RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
CSGALNACT1-216ENST00000524213 CCDC180Q9P1Z9 1646 aa35.97■■■■□ 3.35
CSGALNACT1-216ENST00000524213 ABCC9O60706 1549 aa35.33■■■■□ 3.25
CSGALNACT1-216ENST00000524213 RB1CC1Q8TDY2 1594 aa33.91■■■■□ 3.02
CSGALNACT1-216ENST00000524213 NACADO15069 1562 aa33.81■■■■□ 3
CSGALNACT1-216ENST00000524213 DCAF8L2P0C7V8 631 aa33.71■■■□□ 2.99
CSGALNACT1-216ENST00000524213 ZCCHC6Q5VYS8 1495 aaKnown RBP33.55■■■□□ 2.96
CSGALNACT1-216ENST00000524213 MYO15BQ96JP2 1530 aa33.51■■■□□ 2.95
CSGALNACT1-216ENST00000524213 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
CSGALNACT1-216ENST00000524213 UNC13AQ9UPW8 1703 aa33.28■■■□□ 2.92
CSGALNACT1-216ENST00000524213 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
CSGALNACT1-216ENST00000524213 BICRAQ9NZM4 1560 aa32.93■■■□□ 2.86
CSGALNACT1-216ENST00000524213 SCRIBQ14160 1630 aa32.81■■■□□ 2.84
CSGALNACT1-216ENST00000524213 DNAJC5BQ9UF47 199 aa32.58■■■□□ 2.81
CSGALNACT1-216ENST00000524213 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
CSGALNACT1-216ENST00000524213 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
CSGALNACT1-216ENST00000524213 CC2D2AQ9P2K1 1620 aa31.98■■■□□ 2.71
CSGALNACT1-216ENST00000524213 CECR2Q9BXF3 1484 aa31.74■■■□□ 2.67
CSGALNACT1-216ENST00000524213 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
CSGALNACT1-216ENST00000524213 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
CSGALNACT1-216ENST00000524213 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
CSGALNACT1-216ENST00000524213 NCAPD3P42695 1498 aa31.17■■■□□ 2.58
CSGALNACT1-216ENST00000524213 SMARCA2P51531 1590 aa31.14■■■□□ 2.58
CSGALNACT1-216ENST00000524213 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
CSGALNACT1-216ENST00000524213 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
CSGALNACT1-216ENST00000524213 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
CSGALNACT1-216ENST00000524213 BAZ1BQ9UIG0 1483 aaKnown RBP30.92■■■□□ 2.54
CSGALNACT1-216ENST00000524213 WIZO95785 1651 aa30.79■■■□□ 2.52
CSGALNACT1-216ENST00000524213 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
CSGALNACT1-216ENST00000524213 NESP48681 1621 aa30.55■■■□□ 2.48
CSGALNACT1-216ENST00000524213 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
CSGALNACT1-216ENST00000524213 LAMC3Q9Y6N6 1575 aa30.42■■■□□ 2.46
CSGALNACT1-216ENST00000524213 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
CSGALNACT1-216ENST00000524213 KIF21AQ7Z4S6 1674 aa30.24■■■□□ 2.43
CSGALNACT1-216ENST00000524213 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
CSGALNACT1-216ENST00000524213 CUX2O14529 1486 aa30.18■■■□□ 2.42
CSGALNACT1-216ENST00000524213 PDS5BQ9NTI5 1447 aa30.16■■■□□ 2.42
CSGALNACT1-216ENST00000524213 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
CSGALNACT1-216ENST00000524213 CFTRP13569 1480 aa30.05■■■□□ 2.4
CSGALNACT1-216ENST00000524213 CCDC88BA6NC98 1476 aa30.03■■■□□ 2.4
CSGALNACT1-216ENST00000524213 PRDM2Q13029 1718 aa29.94■■■□□ 2.38
CSGALNACT1-216ENST00000524213 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
CSGALNACT1-216ENST00000524213 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
CSGALNACT1-216ENST00000524213 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
CSGALNACT1-216ENST00000524213 WDR62O43379 1518 aa29.83■■■□□ 2.37
CSGALNACT1-216ENST00000524213 SUPT5HO00267 1087 aaKnown RBP29.8■■■□□ 2.36
CSGALNACT1-216ENST00000524213 URB2Q14146 1524 aaKnown RBP29.67■■■□□ 2.34
CSGALNACT1-216ENST00000524213 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
CSGALNACT1-216ENST00000524213 DNAJC5Q9H3Z4 198 aa29.44■■■□□ 2.3
CSGALNACT1-216ENST00000524213 DNMBPQ6XZF7 1577 aa29.41■■■□□ 2.3
CSGALNACT1-216ENST00000524213 ABCC8Q09428 1581 aa29.39■■■□□ 2.29
CSGALNACT1-216ENST00000524213 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
CSGALNACT1-216ENST00000524213 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.26
CSGALNACT1-216ENST00000524213 POLA1P09884 1462 aaPredicted RBP29.18■■■□□ 2.26
CSGALNACT1-216ENST00000524213 TARBP1Q13395 1621 aaKnown RBP29.18■■■□□ 2.26
CSGALNACT1-216ENST00000524213 CUX1P39880 1505 aa29.18■■■□□ 2.26
CSGALNACT1-216ENST00000524213 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
CSGALNACT1-216ENST00000524213 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
CSGALNACT1-216ENST00000524213 RAD54L2Q9Y4B4 1467 aa29.06■■■□□ 2.24
CSGALNACT1-216ENST00000524213 SOGA1O94964 1423 aa29.03■■■□□ 2.24
CSGALNACT1-216ENST00000524213 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.23
CSGALNACT1-216ENST00000524213 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
CSGALNACT1-216ENST00000524213 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
CSGALNACT1-216ENST00000524213 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
CSGALNACT1-216ENST00000524213 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
CSGALNACT1-216ENST00000524213 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
CSGALNACT1-216ENST00000524213 WRNQ14191 1432 aaPredicted RBP eCLIP28.87■■■□□ 2.21
CSGALNACT1-216ENST00000524213 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
CSGALNACT1-216ENST00000524213 CHD1O14646 1710 aa28.83■■■□□ 2.21
CSGALNACT1-216ENST00000524213 ABCA10Q8WWZ4 1543 aa28.78■■■□□ 2.2
CSGALNACT1-216ENST00000524213 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
CSGALNACT1-216ENST00000524213 ABCA5Q8WWZ7 1642 aa28.74■■■□□ 2.19
CSGALNACT1-216ENST00000524213 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
CSGALNACT1-216ENST00000524213 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
CSGALNACT1-216ENST00000524213 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
CSGALNACT1-216ENST00000524213 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
CSGALNACT1-216ENST00000524213 FBLN2P98095 1184 aa28.65■■■□□ 2.18
CSGALNACT1-216ENST00000524213 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
CSGALNACT1-216ENST00000524213 RIMBP3CA6NJZ7 1639 aa28.53■■■□□ 2.16
CSGALNACT1-216ENST00000524213 RIMBP3BA6NNM3 1639 aa28.53■■■□□ 2.16
CSGALNACT1-216ENST00000524213 RIMBP3Q9UFD9 1639 aa28.53■■■□□ 2.16
CSGALNACT1-216ENST00000524213 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
CSGALNACT1-216ENST00000524213 ADAMTS12P58397 1594 aa28.47■■■□□ 2.15
CSGALNACT1-216ENST00000524213 ARHGEF11O15085 1522 aa28.47■■■□□ 2.15
CSGALNACT1-216ENST00000524213 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
CSGALNACT1-216ENST00000524213 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
CSGALNACT1-216ENST00000524213 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
CSGALNACT1-216ENST00000524213 GRIN2AQ12879 1464 aa28.36■■■□□ 2.13
CSGALNACT1-216ENST00000524213 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
CSGALNACT1-216ENST00000524213 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
CSGALNACT1-216ENST00000524213 KIF27Q86VH2 1401 aa28.26■■■□□ 2.12
CSGALNACT1-216ENST00000524213 NUP160Q12769 1436 aa28.23■■■□□ 2.11
CSGALNACT1-216ENST00000524213 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
CSGALNACT1-216ENST00000524213 CUL7Q14999 1698 aa28.19■■■□□ 2.1
CSGALNACT1-216ENST00000524213 IGF1RP08069 1367 aa28.18■■■□□ 2.1
CSGALNACT1-216ENST00000524213 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
CSGALNACT1-216ENST00000524213 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
CSGALNACT1-216ENST00000524213 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
CSGALNACT1-216ENST00000524213 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
CSGALNACT1-216ENST00000524213 CARMIL1Q5VZK9 1371 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms