RNA–Protein interactions for RNA: ENST00000374708.8

COL11A2-203, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL11A2, Length 6,209 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-203ENST00000374708 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
COL11A2-203ENST00000374708 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
COL11A2-203ENST00000374708 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
COL11A2-203ENST00000374708 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
COL11A2-203ENST00000374708 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
COL11A2-203ENST00000374708 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.36
COL11A2-203ENST00000374708 APLP2Q06481 763 aa23.54■■□□□ 1.36
COL11A2-203ENST00000374708 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
COL11A2-203ENST00000374708 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
COL11A2-203ENST00000374708 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
COL11A2-203ENST00000374708 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
COL11A2-203ENST00000374708 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
COL11A2-203ENST00000374708 ERICH6Q7L0X2 663 aa22.62■■□□□ 1.21
COL11A2-203ENST00000374708 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
COL11A2-203ENST00000374708 TRIM41Q8WV44 630 aa22.51■■□□□ 1.19
COL11A2-203ENST00000374708 CENPBP07199 599 aaPredicted RBP22.45■■□□□ 1.18
COL11A2-203ENST00000374708 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
COL11A2-203ENST00000374708 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
COL11A2-203ENST00000374708 NEFLP07196 543 aa22.2■■□□□ 1.15
COL11A2-203ENST00000374708 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
COL11A2-203ENST00000374708 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
COL11A2-203ENST00000374708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
COL11A2-203ENST00000374708 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
COL11A2-203ENST00000374708 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
COL11A2-203ENST00000374708 POLR3GLQ9BT43 218 aa21.82■■□□□ 1.08
COL11A2-203ENST00000374708 ITGAEP38570 1179 aa21.76■■□□□ 1.07
COL11A2-203ENST00000374708 DAXXQ9UER7 740 aaPredicted RBP21.74■■□□□ 1.07
COL11A2-203ENST00000374708 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
COL11A2-203ENST00000374708 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.04
COL11A2-203ENST00000374708 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
COL11A2-203ENST00000374708 CNGB1Q14028 1251 aaPredicted RBP21.52■■□□□ 1.04
COL11A2-203ENST00000374708 MYT1Q01538 1121 aa21.41■■□□□ 1.02
COL11A2-203ENST00000374708 CLSPNQ9HAW4 1339 aa21.25■□□□□ 0.99
COL11A2-203ENST00000374708 HRCP23327 699 aa21.24■□□□□ 0.99
COL11A2-203ENST00000374708 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
COL11A2-203ENST00000374708 LOC105371045A0A1W2PR82 267 aa21.2■□□□□ 0.98
COL11A2-203ENST00000374708 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
COL11A2-203ENST00000374708 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
COL11A2-203ENST00000374708 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
COL11A2-203ENST00000374708 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
COL11A2-203ENST00000374708 FBLN2P98095 1184 aa20.98■□□□□ 0.95
COL11A2-203ENST00000374708 ZBTB47Q9UFB7 747 aaPredicted RBP20.97■□□□□ 0.95
COL11A2-203ENST00000374708 NEUROD1Q13562 356 aa20.97■□□□□ 0.95
COL11A2-203ENST00000374708 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
COL11A2-203ENST00000374708 SLC24A1O60721 1099 aa20.9■□□□□ 0.94
COL11A2-203ENST00000374708 BCANQ96GW7 911 aa20.9■□□□□ 0.94
COL11A2-203ENST00000374708 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
COL11A2-203ENST00000374708 ABCC9O60706 1549 aa20.87■□□□□ 0.93
COL11A2-203ENST00000374708 NEFMP07197 916 aa20.79■□□□□ 0.92
COL11A2-203ENST00000374708 ANP32CO43423 234 aa20.78■□□□□ 0.92
COL11A2-203ENST00000374708 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
COL11A2-203ENST00000374708 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
COL11A2-203ENST00000374708 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
COL11A2-203ENST00000374708 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
COL11A2-203ENST00000374708 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
COL11A2-203ENST00000374708 P3H3Q8IVL6 736 aa20.58■□□□□ 0.89
COL11A2-203ENST00000374708 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
COL11A2-203ENST00000374708 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
COL11A2-203ENST00000374708 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
COL11A2-203ENST00000374708 CHGAP10645 457 aaKnown RBP20.42■□□□□ 0.86
COL11A2-203ENST00000374708 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
COL11A2-203ENST00000374708 GTF3C3Q9Y5Q9 886 aa20.33■□□□□ 0.85
COL11A2-203ENST00000374708 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
COL11A2-203ENST00000374708 ANP32AP39687 249 aaKnown RBP20.3■□□□□ 0.84
COL11A2-203ENST00000374708 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
COL11A2-203ENST00000374708 HSP90AA1P07900 732 aaKnown RBP20.21■□□□□ 0.83
COL11A2-203ENST00000374708 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
COL11A2-203ENST00000374708 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
COL11A2-203ENST00000374708 UPF2Q9HAU5 1272 aaKnown RBP20.14■□□□□ 0.81
COL11A2-203ENST00000374708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
COL11A2-203ENST00000374708 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
COL11A2-203ENST00000374708 FAM9BQ8IZU0 186 aa20.04■□□□□ 0.8
COL11A2-203ENST00000374708 A0A0G2JS52 829 aa20.02■□□□□ 0.8
COL11A2-203ENST00000374708 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.8
COL11A2-203ENST00000374708 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.79
COL11A2-203ENST00000374708 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
COL11A2-203ENST00000374708 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
COL11A2-203ENST00000374708 HNRNPUQ00839 825 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL11A2-203ENST00000374708 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL11A2-203ENST00000374708 SCRIBQ14160 1630 aa20■□□□□ 0.79
COL11A2-203ENST00000374708 GOLGA6L2Q8N9W4 650 aaPredicted RBP20■□□□□ 0.79
COL11A2-203ENST00000374708 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
COL11A2-203ENST00000374708 FKBP8Q14318 412 aa19.97■□□□□ 0.79
COL11A2-203ENST00000374708 KDM2AQ9Y2K7 1162 aa19.94■□□□□ 0.78
COL11A2-203ENST00000374708 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
COL11A2-203ENST00000374708 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
COL11A2-203ENST00000374708 ZBTB7CA1YPR0 619 aa19.93■□□□□ 0.78
COL11A2-203ENST00000374708 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
COL11A2-203ENST00000374708 C14orf37Q86TY3 774 aa19.89■□□□□ 0.77
COL11A2-203ENST00000374708 MYH16Q9H6N6 1097 aa19.89■□□□□ 0.77
COL11A2-203ENST00000374708 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
COL11A2-203ENST00000374708 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
COL11A2-203ENST00000374708 MTUS2Q5JR59 1369 aa19.85■□□□□ 0.77
COL11A2-203ENST00000374708 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
COL11A2-203ENST00000374708 CDK11BP21127 795 aaKnown RBP19.84■□□□□ 0.77
COL11A2-203ENST00000374708 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
COL11A2-203ENST00000374708 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
COL11A2-203ENST00000374708 HAP1P54257 671 aaPredicted RBP19.78■□□□□ 0.76
COL11A2-203ENST00000374708 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
COL11A2-203ENST00000374708 EIF5BO60841 1220 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms