RNA–Protein interactions for RNA: ENST00000302053.7

FGA-201, Transcript of fibrinogen alpha chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FGA, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGA-201ENST00000302053 NISCHQ9Y2I1 1504 aa13.72□□□□□ -0.21
FGA-201ENST00000302053 SHROOM4Q9ULL8 1493 aa12.09□□□□□ -0.47
FGA-201ENST00000302053 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
FGA-201ENST00000302053 HRCP23327 699 aa11.73□□□□□ -0.53
FGA-201ENST00000302053 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
FGA-201ENST00000302053 CHIC1Q5VXU3 224 aa11.68□□□□□ -0.54
FGA-201ENST00000302053 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
FGA-201ENST00000302053 ZCCHC6Q5VYS8 1495 aaKnown RBP11.6□□□□□ -0.55
FGA-201ENST00000302053 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
FGA-201ENST00000302053 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
FGA-201ENST00000302053 CCDC180Q9P1Z9 1646 aa11.42□□□□□ -0.58
FGA-201ENST00000302053 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
FGA-201ENST00000302053 DCAF1Q9Y4B6 1507 aa11.34□□□□□ -0.59
FGA-201ENST00000302053 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
FGA-201ENST00000302053 AEBP2Q6ZN18 517 aaPredicted RBP11.31□□□□□ -0.6
FGA-201ENST00000302053 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
FGA-201ENST00000302053 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
FGA-201ENST00000302053 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
FGA-201ENST00000302053 EHMT2Q96KQ7 1210 aa11.1□□□□□ -0.63
FGA-201ENST00000302053 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
FGA-201ENST00000302053 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
FGA-201ENST00000302053 ABCC9O60706 1549 aa10.96□□□□□ -0.66
FGA-201ENST00000302053 SCAF1Q9H7N4 1312 aaKnown RBP10.94□□□□□ -0.66
FGA-201ENST00000302053 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
FGA-201ENST00000302053 SCRIBQ14160 1630 aa10.9□□□□□ -0.66
FGA-201ENST00000302053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
FGA-201ENST00000302053 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
FGA-201ENST00000302053 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
FGA-201ENST00000302053 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
FGA-201ENST00000302053 TTBK1Q5TCY1 1321 aaPredicted RBP10.79□□□□□ -0.68
FGA-201ENST00000302053 DIEXFQ68CQ4 756 aaKnown RBP10.77□□□□□ -0.68
FGA-201ENST00000302053 NEUROD1Q13562 356 aa10.76□□□□□ -0.69
FGA-201ENST00000302053 CECR2Q9BXF3 1484 aa10.73□□□□□ -0.69
FGA-201ENST00000302053 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
FGA-201ENST00000302053 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
FGA-201ENST00000302053 UBTFP17480 764 aaKnown RBP10.65□□□□□ -0.7
FGA-201ENST00000302053 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
FGA-201ENST00000302053 NACADO15069 1562 aa10.61□□□□□ -0.71
FGA-201ENST00000302053 YTHDC1Q96MU7 727 aaKnown RBP10.61□□□□□ -0.71
FGA-201ENST00000302053 MYT1Q01538 1121 aa10.61□□□□□ -0.71
FGA-201ENST00000302053 WIZO95785 1651 aa10.61□□□□□ -0.71
FGA-201ENST00000302053 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
FGA-201ENST00000302053 CSRNP3Q8WYN3 585 aa10.57□□□□□ -0.72
FGA-201ENST00000302053 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
FGA-201ENST00000302053 TNIKQ9UKE5 1360 aa10.55□□□□□ -0.72
FGA-201ENST00000302053 HNRNPUL2Q1KMD3 747 aaKnown RBP10.54□□□□□ -0.72
FGA-201ENST00000302053 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
FGA-201ENST00000302053 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.72
FGA-201ENST00000302053 APLP2Q06481 763 aa10.52□□□□□ -0.73
FGA-201ENST00000302053 SOGA1O94964 1423 aa10.51□□□□□ -0.73
FGA-201ENST00000302053 ABCC8Q09428 1581 aa10.51□□□□□ -0.73
FGA-201ENST00000302053 MIER1Q8N108 512 aa10.48□□□□□ -0.73
FGA-201ENST00000302053 EEA1Q15075 1411 aa10.48□□□□□ -0.73
FGA-201ENST00000302053 TOP2AP11388 1531 aaKnown RBP10.44□□□□□ -0.74
FGA-201ENST00000302053 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
FGA-201ENST00000302053 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
FGA-201ENST00000302053 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
FGA-201ENST00000302053 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
FGA-201ENST00000302053 SMARCA2P51531 1590 aa10.38□□□□□ -0.75
FGA-201ENST00000302053 CLIP1P30622 1438 aa10.37□□□□□ -0.75
FGA-201ENST00000302053 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
FGA-201ENST00000302053 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
FGA-201ENST00000302053 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
FGA-201ENST00000302053 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
FGA-201ENST00000302053 CLSPNQ9HAW4 1339 aa10.27□□□□□ -0.77
FGA-201ENST00000302053 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
FGA-201ENST00000302053 SUPT16HQ9Y5B9 1047 aaKnown RBP10.22□□□□□ -0.77
FGA-201ENST00000302053 ITGAEP38570 1179 aa10.22□□□□□ -0.77
FGA-201ENST00000302053 KIF21BO75037 1637 aa10.22□□□□□ -0.77
FGA-201ENST00000302053 BAZ1BQ9UIG0 1483 aaKnown RBP10.21□□□□□ -0.77
FGA-201ENST00000302053 DHX57Q6P158 1386 aaKnown RBP10.2□□□□□ -0.78
FGA-201ENST00000302053 SYNJ1O43426 1573 aa10.19□□□□□ -0.78
FGA-201ENST00000302053 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
FGA-201ENST00000302053 BCANQ96GW7 911 aa10.11□□□□□ -0.79
FGA-201ENST00000302053 ATAD2BQ9ULI0 1458 aa10.11□□□□□ -0.79
FGA-201ENST00000302053 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
FGA-201ENST00000302053 CCNB3Q8WWL7 1395 aa10.1□□□□□ -0.79
FGA-201ENST00000302053 NEFLP07196 543 aa10.09□□□□□ -0.79
FGA-201ENST00000302053 UNC13AQ9UPW8 1703 aa10.09□□□□□ -0.79
FGA-201ENST00000302053 PEG3Q9GZU2 1588 aa10.08□□□□□ -0.8
FGA-201ENST00000302053 DDX10Q13206 875 aaKnown RBP10.08□□□□□ -0.8
FGA-201ENST00000302053 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
FGA-201ENST00000302053 FKBP8Q14318 412 aa10.07□□□□□ -0.8
FGA-201ENST00000302053 ARAP1Q96P48 1450 aa10.06□□□□□ -0.8
FGA-201ENST00000302053 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
FGA-201ENST00000302053 RRBP1Q9P2E9 1410 aaKnown RBP10.06□□□□□ -0.8
FGA-201ENST00000302053 PRXQ9BXM0 1461 aa10.05□□□□□ -0.8
FGA-201ENST00000302053 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
FGA-201ENST00000302053 FAM50AQ14320 339 aaKnown RBP10.05□□□□□ -0.8
FGA-201ENST00000302053 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
FGA-201ENST00000302053 BICRAQ9NZM4 1560 aa10.04□□□□□ -0.8
FGA-201ENST00000302053 ERICH3Q5RHP9 1530 aa10.04□□□□□ -0.8
FGA-201ENST00000302053 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
FGA-201ENST00000302053 TOP2BQ02880 1626 aa10.03□□□□□ -0.8
FGA-201ENST00000302053 SIN3AQ96ST3 1273 aa10.01□□□□□ -0.81
FGA-201ENST00000302053 ANP32CO43423 234 aa10.01□□□□□ -0.81
FGA-201ENST00000302053 SETD5Q9C0A6 1442 aa9.99□□□□□ -0.81
FGA-201ENST00000302053 TRIM52Q96A61 297 aa9.98□□□□□ -0.81
FGA-201ENST00000302053 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
FGA-201ENST00000302053 CUX2O14529 1486 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms