RNA–Protein interactions for RNA: ENST00000533668.5

FGFR1-240, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5

Gene FGFR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-240ENST00000533668 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
FGFR1-240ENST00000533668 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
FGFR1-240ENST00000533668 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
FGFR1-240ENST00000533668 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
FGFR1-240ENST00000533668 NISCHQ9Y2I1 1504 aa20.44■□□□□ 0.86
FGFR1-240ENST00000533668 FOXD1Q16676 465 aa20.43■□□□□ 0.86
FGFR1-240ENST00000533668 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
FGFR1-240ENST00000533668 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
FGFR1-240ENST00000533668 ADRA2BP18089 450 aa19.38■□□□□ 0.69
FGFR1-240ENST00000533668 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
FGFR1-240ENST00000533668 MSH5O43196 834 aa18.95■□□□□ 0.62
FGFR1-240ENST00000533668 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
FGFR1-240ENST00000533668 ABCC9O60706 1549 aa18.46■□□□□ 0.55
FGFR1-240ENST00000533668 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
FGFR1-240ENST00000533668 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
FGFR1-240ENST00000533668 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
FGFR1-240ENST00000533668 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
FGFR1-240ENST00000533668 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
FGFR1-240ENST00000533668 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
FGFR1-240ENST00000533668 NACADO15069 1562 aa17.4■□□□□ 0.38
FGFR1-240ENST00000533668 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.37
FGFR1-240ENST00000533668 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
FGFR1-240ENST00000533668 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
FGFR1-240ENST00000533668 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
FGFR1-240ENST00000533668 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
FGFR1-240ENST00000533668 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
FGFR1-240ENST00000533668 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
FGFR1-240ENST00000533668 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
FGFR1-240ENST00000533668 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
FGFR1-240ENST00000533668 ZCCHC6Q5VYS8 1495 aaKnown RBP16.94■□□□□ 0.3
FGFR1-240ENST00000533668 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
FGFR1-240ENST00000533668 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
FGFR1-240ENST00000533668 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
FGFR1-240ENST00000533668 KCNA4P22459 653 aa16.83■□□□□ 0.28
FGFR1-240ENST00000533668 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
FGFR1-240ENST00000533668 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
FGFR1-240ENST00000533668 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
FGFR1-240ENST00000533668 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
FGFR1-240ENST00000533668 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
FGFR1-240ENST00000533668 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
FGFR1-240ENST00000533668 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
FGFR1-240ENST00000533668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.183e-7■□□□□ 10.3
FGFR1-240ENST00000533668 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
FGFR1-240ENST00000533668 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
FGFR1-240ENST00000533668 C1QBPQ07021 282 aaKnown RBP15.99■□□□□ 0.15
FGFR1-240ENST00000533668 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
FGFR1-240ENST00000533668 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
FGFR1-240ENST00000533668 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
FGFR1-240ENST00000533668 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
FGFR1-240ENST00000533668 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
FGFR1-240ENST00000533668 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
FGFR1-240ENST00000533668 HMGXB3Q12766 1538 aa15.95■□□□□ 0.14
FGFR1-240ENST00000533668 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
FGFR1-240ENST00000533668 CUX2O14529 1486 aa15.91■□□□□ 0.14
FGFR1-240ENST00000533668 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
FGFR1-240ENST00000533668 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
FGFR1-240ENST00000533668 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
FGFR1-240ENST00000533668 NESP48681 1621 aa15.84■□□□□ 0.13
FGFR1-240ENST00000533668 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
FGFR1-240ENST00000533668 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
FGFR1-240ENST00000533668 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
FGFR1-240ENST00000533668 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
FGFR1-240ENST00000533668 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
FGFR1-240ENST00000533668 WIZO95785 1651 aa15.67■□□□□ 0.1
FGFR1-240ENST00000533668 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
FGFR1-240ENST00000533668 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
FGFR1-240ENST00000533668 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
FGFR1-240ENST00000533668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
FGFR1-240ENST00000533668 CAPN15O75808 1086 aa15.53■□□□□ 0.08
FGFR1-240ENST00000533668 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
FGFR1-240ENST00000533668 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
FGFR1-240ENST00000533668 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
FGFR1-240ENST00000533668 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
FGFR1-240ENST00000533668 ZBTB22O15209 634 aa15.48■□□□□ 0.07
FGFR1-240ENST00000533668 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
FGFR1-240ENST00000533668 WDR62O43379 1518 aa15.47■□□□□ 0.07
FGFR1-240ENST00000533668 APLP2Q06481 763 aa15.45■□□□□ 0.06
FGFR1-240ENST00000533668 PRDM2Q13029 1718 aa15.45■□□□□ 0.06
FGFR1-240ENST00000533668 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
FGFR1-240ENST00000533668 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
FGFR1-240ENST00000533668 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
FGFR1-240ENST00000533668 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
FGFR1-240ENST00000533668 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
FGFR1-240ENST00000533668 CFTRP13569 1480 aa15.33■□□□□ 0.04
FGFR1-240ENST00000533668 DSG3P32926 999 aa15.32■□□□□ 0.04
FGFR1-240ENST00000533668 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
FGFR1-240ENST00000533668 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
FGFR1-240ENST00000533668 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
FGFR1-240ENST00000533668 ABCB7O75027 752 aa15.22■□□□□ 0.03
FGFR1-240ENST00000533668 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
FGFR1-240ENST00000533668 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
FGFR1-240ENST00000533668 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
FGFR1-240ENST00000533668 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
FGFR1-240ENST00000533668 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
FGFR1-240ENST00000533668 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
FGFR1-240ENST00000533668 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
FGFR1-240ENST00000533668 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
FGFR1-240ENST00000533668 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
FGFR1-240ENST00000533668 CHD1O14646 1710 aa15.08■□□□□ 0
FGFR1-240ENST00000533668 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms