RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
TOM1L1-210ENST00000572158 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
TOM1L1-210ENST00000572158 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
TOM1L1-210ENST00000572158 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
TOM1L1-210ENST00000572158 ABCC9O60706 1549 aa19.5■□□□□ 0.71
TOM1L1-210ENST00000572158 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
TOM1L1-210ENST00000572158 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
TOM1L1-210ENST00000572158 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
TOM1L1-210ENST00000572158 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
TOM1L1-210ENST00000572158 NACADO15069 1562 aa18.95■□□□□ 0.62
TOM1L1-210ENST00000572158 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
TOM1L1-210ENST00000572158 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
TOM1L1-210ENST00000572158 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
TOM1L1-210ENST00000572158 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
TOM1L1-210ENST00000572158 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
TOM1L1-210ENST00000572158 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
TOM1L1-210ENST00000572158 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
TOM1L1-210ENST00000572158 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
TOM1L1-210ENST00000572158 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
TOM1L1-210ENST00000572158 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
TOM1L1-210ENST00000572158 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
TOM1L1-210ENST00000572158 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
TOM1L1-210ENST00000572158 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
TOM1L1-210ENST00000572158 RSF1Q96T23 1441 aaPredicted RBP17.74■□□□□ 0.43
TOM1L1-210ENST00000572158 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
TOM1L1-210ENST00000572158 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
TOM1L1-210ENST00000572158 WIZO95785 1651 aa17.62■□□□□ 0.41
TOM1L1-210ENST00000572158 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
TOM1L1-210ENST00000572158 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
TOM1L1-210ENST00000572158 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
TOM1L1-210ENST00000572158 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
TOM1L1-210ENST00000572158 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
TOM1L1-210ENST00000572158 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
TOM1L1-210ENST00000572158 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
TOM1L1-210ENST00000572158 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
TOM1L1-210ENST00000572158 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
TOM1L1-210ENST00000572158 FOXD1Q16676 465 aa17.19■□□□□ 0.34
TOM1L1-210ENST00000572158 NESP48681 1621 aa17.04■□□□□ 0.32
TOM1L1-210ENST00000572158 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
TOM1L1-210ENST00000572158 CFTRP13569 1480 aa17.02■□□□□ 0.32
TOM1L1-210ENST00000572158 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
TOM1L1-210ENST00000572158 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
TOM1L1-210ENST00000572158 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.29
TOM1L1-210ENST00000572158 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
TOM1L1-210ENST00000572158 KIF21AQ7Z4S6 1674 aa16.8■□□□□ 0.28
TOM1L1-210ENST00000572158 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
TOM1L1-210ENST00000572158 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
TOM1L1-210ENST00000572158 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
TOM1L1-210ENST00000572158 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
TOM1L1-210ENST00000572158 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
TOM1L1-210ENST00000572158 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
TOM1L1-210ENST00000572158 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
TOM1L1-210ENST00000572158 CUX1P39880 1505 aa16.66■□□□□ 0.26
TOM1L1-210ENST00000572158 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
TOM1L1-210ENST00000572158 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
TOM1L1-210ENST00000572158 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
TOM1L1-210ENST00000572158 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
TOM1L1-210ENST00000572158 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
TOM1L1-210ENST00000572158 WDR62O43379 1518 aa16.59■□□□□ 0.25
TOM1L1-210ENST00000572158 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TOM1L1-210ENST00000572158 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.25
TOM1L1-210ENST00000572158 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
TOM1L1-210ENST00000572158 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.24
TOM1L1-210ENST00000572158 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
TOM1L1-210ENST00000572158 CUX2O14529 1486 aa16.49■□□□□ 0.23
TOM1L1-210ENST00000572158 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
TOM1L1-210ENST00000572158 SOGA1O94964 1423 aa16.43■□□□□ 0.22
TOM1L1-210ENST00000572158 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
TOM1L1-210ENST00000572158 IFT140Q96RY7 1462 aa16.38■□□□□ 0.21
TOM1L1-210ENST00000572158 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
TOM1L1-210ENST00000572158 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
TOM1L1-210ENST00000572158 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
TOM1L1-210ENST00000572158 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
TOM1L1-210ENST00000572158 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
TOM1L1-210ENST00000572158 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
TOM1L1-210ENST00000572158 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
TOM1L1-210ENST00000572158 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
TOM1L1-210ENST00000572158 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
TOM1L1-210ENST00000572158 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
TOM1L1-210ENST00000572158 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
TOM1L1-210ENST00000572158 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
TOM1L1-210ENST00000572158 ADRA2BP18089 450 aa16.22■□□□□ 0.19
TOM1L1-210ENST00000572158 IGF1RP08069 1367 aa16.22■□□□□ 0.19
TOM1L1-210ENST00000572158 EEA1Q15075 1411 aa16.18■□□□□ 0.18
TOM1L1-210ENST00000572158 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
TOM1L1-210ENST00000572158 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
TOM1L1-210ENST00000572158 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
TOM1L1-210ENST00000572158 ERICH3Q5RHP9 1530 aa16.15■□□□□ 0.18
TOM1L1-210ENST00000572158 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
TOM1L1-210ENST00000572158 SNAPC4Q5SXM2 1469 aa16.12■□□□□ 0.17
TOM1L1-210ENST00000572158 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
TOM1L1-210ENST00000572158 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
TOM1L1-210ENST00000572158 ADAMTS12P58397 1594 aa16.08■□□□□ 0.16
TOM1L1-210ENST00000572158 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
TOM1L1-210ENST00000572158 CUL7Q14999 1698 aa16.06■□□□□ 0.16
TOM1L1-210ENST00000572158 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
TOM1L1-210ENST00000572158 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
TOM1L1-210ENST00000572158 MSH5O43196 834 aa16.04■□□□□ 0.16
TOM1L1-210ENST00000572158 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
TOM1L1-210ENST00000572158 KIF21BO75037 1637 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms