□ 0.08
TRIP12-214ENST00000477441 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
TRIP12-214ENST00000477441 POLA2Q14181 598 aa15.42■□□□□ 0.06
TRIP12-214ENST00000477441 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
TRIP12-214ENST00000477441 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
TRIP12-214ENST00000477441 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
TRIP12-214ENST00000477441 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
TRIP12-214ENST00000477441 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
TRIP12-214ENST00000477441 FBLN2P98095 1184 aa15□□□□□ -0.01
TRIP12-214ENST00000477441 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
TRIP12-214ENST00000477441 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
TRIP12-214ENST00000477441 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
TRIP12-214ENST00000477441 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
TRIP12-214ENST00000477441 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
TRIP12-214ENST00000477441 MKRN4PQ13434 485 aaPredicted RBP14.75□□□□□ -0.05
TRIP12-214ENST00000477441 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
TRIP12-214ENST00000477441 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
TRIP12-214ENST00000477441 POTEHQ6S545 545 aa14.59□□□□□ -0.07
TRIP12-214ENST00000477441 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
TRIP12-214ENST00000477441 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
TRIP12-214ENST00000477441 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
TRIP12-214ENST00000477441 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
TRIP12-214ENST00000477441 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIP12-214ENST00000477441 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
TRIP12-214ENST00000477441 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
TRIP12-214ENST00000477441 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 10.1
TRIP12-214ENST00000477441 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
TRIP12-214ENST00000477441 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
TRIP12-214ENST00000477441 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
TRIP12-214ENST00000477441 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
TRIP12-214ENST00000477441 PROM2Q8N271 834 aa14□□□□□ -0.17
TRIP12-214ENST00000477441 HAX1O00165 279 aa13.98□□□□□ -0.17
TRIP12-214ENST00000477441 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
TRIP12-214ENST00000477441 FKBP8Q14318 412 aa13.91□□□□□ -0.18
TRIP12-214ENST00000477441 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
TRIP12-214ENST00000477441 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
TRIP12-214ENST00000477441 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
TRIP12-214ENST00000477441 C19orf67A6NJJ6 358 aa13.81□□□□□ -0.2
TRIP12-214ENST00000477441 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
TRIP12-214ENST00000477441 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRIP12-214ENST00000477441 EVX2Q03828 476 aa13.69□□□□□ -0.22
TRIP12-214ENST00000477441 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
TRIP12-214ENST00000477441 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
TRIP12-214ENST00000477441 MIER1Q8N108 512 aa13.65□□□□□ -0.22
TRIP12-214ENST00000477441 CLCN6P51797 869 aa13.63□□□□□ -0.23
TRIP12-214ENST00000477441 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
TRIP12-214ENST00000477441 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
TRIP12-214ENST00000477441 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
TRIP12-214ENST00000477441 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
TRIP12-214ENST00000477441 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
TRIP12-214ENST00000477441 GABBR2O75899 941 aa13.51□□□□□ -0.25
TRIP12-214ENST00000477441 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
TRIP12-214ENST00000477441 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
TRIP12-214ENST00000477441 TSPYL2Q9H2G4 693 aaPredicted RBP13.37□□□□□ -0.27
TRIP12-214ENST00000477441 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
TRIP12-214ENST00000477441 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
TRIP12-214ENST00000477441 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
TRIP12-214ENST00000477441 NUBP1P53384 320 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms