Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM235A6NFC5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM235A6NFC5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM235A6NFC5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TMEM235A6NFC5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM235A6NFC5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM235A6NFC5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.02■■□□□ 1.12
TMEM235A6NFC5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.02■■□□□ 1.12
TMEM235A6NFC5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.02■■□□□ 1.12
TMEM235A6NFC5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TMEM235A6NFC5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM235A6NFC5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TMEM235A6NFC5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM235A6NFC5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM235A6NFC5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TMEM235A6NFC5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22■■□□□ 1.11
TMEM235A6NFC5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TMEM235A6NFC5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM235A6NFC5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.99■■□□□ 1.11
TMEM235A6NFC5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TMEM235A6NFC5 AL133380.1-201ENST00000506013 324 ntBASIC21.99■■□□□ 1.11
TMEM235A6NFC5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM235A6NFC5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM235A6NFC5 BX255925.1-201ENST00000566954 1854 ntBASIC21.98■■□□□ 1.11
TMEM235A6NFC5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TMEM235A6NFC5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM235A6NFC5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM235A6NFC5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.97■■□□□ 1.11
TMEM235A6NFC5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TMEM235A6NFC5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.97■■□□□ 1.11
TMEM235A6NFC5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM235A6NFC5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.96■■□□□ 1.11
TMEM235A6NFC5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM235A6NFC5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM235A6NFC5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM235A6NFC5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.94■■□□□ 1.1
TMEM235A6NFC5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.94■■□□□ 1.1
TMEM235A6NFC5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TMEM235A6NFC5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM235A6NFC5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TMEM235A6NFC5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.93■■□□□ 1.1
TMEM235A6NFC5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TMEM235A6NFC5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.92■■□□□ 1.1
TMEM235A6NFC5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM235A6NFC5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM235A6NFC5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TMEM235A6NFC5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.91■■□□□ 1.1
TMEM235A6NFC5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TMEM235A6NFC5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.91■■□□□ 1.1
TMEM235A6NFC5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TMEM235A6NFC5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TMEM235A6NFC5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TMEM235A6NFC5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.9■■□□□ 1.1
TMEM235A6NFC5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.9■■□□□ 1.1
TMEM235A6NFC5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TMEM235A6NFC5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.9■■□□□ 1.1
TMEM235A6NFC5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TMEM235A6NFC5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TMEM235A6NFC5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TMEM235A6NFC5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM235A6NFC5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM235A6NFC5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM235A6NFC5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM235A6NFC5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.87■■□□□ 1.09
TMEM235A6NFC5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TMEM235A6NFC5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.87■■□□□ 1.09
TMEM235A6NFC5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.86■■□□□ 1.09
TMEM235A6NFC5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.86■■□□□ 1.09
TMEM235A6NFC5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM235A6NFC5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM235A6NFC5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.86■■□□□ 1.09
TMEM235A6NFC5 AP004833.2-201ENST00000532228 1454 ntBASIC21.85■■□□□ 1.09
TMEM235A6NFC5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM235A6NFC5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM235A6NFC5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM235A6NFC5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM235A6NFC5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.83■■□□□ 1.09
TMEM235A6NFC5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM235A6NFC5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.83■■□□□ 1.09
TMEM235A6NFC5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM235A6NFC5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM235A6NFC5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms