RNA–Protein interactions for RNA: ENST00000457788.5

COL11A2-205, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 5

Gene COL11A2, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-205ENST00000457788 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
COL11A2-205ENST00000457788 CCDC180Q9P1Z9 1646 aa32.9■■■□□ 2.86
COL11A2-205ENST00000457788 ZCCHC6Q5VYS8 1495 aaKnown RBP31.54■■■□□ 2.64
COL11A2-205ENST00000457788 ABCC9O60706 1549 aa31.33■■■□□ 2.61
COL11A2-205ENST00000457788 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
COL11A2-205ENST00000457788 DCAF1Q9Y4B6 1507 aa31.06■■■□□ 2.56
COL11A2-205ENST00000457788 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
COL11A2-205ENST00000457788 NACADO15069 1562 aa30.68■■■□□ 2.5
COL11A2-205ENST00000457788 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
COL11A2-205ENST00000457788 RB1CC1Q8TDY2 1594 aa30.48■■■□□ 2.47
COL11A2-205ENST00000457788 SCRIBQ14160 1630 aa30.26■■■□□ 2.43
COL11A2-205ENST00000457788 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
COL11A2-205ENST00000457788 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
COL11A2-205ENST00000457788 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
COL11A2-205ENST00000457788 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
COL11A2-205ENST00000457788 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
COL11A2-205ENST00000457788 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
COL11A2-205ENST00000457788 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
COL11A2-205ENST00000457788 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
COL11A2-205ENST00000457788 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
COL11A2-205ENST00000457788 WIZO95785 1651 aa28.84■■■□□ 2.21
COL11A2-205ENST00000457788 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.19
COL11A2-205ENST00000457788 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
COL11A2-205ENST00000457788 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
COL11A2-205ENST00000457788 SMARCA2P51531 1590 aa28.51■■■□□ 2.15
COL11A2-205ENST00000457788 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
COL11A2-205ENST00000457788 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
COL11A2-205ENST00000457788 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
COL11A2-205ENST00000457788 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
COL11A2-205ENST00000457788 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
COL11A2-205ENST00000457788 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.11
COL11A2-205ENST00000457788 CHIC1Q5VXU3 224 aa27.91■■■□□ 2.06
COL11A2-205ENST00000457788 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
COL11A2-205ENST00000457788 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.02
COL11A2-205ENST00000457788 CFTRP13569 1480 aa27.62■■■□□ 2.01
COL11A2-205ENST00000457788 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
COL11A2-205ENST00000457788 CADPSQ9ULU8 1353 aa27.57■■■□□ 2
COL11A2-205ENST00000457788 TRIM41Q8WV44 630 aa27.56■■■□□ 2
COL11A2-205ENST00000457788 PRDM2Q13029 1718 aa27.52■■■□□ 2
COL11A2-205ENST00000457788 NESP48681 1621 aa27.44■■□□□ 1.98
COL11A2-205ENST00000457788 HRCP23327 699 aa27.42■■□□□ 1.98
COL11A2-205ENST00000457788 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
COL11A2-205ENST00000457788 WRNQ14191 1432 aaPredicted RBP eCLIP27.4■■□□□ 1.98
COL11A2-205ENST00000457788 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
COL11A2-205ENST00000457788 FANCD2Q9BXW9 1451 aa27.29■■□□□ 1.96
COL11A2-205ENST00000457788 TOP2BQ02880 1626 aa27.21■■□□□ 1.95
COL11A2-205ENST00000457788 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
COL11A2-205ENST00000457788 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
COL11A2-205ENST00000457788 CUX1P39880 1505 aa27.18■■□□□ 1.94
COL11A2-205ENST00000457788 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
COL11A2-205ENST00000457788 KIF21AQ7Z4S6 1674 aa27.12■■□□□ 1.93
COL11A2-205ENST00000457788 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
COL11A2-205ENST00000457788 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
COL11A2-205ENST00000457788 SOGA1O94964 1423 aa27■■□□□ 1.91
COL11A2-205ENST00000457788 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
COL11A2-205ENST00000457788 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
COL11A2-205ENST00000457788 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
COL11A2-205ENST00000457788 MYT1Q01538 1121 aa26.93■■□□□ 1.9
COL11A2-205ENST00000457788 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
COL11A2-205ENST00000457788 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
COL11A2-205ENST00000457788 EEA1Q15075 1411 aa26.87■■□□□ 1.89
COL11A2-205ENST00000457788 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
COL11A2-205ENST00000457788 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
COL11A2-205ENST00000457788 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
COL11A2-205ENST00000457788 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
COL11A2-205ENST00000457788 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
COL11A2-205ENST00000457788 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
COL11A2-205ENST00000457788 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
COL11A2-205ENST00000457788 WDR62O43379 1518 aa26.72■■□□□ 1.87
COL11A2-205ENST00000457788 CUX2O14529 1486 aa26.71■■□□□ 1.87
COL11A2-205ENST00000457788 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
COL11A2-205ENST00000457788 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
COL11A2-205ENST00000457788 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
COL11A2-205ENST00000457788 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
COL11A2-205ENST00000457788 KIF21BO75037 1637 aa26.55■■□□□ 1.84
COL11A2-205ENST00000457788 GOLGA3Q08378 1498 aa26.51■■□□□ 1.84
COL11A2-205ENST00000457788 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
COL11A2-205ENST00000457788 IGF1RP08069 1367 aa26.49■■□□□ 1.83
COL11A2-205ENST00000457788 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
COL11A2-205ENST00000457788 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
COL11A2-205ENST00000457788 PRXQ9BXM0 1461 aa26.47■■□□□ 1.83
COL11A2-205ENST00000457788 RAPGEF2Q9Y4G8 1499 aa26.46■■□□□ 1.83
COL11A2-205ENST00000457788 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
COL11A2-205ENST00000457788 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
COL11A2-205ENST00000457788 ERICH3Q5RHP9 1530 aa26.41■■□□□ 1.82
COL11A2-205ENST00000457788 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.81
COL11A2-205ENST00000457788 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
COL11A2-205ENST00000457788 TNIKQ9UKE5 1360 aa26.37■■□□□ 1.81
COL11A2-205ENST00000457788 CARMIL1Q5VZK9 1371 aa26.36■■□□□ 1.81
COL11A2-205ENST00000457788 CUL7Q14999 1698 aa26.33■■□□□ 1.81
COL11A2-205ENST00000457788 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
COL11A2-205ENST00000457788 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
COL11A2-205ENST00000457788 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
COL11A2-205ENST00000457788 PPARGC1BQ86YN6 1023 aaKnown RBP26.25■■□□□ 1.79
COL11A2-205ENST00000457788 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
COL11A2-205ENST00000457788 CEP162Q5TB80 1403 aa26.24■■□□□ 1.79
COL11A2-205ENST00000457788 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
COL11A2-205ENST00000457788 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
COL11A2-205ENST00000457788 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
COL11A2-205ENST00000457788 RANGAP1P46060 587 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms