RNA–Protein interactions for RNA: ENST00000413133.6

FGFR1-210, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-210ENST00000413133 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
FGFR1-210ENST00000413133 ABCC9O60706 1549 aa33.99■■■■□ 3.03
FGFR1-210ENST00000413133 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
FGFR1-210ENST00000413133 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
FGFR1-210ENST00000413133 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
FGFR1-210ENST00000413133 NACADO15069 1562 aa31.97■■■□□ 2.71
FGFR1-210ENST00000413133 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
FGFR1-210ENST00000413133 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
FGFR1-210ENST00000413133 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
FGFR1-210ENST00000413133 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.62
FGFR1-210ENST00000413133 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
FGFR1-210ENST00000413133 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
FGFR1-210ENST00000413133 DCAF1Q9Y4B6 1507 aa30.82■■■□□ 2.52
FGFR1-210ENST00000413133 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
FGFR1-210ENST00000413133 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.52
FGFR1-210ENST00000413133 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
FGFR1-210ENST00000413133 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
FGFR1-210ENST00000413133 SCRIBQ14160 1630 aa30.53■■■□□ 2.48
FGFR1-210ENST00000413133 DNAJC5Q9H3Z4 198 aa30.12■■■□□ 2.41
FGFR1-210ENST00000413133 CUX2O14529 1486 aa29.68■■■□□ 2.34
FGFR1-210ENST00000413133 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
FGFR1-210ENST00000413133 ERCC6Q03468 1493 aa29.4■■■□□ 2.3
FGFR1-210ENST00000413133 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
FGFR1-210ENST00000413133 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
FGFR1-210ENST00000413133 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
FGFR1-210ENST00000413133 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
FGFR1-210ENST00000413133 NESP48681 1621 aa29.07■■■□□ 2.24
FGFR1-210ENST00000413133 THOC2Q8NI27 1593 aaKnown RBP29.06■■■□□ 2.24
FGFR1-210ENST00000413133 PEG3Q9GZU2 1588 aa28.98■■■□□ 2.23
FGFR1-210ENST00000413133 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
FGFR1-210ENST00000413133 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
FGFR1-210ENST00000413133 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
FGFR1-210ENST00000413133 KIF21AQ7Z4S6 1674 aa28.82■■■□□ 2.2
FGFR1-210ENST00000413133 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
FGFR1-210ENST00000413133 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
FGFR1-210ENST00000413133 WDR62O43379 1518 aa28.53■■■□□ 2.16
FGFR1-210ENST00000413133 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
FGFR1-210ENST00000413133 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
FGFR1-210ENST00000413133 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
FGFR1-210ENST00000413133 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
FGFR1-210ENST00000413133 WIZO95785 1651 aa28.25■■■□□ 2.11
FGFR1-210ENST00000413133 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
FGFR1-210ENST00000413133 CFTRP13569 1480 aa28.11■■■□□ 2.09
FGFR1-210ENST00000413133 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
FGFR1-210ENST00000413133 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
FGFR1-210ENST00000413133 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
FGFR1-210ENST00000413133 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
FGFR1-210ENST00000413133 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
FGFR1-210ENST00000413133 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.06
FGFR1-210ENST00000413133 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.06
FGFR1-210ENST00000413133 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.06
FGFR1-210ENST00000413133 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
FGFR1-210ENST00000413133 ARHGEF11O15085 1522 aa27.73■■■□□ 2.03
FGFR1-210ENST00000413133 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
FGFR1-210ENST00000413133 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
FGFR1-210ENST00000413133 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
FGFR1-210ENST00000413133 ABCC8Q09428 1581 aa27.55■■■□□ 2
FGFR1-210ENST00000413133 CHD1O14646 1710 aa27.52■■■□□ 2
FGFR1-210ENST00000413133 CCDC88BA6NC98 1476 aa27.51■■□□□ 1.99
FGFR1-210ENST00000413133 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
FGFR1-210ENST00000413133 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
FGFR1-210ENST00000413133 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
FGFR1-210ENST00000413133 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
FGFR1-210ENST00000413133 CYB5RLQ6IPT4 315 aa27.35■■□□□ 1.97
FGFR1-210ENST00000413133 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
FGFR1-210ENST00000413133 POLA1P09884 1462 aaPredicted RBP27.28■■□□□ 1.96
FGFR1-210ENST00000413133 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
FGFR1-210ENST00000413133 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
FGFR1-210ENST00000413133 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
FGFR1-210ENST00000413133 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
FGFR1-210ENST00000413133 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
FGFR1-210ENST00000413133 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
FGFR1-210ENST00000413133 FBLN2P98095 1184 aa27.08■■□□□ 1.93
FGFR1-210ENST00000413133 MAGI1Q96QZ7 1491 aaPredicted RBP27.07■■□□□ 1.92
FGFR1-210ENST00000413133 SOGA1O94964 1423 aa27.06■■□□□ 1.92
FGFR1-210ENST00000413133 TDRD9Q8NDG6 1382 aaKnown RBP27.03■■□□□ 1.92
FGFR1-210ENST00000413133 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
FGFR1-210ENST00000413133 GRIN2BQ13224 1484 aa26.97■■□□□ 1.91
FGFR1-210ENST00000413133 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
FGFR1-210ENST00000413133 CUX1P39880 1505 aa26.93■■□□□ 1.9
FGFR1-210ENST00000413133 PBRM1Q86U86 1689 aa26.92■■□□□ 1.9
FGFR1-210ENST00000413133 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
FGFR1-210ENST00000413133 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
FGFR1-210ENST00000413133 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
FGFR1-210ENST00000413133 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
FGFR1-210ENST00000413133 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
FGFR1-210ENST00000413133 ERCC6L2Q5T890 1561 aa26.64■■□□□ 1.86
FGFR1-210ENST00000413133 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
FGFR1-210ENST00000413133 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
FGFR1-210ENST00000413133 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
FGFR1-210ENST00000413133 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
FGFR1-210ENST00000413133 NUP160Q12769 1436 aa26.6■■□□□ 1.85
FGFR1-210ENST00000413133 KIF13AQ9H1H9 1805 aa26.55■■□□□ 1.84
FGFR1-210ENST00000413133 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
FGFR1-210ENST00000413133 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
FGFR1-210ENST00000413133 FHAD1B1AJZ9 1412 aa26.43■■□□□ 1.82
FGFR1-210ENST00000413133 ERICH3Q5RHP9 1530 aa26.41■■□□□ 1.82
FGFR1-210ENST00000413133 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
FGFR1-210ENST00000413133 MAPKBP1O60336 1514 aa26.28■■□□□ 1.8
FGFR1-210ENST00000413133 PRG4Q92954 1404 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms