RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 AEBP2Q6ZN18 517 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-220ENST00000575333 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
TOM1L1-220ENST00000575333 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
TOM1L1-220ENST00000575333 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
TOM1L1-220ENST00000575333 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
TOM1L1-220ENST00000575333 FOXD1Q16676 465 aa15.82■□□□□ 0.12
TOM1L1-220ENST00000575333 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
TOM1L1-220ENST00000575333 ADRA2BP18089 450 aa15.4■□□□□ 0.06
TOM1L1-220ENST00000575333 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
TOM1L1-220ENST00000575333 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
TOM1L1-220ENST00000575333 MSH5O43196 834 aa14.43□□□□□ -0.1
TOM1L1-220ENST00000575333 MYT1Q01538 1121 aa14.3□□□□□ -0.12
TOM1L1-220ENST00000575333 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
TOM1L1-220ENST00000575333 KCNA4P22459 653 aa14.24□□□□□ -0.13
TOM1L1-220ENST00000575333 NISCHQ9Y2I1 1504 aa14.18□□□□□ -0.14
TOM1L1-220ENST00000575333 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
TOM1L1-220ENST00000575333 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
TOM1L1-220ENST00000575333 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
TOM1L1-220ENST00000575333 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
TOM1L1-220ENST00000575333 NPM3O75607 178 aaKnown RBP13.79□□□□□ -0.2
TOM1L1-220ENST00000575333 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.21
TOM1L1-220ENST00000575333 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
TOM1L1-220ENST00000575333 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
TOM1L1-220ENST00000575333 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
TOM1L1-220ENST00000575333 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
TOM1L1-220ENST00000575333 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
TOM1L1-220ENST00000575333 HRCP23327 699 aa13.38□□□□□ -0.27
TOM1L1-220ENST00000575333 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
TOM1L1-220ENST00000575333 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
TOM1L1-220ENST00000575333 ZBTB22O15209 634 aa13.13□□□□□ -0.31
TOM1L1-220ENST00000575333 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
TOM1L1-220ENST00000575333 SLC4A2P04920 1241 aa13□□□□□ -0.33
TOM1L1-220ENST00000575333 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
TOM1L1-220ENST00000575333 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
TOM1L1-220ENST00000575333 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
TOM1L1-220ENST00000575333 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
TOM1L1-220ENST00000575333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.364e-8■■□□□ 13.9
TOM1L1-220ENST00000575333 APLP2Q06481 763 aa12.76□□□□□ -0.37
TOM1L1-220ENST00000575333 BCL11AQ9H165 835 aa12.72□□□□□ -0.37
TOM1L1-220ENST00000575333 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
TOM1L1-220ENST00000575333 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
TOM1L1-220ENST00000575333 PPARGC1BQ86YN6 1023 aaKnown RBP12.65□□□□□ -0.38
TOM1L1-220ENST00000575333 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
TOM1L1-220ENST00000575333 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
TOM1L1-220ENST00000575333 CCDC180Q9P1Z9 1646 aa12.54□□□□□ -0.4
TOM1L1-220ENST00000575333 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.41
TOM1L1-220ENST00000575333 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
TOM1L1-220ENST00000575333 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
TOM1L1-220ENST00000575333 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
TOM1L1-220ENST00000575333 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.42
TOM1L1-220ENST00000575333 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-220ENST00000575333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-220ENST00000575333 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-220ENST00000575333 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
TOM1L1-220ENST00000575333 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-220ENST00000575333 DCAF1Q9Y4B6 1507 aa12.36□□□□□ -0.43
TOM1L1-220ENST00000575333 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
TOM1L1-220ENST00000575333 ANP32EQ9BTT0 268 aa12.3□□□□□ -0.44
TOM1L1-220ENST00000575333 NEUROD1Q13562 356 aa12.27□□□□□ -0.44
TOM1L1-220ENST00000575333 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
TOM1L1-220ENST00000575333 C1QBPQ07021 282 aaKnown RBP12.25□□□□□ -0.45
TOM1L1-220ENST00000575333 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
TOM1L1-220ENST00000575333 ABCC9O60706 1549 aa12.21□□□□□ -0.46
TOM1L1-220ENST00000575333 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-220ENST00000575333 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-220ENST00000575333 CAPN15O75808 1086 aa12.16□□□□□ -0.46
TOM1L1-220ENST00000575333 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-220ENST00000575333 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
TOM1L1-220ENST00000575333 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
TOM1L1-220ENST00000575333 POLA2Q14181 598 aa12.01□□□□□ -0.49
TOM1L1-220ENST00000575333 ABCB7O75027 752 aa11.99□□□□□ -0.49
TOM1L1-220ENST00000575333 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
TOM1L1-220ENST00000575333 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.49
TOM1L1-220ENST00000575333 UBE2Q2Q8WVN8 375 aa11.93□□□□□ -0.5
TOM1L1-220ENST00000575333 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
TOM1L1-220ENST00000575333 DSG3P32926 999 aa11.91□□□□□ -0.5
TOM1L1-220ENST00000575333 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
TOM1L1-220ENST00000575333 FKBP8Q14318 412 aa11.89□□□□□ -0.51
TOM1L1-220ENST00000575333 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
TOM1L1-220ENST00000575333 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
TOM1L1-220ENST00000575333 ZCCHC6Q5VYS8 1495 aaKnown RBP11.82□□□□□ -0.52
TOM1L1-220ENST00000575333 ERICH6BQ5W0A0 696 aa11.82□□□□□ -0.52
TOM1L1-220ENST00000575333 FBLN2P98095 1184 aa11.79□□□□□ -0.52
TOM1L1-220ENST00000575333 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
TOM1L1-220ENST00000575333 NACADO15069 1562 aa11.76□□□□□ -0.53
TOM1L1-220ENST00000575333 RB1CC1Q8TDY2 1594 aa11.76□□□□□ -0.53
TOM1L1-220ENST00000575333 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
TOM1L1-220ENST00000575333 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
TOM1L1-220ENST00000575333 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
TOM1L1-220ENST00000575333 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
TOM1L1-220ENST00000575333 SUPT16HQ9Y5B9 1047 aaKnown RBP11.62□□□□□ -0.55
TOM1L1-220ENST00000575333 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
TOM1L1-220ENST00000575333 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
TOM1L1-220ENST00000575333 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.57
TOM1L1-220ENST00000575333 PODXL2Q9NZ53 605 aa11.51□□□□□ -0.57
TOM1L1-220ENST00000575333 SCRIBQ14160 1630 aa11.51□□□□□ -0.57
TOM1L1-220ENST00000575333 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
TOM1L1-220ENST00000575333 PROM2Q8N271 834 aa11.49□□□□□ -0.57
TOM1L1-220ENST00000575333 ZNF316A6NFI3 1004 aaPredicted RBP11.49□□□□□ -0.57
TOM1L1-220ENST00000575333 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms