RNA–Protein interactions for RNA: ENST00000526742.5

FGFR1-229, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 657 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-229ENST00000526742 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.32
FGFR1-229ENST00000526742 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
FGFR1-229ENST00000526742 ABCC9O60706 1549 aa19.66■□□□□ 0.74
FGFR1-229ENST00000526742 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
FGFR1-229ENST00000526742 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
FGFR1-229ENST00000526742 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
FGFR1-229ENST00000526742 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
FGFR1-229ENST00000526742 NACADO15069 1562 aa19.1■□□□□ 0.65
FGFR1-229ENST00000526742 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
FGFR1-229ENST00000526742 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
FGFR1-229ENST00000526742 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
FGFR1-229ENST00000526742 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
FGFR1-229ENST00000526742 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
FGFR1-229ENST00000526742 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
FGFR1-229ENST00000526742 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
FGFR1-229ENST00000526742 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
FGFR1-229ENST00000526742 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
FGFR1-229ENST00000526742 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
FGFR1-229ENST00000526742 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
FGFR1-229ENST00000526742 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.46
FGFR1-229ENST00000526742 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
FGFR1-229ENST00000526742 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
FGFR1-229ENST00000526742 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
FGFR1-229ENST00000526742 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
FGFR1-229ENST00000526742 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
FGFR1-229ENST00000526742 WIZO95785 1651 aa17.74■□□□□ 0.43
FGFR1-229ENST00000526742 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
FGFR1-229ENST00000526742 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
FGFR1-229ENST00000526742 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
FGFR1-229ENST00000526742 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
FGFR1-229ENST00000526742 HMGXB3Q12766 1538 aa17.56■□□□□ 0.4
FGFR1-229ENST00000526742 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
FGFR1-229ENST00000526742 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
FGFR1-229ENST00000526742 CFTRP13569 1480 aa17.24■□□□□ 0.35
FGFR1-229ENST00000526742 NESP48681 1621 aa17.18■□□□□ 0.34
FGFR1-229ENST00000526742 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
FGFR1-229ENST00000526742 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.32
FGFR1-229ENST00000526742 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
FGFR1-229ENST00000526742 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
FGFR1-229ENST00000526742 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
FGFR1-229ENST00000526742 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
FGFR1-229ENST00000526742 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
FGFR1-229ENST00000526742 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
FGFR1-229ENST00000526742 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
FGFR1-229ENST00000526742 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
FGFR1-229ENST00000526742 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
FGFR1-229ENST00000526742 CUX1P39880 1505 aa16.86■□□□□ 0.29
FGFR1-229ENST00000526742 CUX2O14529 1486 aa16.84■□□□□ 0.29
FGFR1-229ENST00000526742 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
FGFR1-229ENST00000526742 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
FGFR1-229ENST00000526742 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
FGFR1-229ENST00000526742 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
FGFR1-229ENST00000526742 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
FGFR1-229ENST00000526742 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
FGFR1-229ENST00000526742 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
FGFR1-229ENST00000526742 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
FGFR1-229ENST00000526742 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
FGFR1-229ENST00000526742 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
FGFR1-229ENST00000526742 WDR62O43379 1518 aa16.69■□□□□ 0.26
FGFR1-229ENST00000526742 SOGA1O94964 1423 aa16.68■□□□□ 0.26
FGFR1-229ENST00000526742 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
FGFR1-229ENST00000526742 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
FGFR1-229ENST00000526742 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
FGFR1-229ENST00000526742 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
FGFR1-229ENST00000526742 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
FGFR1-229ENST00000526742 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
FGFR1-229ENST00000526742 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
FGFR1-229ENST00000526742 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
FGFR1-229ENST00000526742 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
FGFR1-229ENST00000526742 IGF1RP08069 1367 aa16.54■□□□□ 0.24
FGFR1-229ENST00000526742 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
FGFR1-229ENST00000526742 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-229ENST00000526742 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
FGFR1-229ENST00000526742 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
FGFR1-229ENST00000526742 EEA1Q15075 1411 aa16.49■□□□□ 0.23
FGFR1-229ENST00000526742 LOC105371045A0A1W2PR82 267 aa16.48■□□□□ 0.23
FGFR1-229ENST00000526742 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
FGFR1-229ENST00000526742 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
FGFR1-229ENST00000526742 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
FGFR1-229ENST00000526742 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
FGFR1-229ENST00000526742 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
FGFR1-229ENST00000526742 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
FGFR1-229ENST00000526742 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
FGFR1-229ENST00000526742 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
FGFR1-229ENST00000526742 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
FGFR1-229ENST00000526742 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
FGFR1-229ENST00000526742 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
FGFR1-229ENST00000526742 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
FGFR1-229ENST00000526742 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
FGFR1-229ENST00000526742 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
FGFR1-229ENST00000526742 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
FGFR1-229ENST00000526742 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
FGFR1-229ENST00000526742 FBLN2P98095 1184 aa16.21■□□□□ 0.19
FGFR1-229ENST00000526742 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
FGFR1-229ENST00000526742 KIF21BO75037 1637 aa16.2■□□□□ 0.18
FGFR1-229ENST00000526742 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
FGFR1-229ENST00000526742 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
FGFR1-229ENST00000526742 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
FGFR1-229ENST00000526742 CUL7Q14999 1698 aa16.14■□□□□ 0.17
FGFR1-229ENST00000526742 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms