RNA–Protein interactions for RNA: ENST00000494320.5

RNF8-207, Transcript of ring finger protein 8, humanhuman

TSL 5

Gene RNF8, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-207ENST00000494320 NISCHQ9Y2I1 1504 aa60.12■■■■■ 7.21
RNF8-207ENST00000494320 CCDC180Q9P1Z9 1646 aa53.65■■■■■ 6.18
RNF8-207ENST00000494320 ABCC9O60706 1549 aa52.89■■■■■ 6.06
RNF8-207ENST00000494320 RB1CC1Q8TDY2 1594 aa50.72■■■■■ 5.71
RNF8-207ENST00000494320 NACADO15069 1562 aa50.57■■■■■ 5.69
RNF8-207ENST00000494320 DCAF8L2P0C7V8 631 aa50.43■■■■■ 5.66
RNF8-207ENST00000494320 MYO15BQ96JP2 1530 aa50.15■■■■■ 5.62
RNF8-207ENST00000494320 ZCCHC6Q5VYS8 1495 aaKnown RBP49.97■■■■■ 5.59
RNF8-207ENST00000494320 DCAF1Q9Y4B6 1507 aa49.75■■■■■ 5.56
RNF8-207ENST00000494320 UNC13AQ9UPW8 1703 aa49.49■■■■■ 5.51
RNF8-207ENST00000494320 PABPN1Q86U42 306 aaKnown RBP eCLIP49.35■■■■■ 5.49
RNF8-207ENST00000494320 BICRAQ9NZM4 1560 aa49.15■■■■■ 5.46
RNF8-207ENST00000494320 DNAJC5BQ9UF47 199 aa48.93■■■■■ 5.42
RNF8-207ENST00000494320 SCRIBQ14160 1630 aa48.87■■■■■ 5.41
RNF8-207ENST00000494320 SHROOM4Q9ULL8 1493 aa48.7■■■■■ 5.39
RNF8-207ENST00000494320 EIF4G1Q04637 1599 aaKnown RBP47.92■■■■■ 5.26
RNF8-207ENST00000494320 CC2D2AQ9P2K1 1620 aa47.83■■■■■ 5.25
RNF8-207ENST00000494320 CECR2Q9BXF3 1484 aa47.6■■■■■ 5.21
RNF8-207ENST00000494320 SMARCA4P51532 1647 aa46.72■■■■■ 5.07
RNF8-207ENST00000494320 NCAPD3P42695 1498 aa46.67■■■■■ 5.06
RNF8-207ENST00000494320 BAZ1AQ9NRL2 1556 aaPredicted RBP46.64■■■■■ 5.06
RNF8-207ENST00000494320 ATAD2BQ9ULI0 1458 aa46.6■■■■■ 5.05
RNF8-207ENST00000494320 SMARCA2P51531 1590 aa46.56■■■■■ 5.04
RNF8-207ENST00000494320 HMGXB3Q12766 1538 aa46.38■■■■■ 5.02
RNF8-207ENST00000494320 MROH2BQ7Z745 1585 aa46.3■■■■■ 5
RNF8-207ENST00000494320 PEG3Q9GZU2 1588 aa46.3■■■■■ 5
RNF8-207ENST00000494320 BAZ1BQ9UIG0 1483 aaKnown RBP46.2■■■■■ 4.99
RNF8-207ENST00000494320 WIZO95785 1651 aa45.76■■■■■ 4.92
RNF8-207ENST00000494320 ERCC6Q03468 1493 aa45.66■■■■■ 4.9
RNF8-207ENST00000494320 RSF1Q96T23 1441 aaPredicted RBP45.63■■■■■ 4.9
RNF8-207ENST00000494320 NESP48681 1621 aa45.62■■■■■ 4.89
RNF8-207ENST00000494320 LAMC3Q9Y6N6 1575 aa45.5■■■■■ 4.87
RNF8-207ENST00000494320 CUX2O14529 1486 aa45.35■■■■■ 4.85
RNF8-207ENST00000494320 TOP2AP11388 1531 aaKnown RBP45.29■■■■■ 4.84
RNF8-207ENST00000494320 CADPSQ9ULU8 1353 aa45.29■■■■■ 4.84
RNF8-207ENST00000494320 PDS5BQ9NTI5 1447 aa45.24■■■■■ 4.83
RNF8-207ENST00000494320 KIF21AQ7Z4S6 1674 aa45.06■■■■■ 4.8
RNF8-207ENST00000494320 THOC2Q8NI27 1593 aaKnown RBP45.03■■■■■ 4.8
RNF8-207ENST00000494320 CFTRP13569 1480 aa44.91■■■■■ 4.78
RNF8-207ENST00000494320 MRC2Q9UBG0 1479 aa44.77■■■■■ 4.76
RNF8-207ENST00000494320 CCDC88BA6NC98 1476 aa44.75■■■■■ 4.75
RNF8-207ENST00000494320 FANCD2Q9BXW9 1451 aa44.74■■■■■ 4.75
RNF8-207ENST00000494320 CEP164Q9UPV0 1460 aa44.74■■■■■ 4.75
RNF8-207ENST00000494320 WDR62O43379 1518 aa44.62■■■■■ 4.73
RNF8-207ENST00000494320 PRDM2Q13029 1718 aa44.5■■■■■ 4.71
RNF8-207ENST00000494320 DNAJC5Q9H3Z4 198 aa44.48■■■■■ 4.71
RNF8-207ENST00000494320 URB2Q14146 1524 aaKnown RBP44.3■■■■■ 4.68
RNF8-207ENST00000494320 SUPT5HO00267 1087 aaKnown RBP44.15■■■■■ 4.66
RNF8-207ENST00000494320 ABCC8Q09428 1581 aa44.01■■■■■ 4.64
RNF8-207ENST00000494320 TOPBP1Q92547 1522 aa43.98■■■■■ 4.63
RNF8-207ENST00000494320 DNMBPQ6XZF7 1577 aa43.89■■■■■ 4.62
RNF8-207ENST00000494320 IFT140Q96RY7 1462 aa43.83■■■■■ 4.61
RNF8-207ENST00000494320 ZNF608Q9ULD9 1512 aaPredicted RBP43.63■■■■■ 4.57
RNF8-207ENST00000494320 POLA1P09884 1462 aaPredicted RBP43.57■■■■■ 4.57
RNF8-207ENST00000494320 TARBP1Q13395 1621 aaKnown RBP43.51■■■■■ 4.56
RNF8-207ENST00000494320 CUX1P39880 1505 aa43.46■■■■■ 4.55
RNF8-207ENST00000494320 EIF4G3O43432 1585 aaKnown RBP43.44■■■■■ 4.54
RNF8-207ENST00000494320 OSCARQ8IYS5 282 aa43.43■■■■■ 4.54
RNF8-207ENST00000494320 SOGA1O94964 1423 aa43.4■■■■■ 4.54
RNF8-207ENST00000494320 FGD5Q6ZNL6 1462 aa43.4■■■■■ 4.54
RNF8-207ENST00000494320 RAD54L2Q9Y4B4 1467 aa43.37■■■■■ 4.53
RNF8-207ENST00000494320 AQRO60306 1485 aaKnown RBP eCLIP43.34■■■■■ 4.53
RNF8-207ENST00000494320 TDRD9Q8NDG6 1382 aaKnown RBP43.2■■■■■ 4.51
RNF8-207ENST00000494320 WDR97A6NE52 1622 aa43.2■■■■■ 4.51
RNF8-207ENST00000494320 WRNQ14191 1432 aaPredicted RBP eCLIP43.05■■■■■ 4.48
RNF8-207ENST00000494320 TOP2BQ02880 1626 aa42.99■■■■■ 4.47
RNF8-207ENST00000494320 BIVM-ERCC5R4GMW8 1640 aa42.98■■■■■ 4.47
RNF8-207ENST00000494320 ABCA10Q8WWZ4 1543 aa42.97■■■■■ 4.47
RNF8-207ENST00000494320 GRIN2BQ13224 1484 aa42.96■■■■■ 4.47
RNF8-207ENST00000494320 CHD1O14646 1710 aa42.96■■■■■ 4.47
RNF8-207ENST00000494320 FBLN2P98095 1184 aa42.95■■■■■ 4.47
RNF8-207ENST00000494320 SNAPC4Q5SXM2 1469 aa42.93■■■■■ 4.46
RNF8-207ENST00000494320 SYNJ1O43426 1573 aa42.92■■■■■ 4.46
RNF8-207ENST00000494320 GAPVD1Q14C86 1478 aa42.9■■■■■ 4.46
RNF8-207ENST00000494320 MAGI1Q96QZ7 1491 aaPredicted RBP42.9■■■■■ 4.46
RNF8-207ENST00000494320 ABCA5Q8WWZ7 1642 aa42.82■■■■■ 4.44
RNF8-207ENST00000494320 TRIM41Q8WV44 630 aa42.8■■■■■ 4.44
RNF8-207ENST00000494320 PBRM1Q86U86 1689 aa42.79■■■■■ 4.44
RNF8-207ENST00000494320 CHMP7Q8WUX9 453 aaPredicted RBP42.78■■■■■ 4.44
RNF8-207ENST00000494320 SYNJ2O15056 1496 aa42.74■■■■■ 4.43
RNF8-207ENST00000494320 RIMBP3CA6NJZ7 1639 aa42.7■■■■■ 4.43
RNF8-207ENST00000494320 RIMBP3BA6NNM3 1639 aa42.7■■■■■ 4.43
RNF8-207ENST00000494320 RIMBP3Q9UFD9 1639 aa42.7■■■■■ 4.43
RNF8-207ENST00000494320 ARHGEF11O15085 1522 aa42.66■■■■■ 4.42
RNF8-207ENST00000494320 CLASP1Q7Z460 1538 aa42.51■■■■■ 4.4
RNF8-207ENST00000494320 ERICH3Q5RHP9 1530 aa42.46■■■■■ 4.39
RNF8-207ENST00000494320 ADAMTS12P58397 1594 aa42.44■■■■■ 4.38
RNF8-207ENST00000494320 FHAD1B1AJZ9 1412 aa42.4■■■■■ 4.38
RNF8-207ENST00000494320 GRIN2AQ12879 1464 aa42.39■■■■■ 4.38
RNF8-207ENST00000494320 CYB5RLQ6IPT4 315 aa42.31■■■■■ 4.36
RNF8-207ENST00000494320 ARAP1Q96P48 1450 aa42.27■■■■■ 4.36
RNF8-207ENST00000494320 NUP160Q12769 1436 aa42.22■■■■■ 4.35
RNF8-207ENST00000494320 KIF27Q86VH2 1401 aa42.21■■■■■ 4.35
RNF8-207ENST00000494320 CEP170Q5SW79 1584 aa42.17■■■■■ 4.34
RNF8-207ENST00000494320 IGF1RP08069 1367 aa42.07■■■■■ 4.33
RNF8-207ENST00000494320 CUL7Q14999 1698 aa41.99■■■■■ 4.31
RNF8-207ENST00000494320 SHROOM2Q13796 1616 aa41.95■■■■■ 4.31
RNF8-207ENST00000494320 ERCC6L2Q5T890 1561 aa41.84■■■■■ 4.29
RNF8-207ENST00000494320 RUSC2Q8N2Y8 1516 aa41.83■■■■■ 4.29
RNF8-207ENST00000494320 CARMIL1Q5VZK9 1371 aa41.82■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms