RNA–Protein interactions for RNA: ENST00000479516.1

RNF8-205, Transcript of ring finger protein 8, humanhuman

TSL 1 (best)

Gene RNF8, Length 1,525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-205ENST00000479516 NISCHQ9Y2I1 1504 aa48.21■■■■■ 5.31
RNF8-205ENST00000479516 CCDC180Q9P1Z9 1646 aa42.8■■■■■ 4.44
RNF8-205ENST00000479516 ABCC9O60706 1549 aa41.98■■■■■ 4.31
RNF8-205ENST00000479516 DCAF8L2P0C7V8 631 aa40.27■■■■■ 4.04
RNF8-205ENST00000479516 RB1CC1Q8TDY2 1594 aa40.26■■■■■ 4.04
RNF8-205ENST00000479516 NACADO15069 1562 aa40.2■■■■■ 4.03
RNF8-205ENST00000479516 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
RNF8-205ENST00000479516 MYO15BQ96JP2 1530 aa39.93■■■■□ 3.98
RNF8-205ENST00000479516 DCAF1Q9Y4B6 1507 aa39.79■■■■□ 3.96
RNF8-205ENST00000479516 UNC13AQ9UPW8 1703 aa39.57■■■■□ 3.93
RNF8-205ENST00000479516 PABPN1Q86U42 306 aaKnown RBP eCLIP39.25■■■■□ 3.87
RNF8-205ENST00000479516 BICRAQ9NZM4 1560 aa39.21■■■■□ 3.87
RNF8-205ENST00000479516 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
RNF8-205ENST00000479516 DNAJC5BQ9UF47 199 aa38.64■■■■□ 3.78
RNF8-205ENST00000479516 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
RNF8-205ENST00000479516 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
RNF8-205ENST00000479516 CC2D2AQ9P2K1 1620 aa37.97■■■■□ 3.67
RNF8-205ENST00000479516 CECR2Q9BXF3 1484 aa37.67■■■■□ 3.62
RNF8-205ENST00000479516 SMARCA4P51532 1647 aa37.42■■■■□ 3.58
RNF8-205ENST00000479516 BAZ1AQ9NRL2 1556 aaPredicted RBP37.3■■■■□ 3.56
RNF8-205ENST00000479516 MROH2BQ7Z745 1585 aa37.24■■■■□ 3.55
RNF8-205ENST00000479516 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.55
RNF8-205ENST00000479516 NCAPD3P42695 1498 aa37.13■■■■□ 3.53
RNF8-205ENST00000479516 SMARCA2P51531 1590 aa37.07■■■■□ 3.52
RNF8-205ENST00000479516 PEG3Q9GZU2 1588 aa37.02■■■■□ 3.52
RNF8-205ENST00000479516 HMGXB3Q12766 1538 aa36.94■■■■□ 3.5
RNF8-205ENST00000479516 WIZO95785 1651 aa36.87■■■■□ 3.49
RNF8-205ENST00000479516 BAZ1BQ9UIG0 1483 aaKnown RBP36.85■■■■□ 3.49
RNF8-205ENST00000479516 RSF1Q96T23 1441 aaPredicted RBP36.77■■■■□ 3.48
RNF8-205ENST00000479516 NESP48681 1621 aa36.4■■■■□ 3.42
RNF8-205ENST00000479516 TOP2AP11388 1531 aaKnown RBP36.35■■■■□ 3.41
RNF8-205ENST00000479516 LAMC3Q9Y6N6 1575 aa36.14■■■■□ 3.38
RNF8-205ENST00000479516 ERCC6Q03468 1493 aa36.06■■■■□ 3.36
RNF8-205ENST00000479516 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
RNF8-205ENST00000479516 CCDC88BA6NC98 1476 aa35.98■■■■□ 3.35
RNF8-205ENST00000479516 KIF21AQ7Z4S6 1674 aa35.95■■■■□ 3.35
RNF8-205ENST00000479516 CFTRP13569 1480 aa35.86■■■■□ 3.33
RNF8-205ENST00000479516 SUPT5HO00267 1087 aaKnown RBP35.85■■■■□ 3.33
RNF8-205ENST00000479516 PDS5BQ9NTI5 1447 aa35.84■■■■□ 3.33
RNF8-205ENST00000479516 THOC2Q8NI27 1593 aaKnown RBP35.78■■■■□ 3.32
RNF8-205ENST00000479516 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
RNF8-205ENST00000479516 CUX2O14529 1486 aa35.64■■■■□ 3.3
RNF8-205ENST00000479516 PRDM2Q13029 1718 aa35.63■■■■□ 3.29
RNF8-205ENST00000479516 CEP164Q9UPV0 1460 aa35.58■■■■□ 3.29
RNF8-205ENST00000479516 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
RNF8-205ENST00000479516 WDR62O43379 1518 aa35.45■■■■□ 3.27
RNF8-205ENST00000479516 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
RNF8-205ENST00000479516 TOPBP1Q92547 1522 aa35.13■■■■□ 3.21
RNF8-205ENST00000479516 DNMBPQ6XZF7 1577 aa35.05■■■■□ 3.2
RNF8-205ENST00000479516 ABCC8Q09428 1581 aa34.95■■■■□ 3.19
RNF8-205ENST00000479516 CUX1P39880 1505 aa34.92■■■■□ 3.18
RNF8-205ENST00000479516 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
RNF8-205ENST00000479516 ZNF608Q9ULD9 1512 aaPredicted RBP34.82■■■■□ 3.16
RNF8-205ENST00000479516 IFT140Q96RY7 1462 aa34.81■■■■□ 3.16
RNF8-205ENST00000479516 TARBP1Q13395 1621 aaKnown RBP34.78■■■■□ 3.16
RNF8-205ENST00000479516 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
RNF8-205ENST00000479516 RAD54L2Q9Y4B4 1467 aa34.74■■■■□ 3.15
RNF8-205ENST00000479516 SOGA1O94964 1423 aa34.64■■■■□ 3.14
RNF8-205ENST00000479516 SYNJ1O43426 1573 aa34.64■■■■□ 3.14
RNF8-205ENST00000479516 EIF4G3O43432 1585 aaKnown RBP34.63■■■■□ 3.13
RNF8-205ENST00000479516 DNAJC5Q9H3Z4 198 aa34.61■■■■□ 3.13
RNF8-205ENST00000479516 WRNQ14191 1432 aaPredicted RBP eCLIP34.61■■■■□ 3.13
RNF8-205ENST00000479516 AQRO60306 1485 aaKnown RBP eCLIP34.59■■■■□ 3.13
RNF8-205ENST00000479516 BIVM-ERCC5R4GMW8 1640 aa34.57■■■■□ 3.12
RNF8-205ENST00000479516 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
RNF8-205ENST00000479516 TDRD9Q8NDG6 1382 aaKnown RBP34.51■■■■□ 3.12
RNF8-205ENST00000479516 WDR97A6NE52 1622 aa34.51■■■■□ 3.12
RNF8-205ENST00000479516 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
RNF8-205ENST00000479516 ABCA5Q8WWZ7 1642 aa34.29■■■■□ 3.08
RNF8-205ENST00000479516 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
RNF8-205ENST00000479516 GAPVD1Q14C86 1478 aa34.24■■■■□ 3.07
RNF8-205ENST00000479516 CHD1O14646 1710 aa34.24■■■■□ 3.07
RNF8-205ENST00000479516 SNAPC4Q5SXM2 1469 aa34.23■■■■□ 3.07
RNF8-205ENST00000479516 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
RNF8-205ENST00000479516 OSCARQ8IYS5 282 aa34.19■■■■□ 3.06
RNF8-205ENST00000479516 MAGI1Q96QZ7 1491 aaPredicted RBP34.1■■■■□ 3.05
RNF8-205ENST00000479516 FBLN2P98095 1184 aa34.09■■■■□ 3.05
RNF8-205ENST00000479516 SYNJ2O15056 1496 aa33.99■■■■□ 3.03
RNF8-205ENST00000479516 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
RNF8-205ENST00000479516 ADAMTS12P58397 1594 aa33.95■■■■□ 3.03
RNF8-205ENST00000479516 ERICH3Q5RHP9 1530 aa33.93■■■■□ 3.02
RNF8-205ENST00000479516 KIF27Q86VH2 1401 aa33.82■■■■□ 3
RNF8-205ENST00000479516 FHAD1B1AJZ9 1412 aa33.81■■■■□ 3
RNF8-205ENST00000479516 CLASP1Q7Z460 1538 aa33.81■■■■□ 3
RNF8-205ENST00000479516 GRIN2AQ12879 1464 aa33.81■■■■□ 3
RNF8-205ENST00000479516 IGF1RP08069 1367 aa33.78■■■■□ 3
RNF8-205ENST00000479516 RIMBP3CA6NJZ7 1639 aa33.77■■■■□ 3
RNF8-205ENST00000479516 RIMBP3BA6NNM3 1639 aa33.77■■■■□ 3
RNF8-205ENST00000479516 RIMBP3Q9UFD9 1639 aa33.77■■■■□ 3
RNF8-205ENST00000479516 RUSC2Q8N2Y8 1516 aa33.76■■■■□ 3
RNF8-205ENST00000479516 TRIM41Q8WV44 630 aa33.76■■■■□ 3
RNF8-205ENST00000479516 ARHGEF11O15085 1522 aa33.73■■■□□ 2.99
RNF8-205ENST00000479516 CEP170Q5SW79 1584 aa33.72■■■□□ 2.99
RNF8-205ENST00000479516 NUP160Q12769 1436 aa33.66■■■□□ 2.98
RNF8-205ENST00000479516 CUL7Q14999 1698 aa33.62■■■□□ 2.97
RNF8-205ENST00000479516 CARMIL1Q5VZK9 1371 aa33.54■■■□□ 2.96
RNF8-205ENST00000479516 ARAP1Q96P48 1450 aa33.49■■■□□ 2.95
RNF8-205ENST00000479516 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
RNF8-205ENST00000479516 ERCC6L2Q5T890 1561 aa33.48■■■□□ 2.95
RNF8-205ENST00000479516 SHROOM2Q13796 1616 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms