Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.381e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.364e-6■■■■□ 20.4
CSTF2TQ9H0L4 GRIN2C-204ENST00000584176 6516 ntTSL 216.53■□□□□ 0.244e-8■■■■□ 20.4
CSTF2TQ9H0L4 ARHGEF10L-209ENST00000495593 2261 ntTSL 214.62□□□□□ -0.074e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-210ENST00000413133 587 ntTSL 414.25□□□□□ -0.134e-6■■■■□ 20.4
CSTF2TQ9H0L4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.224e-8■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.6□□□□□ -0.234e-6■■■■□ 20.4
CSTF2TQ9H0L4 KDM4B-212ENST00000624683 5076 nt13.58□□□□□ -0.231e-6■■■■□ 20.4
CSTF2TQ9H0L4 MAD1L1-223ENST00000496548 639 ntTSL 513.54□□□□□ -0.244e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.44□□□□□ -0.264e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.44□□□□□ -0.264e-6■■■■□ 20.4
CSTF2TQ9H0L4 SNORD3B-1-201ENST00000577988 758 ntBASIC12.9□□□□□ -0.344e-6■■■■□ 20.4
CSTF2TQ9H0L4 FOSL1-205ENST00000534222 584 ntTSL 312.72□□□□□ -0.371e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-226ENST00000525001 1155 ntTSL 512.56□□□□□ -0.44e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.21□□□□□ -0.464e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.524e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.64e-6■■■■□ 20.4
CSTF2TQ9H0L4 SNORD3B-1-203ENST00000631292 217 nt10.18□□□□□ -0.784e-6■■■■□ 20.4
CSTF2TQ9H0L4 SNORD3B-1-202ENST00000617128 218 nt10.13□□□□□ -0.794e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.864e-6■■■■□ 20.4
CSTF2TQ9H0L4 AK3-204ENST00000611749 4029 ntTSL 4 BASIC9.39□□□□□ -0.914e-6■■■■□ 20.4
CSTF2TQ9H0L4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC9.22□□□□□ -0.934e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-229ENST00000526742 657 ntTSL 49.05□□□□□ -0.964e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-233ENST00000529552 688 ntTSL 48.72□□□□□ -1.014e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8.18□□□□□ -1.14e-6■■■■□ 20.4
CSTF2TQ9H0L4 FGFR1-240ENST00000533668 571 ntTSL 57.77□□□□□ -1.174e-6■■■■□ 20.4
CSTF2TQ9H0L4 VEZF1-201ENST00000258963 3948 ntTSL 1 (best)5.85□□□□□ -1.474e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.81□□□□□ -1.484e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH1-203ENST00000483110 3905 ntTSL 1 (best)5.81□□□□□ -1.484e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.281e-8■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-207ENST00000494320 977 ntTSL 522.99■■□□□ 1.274e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.194e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-207ENST00000482212 706 ntTSL 221.94■■□□□ 1.14e-6■■■■□ 20.4
CSTF2TQ9H0L4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.974e-6■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-203ENST00000469316 608 ntTSL 420.38■□□□□ 0.854e-6■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-207ENST00000549633 1076 ntTSL 1 (best)19.98■□□□□ 0.794e-6■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-201ENST00000229866 2124 ntTSL 219.79■□□□□ 0.764e-6■■■■□ 20.4
CSTF2TQ9H0L4 EHMT1-246ENST00000637748 2006 ntTSL 519.34■□□□□ 0.694e-6■■■■□ 20.4
CSTF2TQ9H0L4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.682e-6■■■■□ 20.4
CSTF2TQ9H0L4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.624e-6■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-208ENST00000550173 891 ntTSL 518.83■□□□□ 0.64e-6■■■■□ 20.4
CSTF2TQ9H0L4 DENND5A-211ENST00000530780 611 ntTSL 318.61■□□□□ 0.574e-6■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.56■□□□□ 0.564e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH2-214ENST00000416410 887 ntTSL 218.45■□□□□ 0.541e-8■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-205ENST00000479516 1525 ntTSL 1 (best)18.35■□□□□ 0.534e-6■■■■□ 20.4
CSTF2TQ9H0L4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.524e-6■■■■□ 20.4
CSTF2TQ9H0L4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.07■□□□□ 0.484e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH2-217ENST00000469963 1682 ntTSL 517.71■□□□□ 0.421e-8■■■■□ 20.4
CSTF2TQ9H0L4 ATG2A-204ENST00000461701 2031 ntTSL 217.62■□□□□ 0.414e-6■■■■□ 20.4
CSTF2TQ9H0L4 DDAH2-215ENST00000436437 882 ntTSL 317.54■□□□□ 0.41e-8■■■■□ 20.4
CSTF2TQ9H0L4 DENND5A-205ENST00000526707 2861 ntTSL 217.32■□□□□ 0.364e-6■■■■□ 20.4
CSTF2TQ9H0L4 EHMT1-217ENST00000494249 2038 ntTSL 1 (best)17.28■□□□□ 0.364e-6■■■■□ 20.4
CSTF2TQ9H0L4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.322e-6■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-209ENST00000551506 586 ntTSL 316.87■□□□□ 0.294e-6■■■■□ 20.4
CSTF2TQ9H0L4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.274e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-215ENST00000531123 1688 ntTSL 516.75■□□□□ 0.274e-6■■■■□ 20.4
CSTF2TQ9H0L4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.264e-6■■■■□ 20.4
CSTF2TQ9H0L4 COL11A2-205ENST00000457788 2099 ntTSL 515.98■□□□□ 0.154e-6■■■■□ 20.4
CSTF2TQ9H0L4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.84■□□□□ 0.134e-6■■■■□ 20.4
CSTF2TQ9H0L4 EHMT1-208ENST00000475564 2782 ntTSL 1 (best)15.65■□□□□ 0.14e-6■■■■□ 20.4
CSTF2TQ9H0L4 CSGALNACT1-216ENST00000524213 554 ntTSL 215.42■□□□□ 0.064e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-204ENST00000474103 417 ntTSL 515.28■□□□□ 0.044e-6■■■■□ 20.4
CSTF2TQ9H0L4 CSGALNACT1-213ENST00000523262 792 ntTSL 215.15■□□□□ 0.024e-6■■■■□ 20.4
CSTF2TQ9H0L4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.014e-6■■■■□ 20.4
CSTF2TQ9H0L4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.02■□□□□ -02e-6■■■■□ 20.4
CSTF2TQ9H0L4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.044e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-212ENST00000529027 429 ntTSL 314.75□□□□□ -0.054e-6■■■■□ 20.4
CSTF2TQ9H0L4 KCNAB2-211ENST00000445501 486 ntTSL 414.67□□□□□ -0.064e-6■■■■□ 20.4
CSTF2TQ9H0L4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.064e-6■■■■□ 20.4
CSTF2TQ9H0L4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.074e-6■■■■□ 20.4
CSTF2TQ9H0L4 HMGA1-206ENST00000478214 716 ntTSL 1 (best)14.56□□□□□ -0.084e-6■■■■□ 20.4
CSTF2TQ9H0L4 CSGALNACT1-204ENST00000517494 766 ntTSL 314.55□□□□□ -0.084e-6■■■■□ 20.4
CSTF2TQ9H0L4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.52□□□□□ -0.099e-7■■■■□ 20.4
CSTF2TQ9H0L4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.094e-6■■■■□ 20.4
CSTF2TQ9H0L4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.114e-6■■■■□ 20.4
CSTF2TQ9H0L4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.124e-6■■■■□ 20.4
CSTF2TQ9H0L4 KCNAB2-216ENST00000478098 413 ntTSL 213.95□□□□□ -0.184e-6■■■■□ 20.4
CSTF2TQ9H0L4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.192e-6■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.24e-6■■■■□ 20.4
CSTF2TQ9H0L4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.61□□□□□ -0.234e-6■■■■□ 20.4
CSTF2TQ9H0L4 BCR-207ENST00000463770 168 ntTSL 1 (best)13.59□□□□□ -0.235e-7■■■■□ 20.4
CSTF2TQ9H0L4 UBASH3B-202ENST00000525711 572 ntTSL 413.59□□□□□ -0.234e-6■■■■□ 20.4
CSTF2TQ9H0L4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.45□□□□□ -0.269e-7■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.294e-6■■■■□ 20.4
CSTF2TQ9H0L4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.34e-6■■■■□ 20.4
CSTF2TQ9H0L4 BCR-212ENST00000479188 658 ntTSL 412.92□□□□□ -0.344e-7■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-205ENST00000464113 964 ntTSL 312.92□□□□□ -0.344e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.354e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.44e-6■■■■□ 20.4
CSTF2TQ9H0L4 ACSF3-215ENST00000544543 883 ntTSL 512.35□□□□□ -0.432e-7■■■■□ 20.4
CSTF2TQ9H0L4 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.494e-6■■■■□ 20.4
CSTF2TQ9H0L4 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.514e-6■■■■□ 20.4
CSTF2TQ9H0L4 ACSF3-216ENST00000562204 581 ntTSL 311.79□□□□□ -0.522e-7■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.534e-6■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.554e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.574e-6■■■■□ 20.4
CSTF2TQ9H0L4 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.584e-6■■■■□ 20.4
CSTF2TQ9H0L4 KDM2B-210ENST00000539394 892 ntTSL 511.29□□□□□ -0.64e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-210ENST00000490843 1527 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.654e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-204ENST00000463227 954 ntTSL 210.58□□□□□ -0.724e-6■■■■□ 20.4
Retrieved 100 of 19,151 protein–RNA pairs in 213.4 ms