RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-233ENST00000529552 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
FGFR1-233ENST00000529552 NISCHQ9Y2I1 1504 aa22.95■■□□□ 1.26
FGFR1-233ENST00000529552 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
FGFR1-233ENST00000529552 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
FGFR1-233ENST00000529552 ABCC9O60706 1549 aa20.69■□□□□ 0.9
FGFR1-233ENST00000529552 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
FGFR1-233ENST00000529552 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
FGFR1-233ENST00000529552 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
FGFR1-233ENST00000529552 NACADO15069 1562 aa19.56■□□□□ 0.72
FGFR1-233ENST00000529552 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
FGFR1-233ENST00000529552 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
FGFR1-233ENST00000529552 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
FGFR1-233ENST00000529552 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
FGFR1-233ENST00000529552 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
FGFR1-233ENST00000529552 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.65
FGFR1-233ENST00000529552 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
FGFR1-233ENST00000529552 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
FGFR1-233ENST00000529552 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
FGFR1-233ENST00000529552 SCRIBQ14160 1630 aa18.83■□□□□ 0.61
FGFR1-233ENST00000529552 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
FGFR1-233ENST00000529552 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
FGFR1-233ENST00000529552 CECR2Q9BXF3 1484 aa18.66■□□□□ 0.58
FGFR1-233ENST00000529552 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
FGFR1-233ENST00000529552 FOXD1Q16676 465 aa18.36■□□□□ 0.53
FGFR1-233ENST00000529552 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
FGFR1-233ENST00000529552 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
FGFR1-233ENST00000529552 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
FGFR1-233ENST00000529552 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
FGFR1-233ENST00000529552 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
FGFR1-233ENST00000529552 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
FGFR1-233ENST00000529552 CUX2O14529 1486 aa17.91■□□□□ 0.46
FGFR1-233ENST00000529552 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.45
FGFR1-233ENST00000529552 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
FGFR1-233ENST00000529552 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
FGFR1-233ENST00000529552 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
FGFR1-233ENST00000529552 NESP48681 1621 aa17.73■□□□□ 0.43
FGFR1-233ENST00000529552 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
FGFR1-233ENST00000529552 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
FGFR1-233ENST00000529552 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
FGFR1-233ENST00000529552 ADRA2BP18089 450 aa17.65■□□□□ 0.42
FGFR1-233ENST00000529552 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
FGFR1-233ENST00000529552 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
FGFR1-233ENST00000529552 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
FGFR1-233ENST00000529552 WIZO95785 1651 aa17.48■□□□□ 0.39
FGFR1-233ENST00000529552 CADPSQ9ULU8 1353 aa17.46■□□□□ 0.39
FGFR1-233ENST00000529552 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
FGFR1-233ENST00000529552 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
FGFR1-233ENST00000529552 WDR62O43379 1518 aa17.37■□□□□ 0.37
FGFR1-233ENST00000529552 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
FGFR1-233ENST00000529552 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
FGFR1-233ENST00000529552 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
FGFR1-233ENST00000529552 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
FGFR1-233ENST00000529552 CFTRP13569 1480 aa17.25■□□□□ 0.35
FGFR1-233ENST00000529552 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
FGFR1-233ENST00000529552 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
FGFR1-233ENST00000529552 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
FGFR1-233ENST00000529552 MSH5O43196 834 aa17.07■□□□□ 0.32
FGFR1-233ENST00000529552 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
FGFR1-233ENST00000529552 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
FGFR1-233ENST00000529552 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
FGFR1-233ENST00000529552 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
FGFR1-233ENST00000529552 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
FGFR1-233ENST00000529552 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
FGFR1-233ENST00000529552 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
FGFR1-233ENST00000529552 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
FGFR1-233ENST00000529552 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
FGFR1-233ENST00000529552 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
FGFR1-233ENST00000529552 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
FGFR1-233ENST00000529552 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
FGFR1-233ENST00000529552 CHD1O14646 1710 aa16.79■□□□□ 0.28
FGFR1-233ENST00000529552 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
FGFR1-233ENST00000529552 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
FGFR1-233ENST00000529552 AQRO60306 1485 aaKnown RBP eCLIP16.74■□□□□ 0.27
FGFR1-233ENST00000529552 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
FGFR1-233ENST00000529552 FBLN2P98095 1184 aa16.69■□□□□ 0.26
FGFR1-233ENST00000529552 SOGA1O94964 1423 aa16.68■□□□□ 0.26
FGFR1-233ENST00000529552 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
FGFR1-233ENST00000529552 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
FGFR1-233ENST00000529552 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
FGFR1-233ENST00000529552 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
FGFR1-233ENST00000529552 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
FGFR1-233ENST00000529552 CUX1P39880 1505 aa16.61■□□□□ 0.25
FGFR1-233ENST00000529552 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
FGFR1-233ENST00000529552 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
FGFR1-233ENST00000529552 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
FGFR1-233ENST00000529552 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
FGFR1-233ENST00000529552 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
FGFR1-233ENST00000529552 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
FGFR1-233ENST00000529552 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
FGFR1-233ENST00000529552 SYNJ2O15056 1496 aa16.53■□□□□ 0.24
FGFR1-233ENST00000529552 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
FGFR1-233ENST00000529552 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
FGFR1-233ENST00000529552 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
FGFR1-233ENST00000529552 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
FGFR1-233ENST00000529552 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.23
FGFR1-233ENST00000529552 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
FGFR1-233ENST00000529552 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
FGFR1-233ENST00000529552 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
FGFR1-233ENST00000529552 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
FGFR1-233ENST00000529552 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms