RNA–Protein interactions for RNA: ENST00000544543.5

ACSF3-215, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 5

Gene ACSF3, Length 883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-215ENST00000544543 NISCHQ9Y2I1 1504 aa33.1■■■□□ 2.89
ACSF3-215ENST00000544543 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
ACSF3-215ENST00000544543 ABCC9O60706 1549 aa29.34■■■□□ 2.29
ACSF3-215ENST00000544543 RB1CC1Q8TDY2 1594 aa28.08■■■□□ 2.09
ACSF3-215ENST00000544543 NACADO15069 1562 aa27.95■■■□□ 2.07
ACSF3-215ENST00000544543 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
ACSF3-215ENST00000544543 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
ACSF3-215ENST00000544543 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
ACSF3-215ENST00000544543 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
ACSF3-215ENST00000544543 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
ACSF3-215ENST00000544543 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
ACSF3-215ENST00000544543 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
ACSF3-215ENST00000544543 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
ACSF3-215ENST00000544543 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
ACSF3-215ENST00000544543 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
ACSF3-215ENST00000544543 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
ACSF3-215ENST00000544543 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
ACSF3-215ENST00000544543 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
ACSF3-215ENST00000544543 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
ACSF3-215ENST00000544543 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
ACSF3-215ENST00000544543 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
ACSF3-215ENST00000544543 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
ACSF3-215ENST00000544543 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
ACSF3-215ENST00000544543 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
ACSF3-215ENST00000544543 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
ACSF3-215ENST00000544543 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
ACSF3-215ENST00000544543 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
ACSF3-215ENST00000544543 NESP48681 1621 aa25.3■■□□□ 1.64
ACSF3-215ENST00000544543 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
ACSF3-215ENST00000544543 WIZO95785 1651 aa25.25■■□□□ 1.63
ACSF3-215ENST00000544543 CUX2O14529 1486 aa25.23■■□□□ 1.63
ACSF3-215ENST00000544543 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
ACSF3-215ENST00000544543 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
ACSF3-215ENST00000544543 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
ACSF3-215ENST00000544543 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
ACSF3-215ENST00000544543 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
ACSF3-215ENST00000544543 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
ACSF3-215ENST00000544543 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
ACSF3-215ENST00000544543 WDR62O43379 1518 aa24.8■■□□□ 1.56
ACSF3-215ENST00000544543 MRC2Q9UBG0 1479 aa24.79■■□□□ 1.56
ACSF3-215ENST00000544543 DNAJC5Q9H3Z4 198 aa24.79■■□□□ 1.56
ACSF3-215ENST00000544543 CFTRP13569 1480 aa24.76■■□□□ 1.55
ACSF3-215ENST00000544543 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
ACSF3-215ENST00000544543 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
ACSF3-215ENST00000544543 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
ACSF3-215ENST00000544543 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
ACSF3-215ENST00000544543 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
ACSF3-215ENST00000544543 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
ACSF3-215ENST00000544543 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
ACSF3-215ENST00000544543 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
ACSF3-215ENST00000544543 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
ACSF3-215ENST00000544543 ZNF608Q9ULD9 1512 aaPredicted RBP24.17■■□□□ 1.46
ACSF3-215ENST00000544543 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
ACSF3-215ENST00000544543 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
ACSF3-215ENST00000544543 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
ACSF3-215ENST00000544543 CUX1P39880 1505 aa23.99■■□□□ 1.43
ACSF3-215ENST00000544543 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
ACSF3-215ENST00000544543 CHD1O14646 1710 aa23.93■■□□□ 1.42
ACSF3-215ENST00000544543 WDR97A6NE52 1622 aa23.93■■□□□ 1.42
ACSF3-215ENST00000544543 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
ACSF3-215ENST00000544543 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
ACSF3-215ENST00000544543 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
ACSF3-215ENST00000544543 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
ACSF3-215ENST00000544543 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
ACSF3-215ENST00000544543 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
ACSF3-215ENST00000544543 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
ACSF3-215ENST00000544543 SOGA1O94964 1423 aa23.82■■□□□ 1.4
ACSF3-215ENST00000544543 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
ACSF3-215ENST00000544543 ARHGEF11O15085 1522 aa23.75■■□□□ 1.39
ACSF3-215ENST00000544543 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
ACSF3-215ENST00000544543 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
ACSF3-215ENST00000544543 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
ACSF3-215ENST00000544543 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
ACSF3-215ENST00000544543 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
ACSF3-215ENST00000544543 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
ACSF3-215ENST00000544543 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
ACSF3-215ENST00000544543 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
ACSF3-215ENST00000544543 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
ACSF3-215ENST00000544543 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
ACSF3-215ENST00000544543 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
ACSF3-215ENST00000544543 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
ACSF3-215ENST00000544543 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
ACSF3-215ENST00000544543 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
ACSF3-215ENST00000544543 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
ACSF3-215ENST00000544543 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
ACSF3-215ENST00000544543 FBLN2P98095 1184 aa23.52■■□□□ 1.36
ACSF3-215ENST00000544543 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
ACSF3-215ENST00000544543 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
ACSF3-215ENST00000544543 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.34
ACSF3-215ENST00000544543 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
ACSF3-215ENST00000544543 NUP160Q12769 1436 aa23.33■■□□□ 1.33
ACSF3-215ENST00000544543 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
ACSF3-215ENST00000544543 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
ACSF3-215ENST00000544543 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
ACSF3-215ENST00000544543 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
ACSF3-215ENST00000544543 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
ACSF3-215ENST00000544543 CUL7Q14999 1698 aa23.15■■□□□ 1.3
ACSF3-215ENST00000544543 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
ACSF3-215ENST00000544543 IGF1RP08069 1367 aa23.01■■□□□ 1.27
ACSF3-215ENST00000544543 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms