Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV5A0A0B4J249 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV5A0A0B4J249 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV5A0A0B4J249 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV5A0A0B4J249 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV5A0A0B4J249 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV5A0A0B4J249 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV5A0A0B4J249 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV5A0A0B4J249 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV5A0A0B4J249 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAV5A0A0B4J249 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV5A0A0B4J249 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV5A0A0B4J249 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV5A0A0B4J249 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV5A0A0B4J249 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV5A0A0B4J249 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV5A0A0B4J249 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRAV5A0A0B4J249 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV5A0A0B4J249 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV5A0A0B4J249 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV5A0A0B4J249 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV5A0A0B4J249 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV5A0A0B4J249 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV5A0A0B4J249 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV5A0A0B4J249 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRAV5A0A0B4J249 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAV5A0A0B4J249 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV5A0A0B4J249 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRAV5A0A0B4J249 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20■□□□□ 0.79
TRAV5A0A0B4J249 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV5A0A0B4J249 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV5A0A0B4J249 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRAV5A0A0B4J249 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV5A0A0B4J249 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV5A0A0B4J249 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV5A0A0B4J249 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV5A0A0B4J249 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV5A0A0B4J249 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV5A0A0B4J249 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV5A0A0B4J249 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV5A0A0B4J249 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV5A0A0B4J249 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV5A0A0B4J249 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV5A0A0B4J249 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRAV5A0A0B4J249 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 BX255925.1-201ENST00000566954 1854 ntBASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV5A0A0B4J249 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV5A0A0B4J249 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAV5A0A0B4J249 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV5A0A0B4J249 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV5A0A0B4J249 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV5A0A0B4J249 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV5A0A0B4J249 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV5A0A0B4J249 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV5A0A0B4J249 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV5A0A0B4J249 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV5A0A0B4J249 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV5A0A0B4J249 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV5A0A0B4J249 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV5A0A0B4J249 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV5A0A0B4J249 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.89■□□□□ 0.77
TRAV5A0A0B4J249 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV5A0A0B4J249 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV5A0A0B4J249 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV5A0A0B4J249 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV5A0A0B4J249 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV5A0A0B4J249 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms