RNA–Protein interactions for RNA: ENST00000570965.5

TOM1L1-207, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1L1, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-207ENST00000570965 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
TOM1L1-207ENST00000570965 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
TOM1L1-207ENST00000570965 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
TOM1L1-207ENST00000570965 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
TOM1L1-207ENST00000570965 FOXD1Q16676 465 aa13.21□□□□□ -0.29
TOM1L1-207ENST00000570965 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
TOM1L1-207ENST00000570965 MSH5O43196 834 aa12.54□□□□□ -0.4
TOM1L1-207ENST00000570965 PIAS4Q8N2W9 510 aaPredicted RBP12.24□□□□□ -0.45
TOM1L1-207ENST00000570965 PLPPR3Q6T4P5 718 aa12.12□□□□□ -0.47
TOM1L1-207ENST00000570965 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
TOM1L1-207ENST00000570965 ADRA2BP18089 450 aa11.99□□□□□ -0.49
TOM1L1-207ENST00000570965 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
TOM1L1-207ENST00000570965 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
TOM1L1-207ENST00000570965 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
TOM1L1-207ENST00000570965 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
TOM1L1-207ENST00000570965 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
TOM1L1-207ENST00000570965 HOXD11P31277 338 aaPredicted RBP10.65□□□□□ -0.7
TOM1L1-207ENST00000570965 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
TOM1L1-207ENST00000570965 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
TOM1L1-207ENST00000570965 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
TOM1L1-207ENST00000570965 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
TOM1L1-207ENST00000570965 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
TOM1L1-207ENST00000570965 DNAJC5BQ9UF47 199 aa10.42□□□□□ -0.74
TOM1L1-207ENST00000570965 POTEHQ6S545 545 aa10.13□□□□□ -0.79
TOM1L1-207ENST00000570965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.799e-8■□□□□ 10.2
TOM1L1-207ENST00000570965 NCBP3Q53F19 620 aaKnown RBP10.08□□□□□ -0.8
TOM1L1-207ENST00000570965 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
TOM1L1-207ENST00000570965 DSG3P32926 999 aa9.85□□□□□ -0.83
TOM1L1-207ENST00000570965 U3KPZ7 1027 aaPredicted RBP9.85□□□□□ -0.83
TOM1L1-207ENST00000570965 CAPN15O75808 1086 aa9.79□□□□□ -0.84
TOM1L1-207ENST00000570965 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
TOM1L1-207ENST00000570965 APLP2Q06481 763 aa9.6□□□□□ -0.87
TOM1L1-207ENST00000570965 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
TOM1L1-207ENST00000570965 SLC4A2P04920 1241 aa9.54□□□□□ -0.88
TOM1L1-207ENST00000570965 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
TOM1L1-207ENST00000570965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
TOM1L1-207ENST00000570965 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-207ENST00000570965 ABCB7O75027 752 aa9.5□□□□□ -0.89
TOM1L1-207ENST00000570965 RBM42Q9BTD8 480 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-207ENST00000570965 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
TOM1L1-207ENST00000570965 KCNA4P22459 653 aa9.37□□□□□ -0.91
TOM1L1-207ENST00000570965 CHRDL2Q6WN34 429 aa9.33□□□□□ -0.92
TOM1L1-207ENST00000570965 POLA2Q14181 598 aa9.23□□□□□ -0.93
TOM1L1-207ENST00000570965 SP7Q8TDD2 431 aaPredicted RBP9.18□□□□□ -0.94
TOM1L1-207ENST00000570965 MYCNP04198 464 aaPredicted RBP9.17□□□□□ -0.94
TOM1L1-207ENST00000570965 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
TOM1L1-207ENST00000570965 ZBTB12Q9Y330 459 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-207ENST00000570965 REM2Q8IYK8 340 aaPredicted RBP9.03□□□□□ -0.96
TOM1L1-207ENST00000570965 PIP4P2Q8N4L2 257 aa9.03□□□□□ -0.96
TOM1L1-207ENST00000570965 HAX1O00165 279 aa8.96□□□□□ -0.98
TOM1L1-207ENST00000570965 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
TOM1L1-207ENST00000570965 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
TOM1L1-207ENST00000570965 PITPNM1O00562 1244 aa8.92□□□□□ -0.98
TOM1L1-207ENST00000570965 OSCARQ8IYS5 282 aa8.92□□□□□ -0.98
TOM1L1-207ENST00000570965 FOXD4L1Q9NU39 408 aa8.88□□□□□ -0.99
TOM1L1-207ENST00000570965 EVX2Q03828 476 aa8.8□□□□□ -1
TOM1L1-207ENST00000570965 SLC4A1APQ9BWU0 796 aaKnown RBP8.79□□□□□ -1
TOM1L1-207ENST00000570965 SPDYE2BA6NHP3 402 aa8.75□□□□□ -1.01
TOM1L1-207ENST00000570965 SPDYE6P0CI01 402 aa8.75□□□□□ -1.01
TOM1L1-207ENST00000570965 SPDYE2Q495Y8 402 aa8.75□□□□□ -1.01
TOM1L1-207ENST00000570965 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
TOM1L1-207ENST00000570965 PRKAR2AP13861 404 aaKnown RBP8.68□□□□□ -1.02
TOM1L1-207ENST00000570965 C19orf67A6NJJ6 358 aa8.67□□□□□ -1.02
TOM1L1-207ENST00000570965 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
TOM1L1-207ENST00000570965 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
TOM1L1-207ENST00000570965 FBLN2P98095 1184 aa8.66□□□□□ -1.02
TOM1L1-207ENST00000570965 GABBR2O75899 941 aa8.62□□□□□ -1.03
TOM1L1-207ENST00000570965 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
TOM1L1-207ENST00000570965 ZBTB22O15209 634 aa8.6□□□□□ -1.03
TOM1L1-207ENST00000570965 LHX8Q68G74 356 aa8.6□□□□□ -1.03
TOM1L1-207ENST00000570965 SSUH2Q9Y2M2 353 aa8.58□□□□□ -1.04
TOM1L1-207ENST00000570965 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
TOM1L1-207ENST00000570965 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
TOM1L1-207ENST00000570965 CHADLQ6NUI6 762 aa8.48□□□□□ -1.05
TOM1L1-207ENST00000570965 PRR29P0C7W0 189 aa8.47□□□□□ -1.05
TOM1L1-207ENST00000570965 CLCN6P51797 869 aa8.46□□□□□ -1.06
TOM1L1-207ENST00000570965 EHMT2Q96KQ7 1210 aa8.45□□□□□ -1.06
TOM1L1-207ENST00000570965 POTEIP0CG38 1075 aa8.42□□□□□ -1.06
TOM1L1-207ENST00000570965 PABPN1Q86U42 306 aaKnown RBP eCLIP8.4□□□□□ -1.06
TOM1L1-207ENST00000570965 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
TOM1L1-207ENST00000570965 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
TOM1L1-207ENST00000570965 DCBLD2Q96PD2 775 aa8.3□□□□□ -1.08
TOM1L1-207ENST00000570965 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-207ENST00000570965 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
TOM1L1-207ENST00000570965 CSRNP3Q8WYN3 585 aa8.18□□□□□ -1.1
TOM1L1-207ENST00000570965 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
TOM1L1-207ENST00000570965 CREBZFQ9NS37 354 aa8.17□□□□□ -1.1
TOM1L1-207ENST00000570965 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
TOM1L1-207ENST00000570965 GALR2O43603 387 aaPredicted RBP8.15□□□□□ -1.1
TOM1L1-207ENST00000570965 POTEB2H3BUK9 544 aa8.12□□□□□ -1.11
TOM1L1-207ENST00000570965 POTEMA6NI47 508 aa8.09□□□□□ -1.11
TOM1L1-207ENST00000570965 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
TOM1L1-207ENST00000570965 PCDH10Q9P2E7 1040 aa8.08□□□□□ -1.12
TOM1L1-207ENST00000570965 POTEGQ6S5H5 508 aa8.07□□□□□ -1.12
TOM1L1-207ENST00000570965 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
TOM1L1-207ENST00000570965 NPM1P06748 294 aaKnown RBP eCLIP8.03□□□□□ -1.12
TOM1L1-207ENST00000570965 PELP1Q8IZL8 1130 aaKnown RBP8.03□□□□□ -1.12
TOM1L1-207ENST00000570965 ASTLQ6HA08 431 aaPredicted RBP8.01□□□□□ -1.13
TOM1L1-207ENST00000570965 C7P10643 843 aa8□□□□□ -1.13
TOM1L1-207ENST00000570965 MNX1P50219 401 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms