RNA–Protein interactions for RNA: ENST00000530348.5

RCN1-206, Transcript of reticulocalbin 1, humanhuman

TSL 4

Gene RCN1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-206ENST00000530348 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
RCN1-206ENST00000530348 ABCC9O60706 1549 aa22.68■■□□□ 1.22
RCN1-206ENST00000530348 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
RCN1-206ENST00000530348 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
RCN1-206ENST00000530348 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
RCN1-206ENST00000530348 NACADO15069 1562 aa21.44■■□□□ 1.02
RCN1-206ENST00000530348 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
RCN1-206ENST00000530348 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
RCN1-206ENST00000530348 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
RCN1-206ENST00000530348 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
RCN1-206ENST00000530348 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
RCN1-206ENST00000530348 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
RCN1-206ENST00000530348 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
RCN1-206ENST00000530348 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
RCN1-206ENST00000530348 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
RCN1-206ENST00000530348 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
RCN1-206ENST00000530348 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
RCN1-206ENST00000530348 CC2D2AQ9P2K1 1620 aa20.4■□□□□ 0.86
RCN1-206ENST00000530348 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
RCN1-206ENST00000530348 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
RCN1-206ENST00000530348 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
RCN1-206ENST00000530348 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
RCN1-206ENST00000530348 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
RCN1-206ENST00000530348 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
RCN1-206ENST00000530348 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
RCN1-206ENST00000530348 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
RCN1-206ENST00000530348 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
RCN1-206ENST00000530348 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
RCN1-206ENST00000530348 NESP48681 1621 aa19.51■□□□□ 0.71
RCN1-206ENST00000530348 CUX2O14529 1486 aa19.43■□□□□ 0.7
RCN1-206ENST00000530348 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
RCN1-206ENST00000530348 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
RCN1-206ENST00000530348 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
RCN1-206ENST00000530348 WIZO95785 1651 aa19.31■□□□□ 0.68
RCN1-206ENST00000530348 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
RCN1-206ENST00000530348 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
RCN1-206ENST00000530348 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
RCN1-206ENST00000530348 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
RCN1-206ENST00000530348 CFTRP13569 1480 aa19.09■□□□□ 0.65
RCN1-206ENST00000530348 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
RCN1-206ENST00000530348 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
RCN1-206ENST00000530348 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
RCN1-206ENST00000530348 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.63
RCN1-206ENST00000530348 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
RCN1-206ENST00000530348 WDR62O43379 1518 aa18.97■□□□□ 0.63
RCN1-206ENST00000530348 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
RCN1-206ENST00000530348 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
RCN1-206ENST00000530348 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
RCN1-206ENST00000530348 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
RCN1-206ENST00000530348 IFT140Q96RY7 1462 aa18.66■□□□□ 0.58
RCN1-206ENST00000530348 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.58
RCN1-206ENST00000530348 ABCC8Q09428 1581 aa18.64■□□□□ 0.58
RCN1-206ENST00000530348 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
RCN1-206ENST00000530348 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
RCN1-206ENST00000530348 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
RCN1-206ENST00000530348 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
RCN1-206ENST00000530348 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
RCN1-206ENST00000530348 SOGA1O94964 1423 aa18.49■□□□□ 0.55
RCN1-206ENST00000530348 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
RCN1-206ENST00000530348 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
RCN1-206ENST00000530348 FBLN2P98095 1184 aa18.45■□□□□ 0.54
RCN1-206ENST00000530348 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
RCN1-206ENST00000530348 CUX1P39880 1505 aa18.41■□□□□ 0.54
RCN1-206ENST00000530348 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
RCN1-206ENST00000530348 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
RCN1-206ENST00000530348 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
RCN1-206ENST00000530348 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
RCN1-206ENST00000530348 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
RCN1-206ENST00000530348 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
RCN1-206ENST00000530348 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
RCN1-206ENST00000530348 RIMBP3CA6NJZ7 1639 aa18.26■□□□□ 0.51
RCN1-206ENST00000530348 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
RCN1-206ENST00000530348 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
RCN1-206ENST00000530348 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
RCN1-206ENST00000530348 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
RCN1-206ENST00000530348 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
RCN1-206ENST00000530348 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
RCN1-206ENST00000530348 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
RCN1-206ENST00000530348 CHD1O14646 1710 aa18.18■□□□□ 0.5
RCN1-206ENST00000530348 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
RCN1-206ENST00000530348 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
RCN1-206ENST00000530348 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
RCN1-206ENST00000530348 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.49
RCN1-206ENST00000530348 SYNJ1O43426 1573 aa18.08■□□□□ 0.48
RCN1-206ENST00000530348 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
RCN1-206ENST00000530348 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
RCN1-206ENST00000530348 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
RCN1-206ENST00000530348 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
RCN1-206ENST00000530348 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
RCN1-206ENST00000530348 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
RCN1-206ENST00000530348 NUP160Q12769 1436 aa17.97■□□□□ 0.47
RCN1-206ENST00000530348 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
RCN1-206ENST00000530348 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
RCN1-206ENST00000530348 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
RCN1-206ENST00000530348 IGF1RP08069 1367 aa17.91■□□□□ 0.46
RCN1-206ENST00000530348 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
RCN1-206ENST00000530348 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
RCN1-206ENST00000530348 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
RCN1-206ENST00000530348 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
RCN1-206ENST00000530348 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms