RNA–Protein interactions for RNA: ENST00000348161.8

TOM1L1-201, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-201ENST00000348161 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
TOM1L1-201ENST00000348161 CCDC180Q9P1Z9 1646 aa32.17■■■□□ 2.74
TOM1L1-201ENST00000348161 ABCC9O60706 1549 aa31.33■■■□□ 2.61
TOM1L1-201ENST00000348161 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
TOM1L1-201ENST00000348161 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
TOM1L1-201ENST00000348161 NACADO15069 1562 aa30.27■■■□□ 2.44
TOM1L1-201ENST00000348161 RB1CC1Q8TDY2 1594 aa30.23■■■□□ 2.43
TOM1L1-201ENST00000348161 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
TOM1L1-201ENST00000348161 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
TOM1L1-201ENST00000348161 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
TOM1L1-201ENST00000348161 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
TOM1L1-201ENST00000348161 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
TOM1L1-201ENST00000348161 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
TOM1L1-201ENST00000348161 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
TOM1L1-201ENST00000348161 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
TOM1L1-201ENST00000348161 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
TOM1L1-201ENST00000348161 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
TOM1L1-201ENST00000348161 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
TOM1L1-201ENST00000348161 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
TOM1L1-201ENST00000348161 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
TOM1L1-201ENST00000348161 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
TOM1L1-201ENST00000348161 ATAD2BQ9ULI0 1458 aa28■■■□□ 2.07
TOM1L1-201ENST00000348161 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
TOM1L1-201ENST00000348161 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
TOM1L1-201ENST00000348161 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
TOM1L1-201ENST00000348161 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
TOM1L1-201ENST00000348161 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
TOM1L1-201ENST00000348161 HMGXB3Q12766 1538 aa27.79■■■□□ 2.04
TOM1L1-201ENST00000348161 WIZO95785 1651 aa27.75■■■□□ 2.03
TOM1L1-201ENST00000348161 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
TOM1L1-201ENST00000348161 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
TOM1L1-201ENST00000348161 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
TOM1L1-201ENST00000348161 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.95
TOM1L1-201ENST00000348161 NESP48681 1621 aa27.16■■□□□ 1.94
TOM1L1-201ENST00000348161 LAMC3Q9Y6N6 1575 aa27.13■■□□□ 1.93
TOM1L1-201ENST00000348161 CFTRP13569 1480 aa27.06■■□□□ 1.92
TOM1L1-201ENST00000348161 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
TOM1L1-201ENST00000348161 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
TOM1L1-201ENST00000348161 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
TOM1L1-201ENST00000348161 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
TOM1L1-201ENST00000348161 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
TOM1L1-201ENST00000348161 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
TOM1L1-201ENST00000348161 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
TOM1L1-201ENST00000348161 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
TOM1L1-201ENST00000348161 CUX2O14529 1486 aa26.58■■□□□ 1.85
TOM1L1-201ENST00000348161 WDR62O43379 1518 aa26.53■■□□□ 1.84
TOM1L1-201ENST00000348161 URB2Q14146 1524 aaKnown RBP26.51■■□□□ 1.83
TOM1L1-201ENST00000348161 ABCC8Q09428 1581 aa26.51■■□□□ 1.83
TOM1L1-201ENST00000348161 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
TOM1L1-201ENST00000348161 DNMBPQ6XZF7 1577 aa26.4■■□□□ 1.82
TOM1L1-201ENST00000348161 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
TOM1L1-201ENST00000348161 CUX1P39880 1505 aa26.31■■□□□ 1.8
TOM1L1-201ENST00000348161 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
TOM1L1-201ENST00000348161 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
TOM1L1-201ENST00000348161 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
TOM1L1-201ENST00000348161 SOGA1O94964 1423 aa26.2■■□□□ 1.79
TOM1L1-201ENST00000348161 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
TOM1L1-201ENST00000348161 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
TOM1L1-201ENST00000348161 RAD54L2Q9Y4B4 1467 aa26.13■■□□□ 1.77
TOM1L1-201ENST00000348161 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
TOM1L1-201ENST00000348161 TARBP1Q13395 1621 aaKnown RBP26.05■■□□□ 1.76
TOM1L1-201ENST00000348161 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
TOM1L1-201ENST00000348161 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
TOM1L1-201ENST00000348161 TDRD9Q8NDG6 1382 aaKnown RBP26.02■■□□□ 1.76
TOM1L1-201ENST00000348161 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.75
TOM1L1-201ENST00000348161 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
TOM1L1-201ENST00000348161 EIF4G3O43432 1585 aaKnown RBP25.9■■□□□ 1.74
TOM1L1-201ENST00000348161 WDR97A6NE52 1622 aa25.89■■□□□ 1.73
TOM1L1-201ENST00000348161 GAPVD1Q14C86 1478 aa25.87■■□□□ 1.73
TOM1L1-201ENST00000348161 CHIC1Q5VXU3 224 aa25.84■■□□□ 1.73
TOM1L1-201ENST00000348161 GRIN2BQ13224 1484 aa25.83■■□□□ 1.73
TOM1L1-201ENST00000348161 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
TOM1L1-201ENST00000348161 ABCA5Q8WWZ7 1642 aa25.76■■□□□ 1.72
TOM1L1-201ENST00000348161 FBLN2P98095 1184 aa25.75■■□□□ 1.71
TOM1L1-201ENST00000348161 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
TOM1L1-201ENST00000348161 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
TOM1L1-201ENST00000348161 MAGI1Q96QZ7 1491 aaPredicted RBP25.71■■□□□ 1.71
TOM1L1-201ENST00000348161 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
TOM1L1-201ENST00000348161 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
TOM1L1-201ENST00000348161 PBRM1Q86U86 1689 aa25.65■■□□□ 1.7
TOM1L1-201ENST00000348161 IGF1RP08069 1367 aa25.63■■□□□ 1.69
TOM1L1-201ENST00000348161 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
TOM1L1-201ENST00000348161 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
TOM1L1-201ENST00000348161 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
TOM1L1-201ENST00000348161 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
TOM1L1-201ENST00000348161 ADAMTS12P58397 1594 aa25.51■■□□□ 1.67
TOM1L1-201ENST00000348161 DNAJC5Q9H3Z4 198 aa25.49■■□□□ 1.67
TOM1L1-201ENST00000348161 EEA1Q15075 1411 aa25.49■■□□□ 1.67
TOM1L1-201ENST00000348161 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
TOM1L1-201ENST00000348161 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
TOM1L1-201ENST00000348161 CHD1O14646 1710 aa25.47■■□□□ 1.67
TOM1L1-201ENST00000348161 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
TOM1L1-201ENST00000348161 CUL7Q14999 1698 aa25.45■■□□□ 1.66
TOM1L1-201ENST00000348161 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
TOM1L1-201ENST00000348161 NUP160Q12769 1436 aa25.33■■□□□ 1.65
TOM1L1-201ENST00000348161 PRXQ9BXM0 1461 aa25.3■■□□□ 1.64
TOM1L1-201ENST00000348161 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
TOM1L1-201ENST00000348161 CLASP1Q7Z460 1538 aa25.24■■□□□ 1.63
TOM1L1-201ENST00000348161 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.63
TOM1L1-201ENST00000348161 JPH4Q96JJ6 628 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms