RNA–Protein interactions for RNA: ENST00000543852.5

KDM2B-217, Transcript of lysine demethylase 2B, humanhuman

TSL 5 BASIC

Gene KDM2B, Length 1,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-217ENST00000543852 NISCHQ9Y2I1 1504 aa47.01■■■■■ 5.12
KDM2B-217ENST00000543852 AEBP2Q6ZN18 517 aaPredicted RBP45.93■■■■■ 4.94
KDM2B-217ENST00000543852 CHIC1Q5VXU3 224 aa43.73■■■■■ 4.59
KDM2B-217ENST00000543852 CCDC180Q9P1Z9 1646 aa41.86■■■■■ 4.29
KDM2B-217ENST00000543852 ABCC9O60706 1549 aa40.96■■■■■ 4.15
KDM2B-217ENST00000543852 RB1CC1Q8TDY2 1594 aa39.45■■■■□ 3.91
KDM2B-217ENST00000543852 NACADO15069 1562 aa39.39■■■■□ 3.9
KDM2B-217ENST00000543852 DCAF8L2P0C7V8 631 aa39.29■■■■□ 3.88
KDM2B-217ENST00000543852 SENP3Q9H4L4 574 aaPredicted RBP39.24■■■■□ 3.87
KDM2B-217ENST00000543852 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
KDM2B-217ENST00000543852 ZCCHC6Q5VYS8 1495 aaKnown RBP39.15■■■■□ 3.86
KDM2B-217ENST00000543852 DCAF1Q9Y4B6 1507 aa38.94■■■■□ 3.82
KDM2B-217ENST00000543852 PHF23Q9BUL5 403 aaPredicted RBP38.72■■■■□ 3.79
KDM2B-217ENST00000543852 UNC13AQ9UPW8 1703 aa38.44■■■■□ 3.74
KDM2B-217ENST00000543852 PABPN1Q86U42 306 aaKnown RBP eCLIP38.25■■■■□ 3.71
KDM2B-217ENST00000543852 BICRAQ9NZM4 1560 aa38.17■■■■□ 3.7
KDM2B-217ENST00000543852 SCRIBQ14160 1630 aa38.13■■■■□ 3.69
KDM2B-217ENST00000543852 DNAJC5BQ9UF47 199 aa37.92■■■■□ 3.66
KDM2B-217ENST00000543852 SHROOM4Q9ULL8 1493 aa37.91■■■■□ 3.66
KDM2B-217ENST00000543852 EIF4G1Q04637 1599 aaKnown RBP37.21■■■■□ 3.55
KDM2B-217ENST00000543852 CC2D2AQ9P2K1 1620 aa37.07■■■■□ 3.52
KDM2B-217ENST00000543852 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
KDM2B-217ENST00000543852 FOXD1Q16676 465 aa36.52■■■■□ 3.44
KDM2B-217ENST00000543852 SMARCA4P51532 1647 aa36.49■■■■□ 3.43
KDM2B-217ENST00000543852 BAZ1AQ9NRL2 1556 aaPredicted RBP36.49■■■■□ 3.43
KDM2B-217ENST00000543852 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
KDM2B-217ENST00000543852 SMARCA2P51531 1590 aa36.32■■■■□ 3.4
KDM2B-217ENST00000543852 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
KDM2B-217ENST00000543852 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
KDM2B-217ENST00000543852 PEG3Q9GZU2 1588 aa36.16■■■■□ 3.38
KDM2B-217ENST00000543852 HMGXB3Q12766 1538 aa36.16■■■■□ 3.38
KDM2B-217ENST00000543852 BAZ1BQ9UIG0 1483 aaKnown RBP36.04■■■■□ 3.36
KDM2B-217ENST00000543852 WIZO95785 1651 aa35.78■■■■□ 3.32
KDM2B-217ENST00000543852 RSF1Q96T23 1441 aaPredicted RBP35.77■■■■□ 3.32
KDM2B-217ENST00000543852 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
KDM2B-217ENST00000543852 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
KDM2B-217ENST00000543852 NESP48681 1621 aa35.39■■■■□ 3.26
KDM2B-217ENST00000543852 ERCC6Q03468 1493 aa35.38■■■■□ 3.25
KDM2B-217ENST00000543852 CADPSQ9ULU8 1353 aa35.27■■■■□ 3.24
KDM2B-217ENST00000543852 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
KDM2B-217ENST00000543852 CUX2O14529 1486 aa35.04■■■■□ 3.2
KDM2B-217ENST00000543852 CFTRP13569 1480 aa35.04■■■■□ 3.2
KDM2B-217ENST00000543852 PLPPR3Q6T4P5 718 aa35.02■■■■□ 3.2
KDM2B-217ENST00000543852 CCDC88BA6NC98 1476 aa35.02■■■■□ 3.2
KDM2B-217ENST00000543852 KIF21AQ7Z4S6 1674 aa34.99■■■■□ 3.19
KDM2B-217ENST00000543852 THOC2Q8NI27 1593 aaKnown RBP34.91■■■■□ 3.18
KDM2B-217ENST00000543852 FANCD2Q9BXW9 1451 aa34.85■■■■□ 3.17
KDM2B-217ENST00000543852 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
KDM2B-217ENST00000543852 MRC2Q9UBG0 1479 aa34.79■■■■□ 3.16
KDM2B-217ENST00000543852 SUPT5HO00267 1087 aaKnown RBP34.79■■■■□ 3.16
KDM2B-217ENST00000543852 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
KDM2B-217ENST00000543852 WDR62O43379 1518 aa34.68■■■■□ 3.14
KDM2B-217ENST00000543852 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
KDM2B-217ENST00000543852 URB2Q14146 1524 aaKnown RBP34.47■■■■□ 3.11
KDM2B-217ENST00000543852 ABCC8Q09428 1581 aa34.35■■■■□ 3.09
KDM2B-217ENST00000543852 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
KDM2B-217ENST00000543852 DNMBPQ6XZF7 1577 aa34.25■■■■□ 3.07
KDM2B-217ENST00000543852 MSH5O43196 834 aa34.21■■■■□ 3.07
KDM2B-217ENST00000543852 PIAS4Q8N2W9 510 aaPredicted RBP34.2■■■■□ 3.07
KDM2B-217ENST00000543852 PPP6R1Q9UPN7 881 aa34.17■■■■□ 3.06
KDM2B-217ENST00000543852 IFT140Q96RY7 1462 aa34.12■■■■□ 3.05
KDM2B-217ENST00000543852 ADRA2BP18089 450 aa34.1■■■■□ 3.05
KDM2B-217ENST00000543852 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
KDM2B-217ENST00000543852 CUX1P39880 1505 aa33.96■■■■□ 3.03
KDM2B-217ENST00000543852 TARBP1Q13395 1621 aaKnown RBP33.89■■■■□ 3.02
KDM2B-217ENST00000543852 ZNF608Q9ULD9 1512 aaPredicted RBP33.89■■■■□ 3.02
KDM2B-217ENST00000543852 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
KDM2B-217ENST00000543852 SOGA1O94964 1423 aa33.85■■■■□ 3.01
KDM2B-217ENST00000543852 RAD54L2Q9Y4B4 1467 aa33.8■■■■□ 3
KDM2B-217ENST00000543852 EIF4G3O43432 1585 aaKnown RBP33.79■■■■□ 3
KDM2B-217ENST00000543852 WRNQ14191 1432 aaPredicted RBP eCLIP33.77■■■■□ 3
KDM2B-217ENST00000543852 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
KDM2B-217ENST00000543852 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.99
KDM2B-217ENST00000543852 TOP2BQ02880 1626 aa33.69■■■□□ 2.98
KDM2B-217ENST00000543852 BIVM-ERCC5R4GMW8 1640 aa33.68■■■□□ 2.98
KDM2B-217ENST00000543852 SYNJ1O43426 1573 aa33.64■■■□□ 2.98
KDM2B-217ENST00000543852 TDRD9Q8NDG6 1382 aaKnown RBP33.63■■■□□ 2.97
KDM2B-217ENST00000543852 ABCA10Q8WWZ4 1543 aa33.58■■■□□ 2.97
KDM2B-217ENST00000543852 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
KDM2B-217ENST00000543852 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
KDM2B-217ENST00000543852 GAPVD1Q14C86 1478 aa33.47■■■□□ 2.95
KDM2B-217ENST00000543852 MAGI1Q96QZ7 1491 aaPredicted RBP33.43■■■□□ 2.94
KDM2B-217ENST00000543852 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
KDM2B-217ENST00000543852 SNAPC4Q5SXM2 1469 aa33.42■■■□□ 2.94
KDM2B-217ENST00000543852 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
KDM2B-217ENST00000543852 FBLN2P98095 1184 aa33.35■■■□□ 2.93
KDM2B-217ENST00000543852 CHD1O14646 1710 aa33.34■■■□□ 2.93
KDM2B-217ENST00000543852 CHMP7Q8WUX9 453 aaPredicted RBP33.28■■■□□ 2.92
KDM2B-217ENST00000543852 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
KDM2B-217ENST00000543852 POTEDQ86YR6 584 aa33.2■■■□□ 2.91
KDM2B-217ENST00000543852 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
KDM2B-217ENST00000543852 TRIM41Q8WV44 630 aa33.17■■■□□ 2.9
KDM2B-217ENST00000543852 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
KDM2B-217ENST00000543852 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
KDM2B-217ENST00000543852 KIF27Q86VH2 1401 aa33.1■■■□□ 2.89
KDM2B-217ENST00000543852 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
KDM2B-217ENST00000543852 CLASP1Q7Z460 1538 aa33.02■■■□□ 2.88
KDM2B-217ENST00000543852 ARHGEF11O15085 1522 aa32.99■■■□□ 2.87
KDM2B-217ENST00000543852 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
KDM2B-217ENST00000543852 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms