RNA–Protein interactions for RNA: ENST00000575848.5

PAM16-211, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3 BASIC

Gene PAM16, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-211ENST00000575848 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
PAM16-211ENST00000575848 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
PAM16-211ENST00000575848 ABCC9O60706 1549 aa30.68■■■□□ 2.5
PAM16-211ENST00000575848 NACADO15069 1562 aa29.51■■■□□ 2.31
PAM16-211ENST00000575848 RB1CC1Q8TDY2 1594 aa29.49■■■□□ 2.31
PAM16-211ENST00000575848 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
PAM16-211ENST00000575848 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
PAM16-211ENST00000575848 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
PAM16-211ENST00000575848 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PAM16-211ENST00000575848 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
PAM16-211ENST00000575848 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
PAM16-211ENST00000575848 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PAM16-211ENST00000575848 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
PAM16-211ENST00000575848 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
PAM16-211ENST00000575848 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.13
PAM16-211ENST00000575848 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
PAM16-211ENST00000575848 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
PAM16-211ENST00000575848 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
PAM16-211ENST00000575848 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
PAM16-211ENST00000575848 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
PAM16-211ENST00000575848 NCAPD3P42695 1498 aa27.31■■□□□ 1.96
PAM16-211ENST00000575848 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
PAM16-211ENST00000575848 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
PAM16-211ENST00000575848 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
PAM16-211ENST00000575848 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
PAM16-211ENST00000575848 HMGXB3Q12766 1538 aa27.08■■□□□ 1.93
PAM16-211ENST00000575848 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
PAM16-211ENST00000575848 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
PAM16-211ENST00000575848 WIZO95785 1651 aa26.81■■□□□ 1.88
PAM16-211ENST00000575848 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
PAM16-211ENST00000575848 NESP48681 1621 aa26.54■■□□□ 1.84
PAM16-211ENST00000575848 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
PAM16-211ENST00000575848 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
PAM16-211ENST00000575848 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
PAM16-211ENST00000575848 CUX2O14529 1486 aa26.43■■□□□ 1.82
PAM16-211ENST00000575848 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
PAM16-211ENST00000575848 CFTRP13569 1480 aa26.32■■□□□ 1.8
PAM16-211ENST00000575848 CCDC88BA6NC98 1476 aa26.31■■□□□ 1.8
PAM16-211ENST00000575848 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
PAM16-211ENST00000575848 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
PAM16-211ENST00000575848 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
PAM16-211ENST00000575848 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
PAM16-211ENST00000575848 CEP164Q9UPV0 1460 aa26.05■■□□□ 1.76
PAM16-211ENST00000575848 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
PAM16-211ENST00000575848 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
PAM16-211ENST00000575848 WDR62O43379 1518 aa25.96■■□□□ 1.75
PAM16-211ENST00000575848 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
PAM16-211ENST00000575848 URB2Q14146 1524 aaKnown RBP25.86■■□□□ 1.73
PAM16-211ENST00000575848 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
PAM16-211ENST00000575848 TOPBP1Q92547 1522 aa25.69■■□□□ 1.7
PAM16-211ENST00000575848 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
PAM16-211ENST00000575848 IFT140Q96RY7 1462 aa25.55■■□□□ 1.68
PAM16-211ENST00000575848 CUX1P39880 1505 aa25.49■■□□□ 1.67
PAM16-211ENST00000575848 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
PAM16-211ENST00000575848 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
PAM16-211ENST00000575848 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
PAM16-211ENST00000575848 SOGA1O94964 1423 aa25.4■■□□□ 1.66
PAM16-211ENST00000575848 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
PAM16-211ENST00000575848 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
PAM16-211ENST00000575848 WRNQ14191 1432 aaPredicted RBP eCLIP25.33■■□□□ 1.65
PAM16-211ENST00000575848 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.642e-8■■■■■ 38.1
PAM16-211ENST00000575848 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
PAM16-211ENST00000575848 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
PAM16-211ENST00000575848 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
PAM16-211ENST00000575848 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
PAM16-211ENST00000575848 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
PAM16-211ENST00000575848 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
PAM16-211ENST00000575848 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
PAM16-211ENST00000575848 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
PAM16-211ENST00000575848 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
PAM16-211ENST00000575848 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
PAM16-211ENST00000575848 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
PAM16-211ENST00000575848 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
PAM16-211ENST00000575848 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
PAM16-211ENST00000575848 FBLN2P98095 1184 aa24.94■■□□□ 1.58
PAM16-211ENST00000575848 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
PAM16-211ENST00000575848 SYNJ2O15056 1496 aa24.93■■□□□ 1.58
PAM16-211ENST00000575848 CHD1O14646 1710 aa24.91■■□□□ 1.58
PAM16-211ENST00000575848 PBRM1Q86U86 1689 aa24.89■■□□□ 1.58
PAM16-211ENST00000575848 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
PAM16-211ENST00000575848 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
PAM16-211ENST00000575848 RIMBP3CA6NJZ7 1639 aa24.85■■□□□ 1.57
PAM16-211ENST00000575848 RIMBP3BA6NNM3 1639 aa24.85■■□□□ 1.57
PAM16-211ENST00000575848 RIMBP3Q9UFD9 1639 aa24.85■■□□□ 1.57
PAM16-211ENST00000575848 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
PAM16-211ENST00000575848 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
PAM16-211ENST00000575848 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
PAM16-211ENST00000575848 IGF1RP08069 1367 aa24.8■■□□□ 1.56
PAM16-211ENST00000575848 ADAMTS12P58397 1594 aa24.77■■□□□ 1.56
PAM16-211ENST00000575848 GRIN2AQ12879 1464 aa24.75■■□□□ 1.55
PAM16-211ENST00000575848 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
PAM16-211ENST00000575848 NUP160Q12769 1436 aa24.69■■□□□ 1.54
PAM16-211ENST00000575848 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
PAM16-211ENST00000575848 CARMIL1Q5VZK9 1371 aa24.59■■□□□ 1.53
PAM16-211ENST00000575848 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
PAM16-211ENST00000575848 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
PAM16-211ENST00000575848 CUL7Q14999 1698 aa24.56■■□□□ 1.52
PAM16-211ENST00000575848 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
PAM16-211ENST00000575848 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
PAM16-211ENST00000575848 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms