RNA–Protein interactions for RNA: ENST00000488209.1

VILL-210, Transcript of villin like, humanhuman

TSL 2

Gene VILL, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VILL-210ENST00000488209 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
VILL-210ENST00000488209 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
VILL-210ENST00000488209 ABCC9O60706 1549 aa41.6■■■■■ 4.25
VILL-210ENST00000488209 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
VILL-210ENST00000488209 NACADO15069 1562 aa39.84■■■■□ 3.97
VILL-210ENST00000488209 ZCCHC6Q5VYS8 1495 aaKnown RBP39.65■■■■□ 3.94
VILL-210ENST00000488209 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
VILL-210ENST00000488209 DCAF8L2P0C7V8 631 aa39.5■■■■□ 3.91
VILL-210ENST00000488209 DCAF1Q9Y4B6 1507 aa39.38■■■■□ 3.89
VILL-210ENST00000488209 UNC13AQ9UPW8 1703 aa39.2■■■■□ 3.87
VILL-210ENST00000488209 BICRAQ9NZM4 1560 aa38.91■■■■□ 3.82
VILL-210ENST00000488209 PABPN1Q86U42 306 aaKnown RBP eCLIP38.78■■■■□ 3.8
VILL-210ENST00000488209 SCRIBQ14160 1630 aa38.66■■■■□ 3.78
VILL-210ENST00000488209 DNAJC5BQ9UF47 199 aa38.44■■■■□ 3.74
VILL-210ENST00000488209 SHROOM4Q9ULL8 1493 aa38.33■■■■□ 3.73
VILL-210ENST00000488209 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
VILL-210ENST00000488209 CC2D2AQ9P2K1 1620 aa37.68■■■■□ 3.62
VILL-210ENST00000488209 CECR2Q9BXF3 1484 aa37.38■■■■□ 3.57
VILL-210ENST00000488209 SMARCA4P51532 1647 aa36.99■■■■□ 3.51
VILL-210ENST00000488209 BAZ1AQ9NRL2 1556 aaPredicted RBP36.84■■■■□ 3.49
VILL-210ENST00000488209 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
VILL-210ENST00000488209 NCAPD3P42695 1498 aa36.79■■■■□ 3.48
VILL-210ENST00000488209 MROH2BQ7Z745 1585 aa36.71■■■■□ 3.47
VILL-210ENST00000488209 SMARCA2P51531 1590 aa36.68■■■■□ 3.46
VILL-210ENST00000488209 PEG3Q9GZU2 1588 aa36.66■■■■□ 3.46
VILL-210ENST00000488209 HMGXB3Q12766 1538 aa36.63■■■■□ 3.45
VILL-210ENST00000488209 BAZ1BQ9UIG0 1483 aaKnown RBP36.41■■■■□ 3.42
VILL-210ENST00000488209 WIZO95785 1651 aa36.3■■■■□ 3.4
VILL-210ENST00000488209 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
VILL-210ENST00000488209 NESP48681 1621 aa36.03■■■■□ 3.36
VILL-210ENST00000488209 TOP2AP11388 1531 aaKnown RBP35.87■■■■□ 3.33
VILL-210ENST00000488209 LAMC3Q9Y6N6 1575 aa35.84■■■■□ 3.33
VILL-210ENST00000488209 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
VILL-210ENST00000488209 CADPSQ9ULU8 1353 aa35.65■■■■□ 3.3
VILL-210ENST00000488209 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
VILL-210ENST00000488209 THOC2Q8NI27 1593 aaKnown RBP35.58■■■■□ 3.29
VILL-210ENST00000488209 CUX2O14529 1486 aa35.54■■■■□ 3.28
VILL-210ENST00000488209 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
VILL-210ENST00000488209 CFTRP13569 1480 aa35.48■■■■□ 3.27
VILL-210ENST00000488209 CCDC88BA6NC98 1476 aa35.43■■■■□ 3.26
VILL-210ENST00000488209 FANCD2Q9BXW9 1451 aa35.27■■■■□ 3.24
VILL-210ENST00000488209 PRDM2Q13029 1718 aa35.23■■■■□ 3.23
VILL-210ENST00000488209 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
VILL-210ENST00000488209 CEP164Q9UPV0 1460 aa35.22■■■■□ 3.23
VILL-210ENST00000488209 WDR62O43379 1518 aa35.2■■■■□ 3.23
VILL-210ENST00000488209 URB2Q14146 1524 aaKnown RBP35.02■■■■□ 3.2
VILL-210ENST00000488209 SUPT5HO00267 1087 aaKnown RBP34.89■■■■□ 3.18
VILL-210ENST00000488209 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
VILL-210ENST00000488209 DNMBPQ6XZF7 1577 aa34.66■■■■□ 3.14
VILL-210ENST00000488209 DNAJC5Q9H3Z4 198 aa34.62■■■■□ 3.13
VILL-210ENST00000488209 ABCC8Q09428 1581 aa34.57■■■■□ 3.12
VILL-210ENST00000488209 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
VILL-210ENST00000488209 CUX1P39880 1505 aa34.45■■■■□ 3.11
VILL-210ENST00000488209 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
VILL-210ENST00000488209 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
VILL-210ENST00000488209 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
VILL-210ENST00000488209 EIF4G3O43432 1585 aaKnown RBP34.32■■■■□ 3.08
VILL-210ENST00000488209 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
VILL-210ENST00000488209 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
VILL-210ENST00000488209 SOGA1O94964 1423 aa34.17■■■■□ 3.06
VILL-210ENST00000488209 AQRO60306 1485 aaKnown RBP eCLIP34.16■■■■□ 3.069e-8■■■■■ 30.5
VILL-210ENST00000488209 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
VILL-210ENST00000488209 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
VILL-210ENST00000488209 BIVM-ERCC5R4GMW8 1640 aa34.11■■■■□ 3.05
VILL-210ENST00000488209 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
VILL-210ENST00000488209 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
VILL-210ENST00000488209 TDRD9Q8NDG6 1382 aaKnown RBP34.03■■■■□ 3.04
VILL-210ENST00000488209 ABCA10Q8WWZ4 1543 aa33.97■■■■□ 3.03
VILL-210ENST00000488209 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
VILL-210ENST00000488209 CHD1O14646 1710 aa33.92■■■■□ 3.02
VILL-210ENST00000488209 OSCARQ8IYS5 282 aa33.88■■■■□ 3.01
VILL-210ENST00000488209 SNAPC4Q5SXM2 1469 aa33.86■■■■□ 3.01
VILL-210ENST00000488209 PBRM1Q86U86 1689 aa33.85■■■■□ 3.01
VILL-210ENST00000488209 GRIN2BQ13224 1484 aa33.82■■■■□ 3.01
VILL-210ENST00000488209 GAPVD1Q14C86 1478 aa33.81■■■■□ 3
VILL-210ENST00000488209 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
VILL-210ENST00000488209 SYNJ2O15056 1496 aa33.65■■■□□ 2.98
VILL-210ENST00000488209 ADAMTS12P58397 1594 aa33.6■■■□□ 2.97
VILL-210ENST00000488209 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
VILL-210ENST00000488209 RIMBP3CA6NJZ7 1639 aa33.58■■■□□ 2.97
VILL-210ENST00000488209 RIMBP3BA6NNM3 1639 aa33.58■■■□□ 2.97
VILL-210ENST00000488209 RIMBP3Q9UFD9 1639 aa33.58■■■□□ 2.97
VILL-210ENST00000488209 FBLN2P98095 1184 aa33.57■■■□□ 2.96
VILL-210ENST00000488209 ARHGEF11O15085 1522 aa33.53■■■□□ 2.96
VILL-210ENST00000488209 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
VILL-210ENST00000488209 CHMP7Q8WUX9 453 aaPredicted RBP33.48■■■□□ 2.95
VILL-210ENST00000488209 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
VILL-210ENST00000488209 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
VILL-210ENST00000488209 CEP170Q5SW79 1584 aa33.37■■■□□ 2.93
VILL-210ENST00000488209 NUP160Q12769 1436 aa33.34■■■□□ 2.93
VILL-210ENST00000488209 ARAP1Q96P48 1450 aa33.3■■■□□ 2.92
VILL-210ENST00000488209 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
VILL-210ENST00000488209 KIF27Q86VH2 1401 aa33.28■■■□□ 2.92
VILL-210ENST00000488209 IGF1RP08069 1367 aa33.25■■■□□ 2.91
VILL-210ENST00000488209 CUL7Q14999 1698 aa33.2■■■□□ 2.9
VILL-210ENST00000488209 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
VILL-210ENST00000488209 ERCC6L2Q5T890 1561 aa33.14■■■□□ 2.9
VILL-210ENST00000488209 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
VILL-210ENST00000488209 CYB5RLQ6IPT4 315 aa33.05■■■□□ 2.88
VILL-210ENST00000488209 CARMIL1Q5VZK9 1371 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms