Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.29■■□□□ 1
TMEM56Q96MV1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM56Q96MV1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM56Q96MV1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM56Q96MV1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM56Q96MV1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM56Q96MV1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.27■■□□□ 1
TMEM56Q96MV1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM56Q96MV1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.27■■□□□ 1
TMEM56Q96MV1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM56Q96MV1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM56Q96MV1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM56Q96MV1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TMEM56Q96MV1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM56Q96MV1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM56Q96MV1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM56Q96MV1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.24■□□□□ 0.99
TMEM56Q96MV1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM56Q96MV1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM56Q96MV1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 BX255925.1-201ENST00000566954 1854 ntBASIC21.23■□□□□ 0.99
TMEM56Q96MV1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM56Q96MV1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM56Q96MV1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TMEM56Q96MV1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TMEM56Q96MV1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM56Q96MV1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM56Q96MV1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM56Q96MV1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TMEM56Q96MV1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM56Q96MV1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.19■□□□□ 0.98
TMEM56Q96MV1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM56Q96MV1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM56Q96MV1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TMEM56Q96MV1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEM56Q96MV1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.18■□□□□ 0.98
TMEM56Q96MV1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM56Q96MV1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TMEM56Q96MV1 AP004833.2-201ENST00000532228 1454 ntBASIC21.18■□□□□ 0.98
TMEM56Q96MV1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM56Q96MV1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM56Q96MV1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM56Q96MV1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TMEM56Q96MV1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.17■□□□□ 0.98
TMEM56Q96MV1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM56Q96MV1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM56Q96MV1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TMEM56Q96MV1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM56Q96MV1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM56Q96MV1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM56Q96MV1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM56Q96MV1 AL133380.1-201ENST00000506013 324 ntBASIC21.15■□□□□ 0.98
TMEM56Q96MV1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM56Q96MV1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM56Q96MV1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM56Q96MV1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM56Q96MV1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TMEM56Q96MV1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM56Q96MV1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM56Q96MV1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM56Q96MV1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM56Q96MV1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM56Q96MV1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM56Q96MV1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM56Q96MV1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM56Q96MV1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM56Q96MV1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.11■□□□□ 0.97
TMEM56Q96MV1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM56Q96MV1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM56Q96MV1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM56Q96MV1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM56Q96MV1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TMEM56Q96MV1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM56Q96MV1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM56Q96MV1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM56Q96MV1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM56Q96MV1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM56Q96MV1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM56Q96MV1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM56Q96MV1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TMEM56Q96MV1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM56Q96MV1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM56Q96MV1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TMEM56Q96MV1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM56Q96MV1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM56Q96MV1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM56Q96MV1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM56Q96MV1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM56Q96MV1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM56Q96MV1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
TMEM56Q96MV1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TMEM56Q96MV1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM56Q96MV1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM56Q96MV1 LINC01003-201ENST00000564834 1764 ntBASIC21.04■□□□□ 0.96
TMEM56Q96MV1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms