RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 NISCHQ9Y2I1 1504 aa49.52■■■■■ 5.52
SLC38A1-208ENST00000550173 CCDC180Q9P1Z9 1646 aa44.35■■■■■ 4.69
SLC38A1-208ENST00000550173 ABCC9O60706 1549 aa44.24■■■■■ 4.67
SLC38A1-208ENST00000550173 RB1CC1Q8TDY2 1594 aa42.16■■■■■ 4.34
SLC38A1-208ENST00000550173 NACADO15069 1562 aa41.9■■■■■ 4.3
SLC38A1-208ENST00000550173 DCAF8L2P0C7V8 631 aa41.83■■■■■ 4.29
SLC38A1-208ENST00000550173 MYO15BQ96JP2 1530 aa41.35■■■■■ 4.21
SLC38A1-208ENST00000550173 DNAJC5BQ9UF47 199 aa41.34■■■■■ 4.21
SLC38A1-208ENST00000550173 PABPN1Q86U42 306 aaKnown RBP eCLIP41.23■■■■■ 4.19
SLC38A1-208ENST00000550173 UNC13AQ9UPW8 1703 aa41.19■■■■■ 4.18
SLC38A1-208ENST00000550173 ZCCHC6Q5VYS8 1495 aaKnown RBP41.06■■■■■ 4.16
SLC38A1-208ENST00000550173 BICRAQ9NZM4 1560 aa40.91■■■■■ 4.14
SLC38A1-208ENST00000550173 DCAF1Q9Y4B6 1507 aa40.89■■■■■ 4.14
SLC38A1-208ENST00000550173 SCRIBQ14160 1630 aa40.45■■■■■ 4.07
SLC38A1-208ENST00000550173 SHROOM4Q9ULL8 1493 aa40.36■■■■■ 4.05
SLC38A1-208ENST00000550173 CC2D2AQ9P2K1 1620 aa39.94■■■■□ 3.99
SLC38A1-208ENST00000550173 EIF4G1Q04637 1599 aaKnown RBP39.89■■■■□ 3.98
SLC38A1-208ENST00000550173 CECR2Q9BXF3 1484 aa39.82■■■■□ 3.97
SLC38A1-208ENST00000550173 NCAPD3P42695 1498 aa38.67■■■■□ 3.78
SLC38A1-208ENST00000550173 SMARCA4P51532 1647 aa38.59■■■■□ 3.77
SLC38A1-208ENST00000550173 ATAD2BQ9ULI0 1458 aa38.59■■■■□ 3.77
SLC38A1-208ENST00000550173 SMARCA2P51531 1590 aa38.5■■■■□ 3.75
SLC38A1-208ENST00000550173 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
SLC38A1-208ENST00000550173 HMGXB3Q12766 1538 aa38.4■■■■□ 3.74
SLC38A1-208ENST00000550173 BAZ1BQ9UIG0 1483 aaKnown RBP38.24■■■■□ 3.71
SLC38A1-208ENST00000550173 ERCC6Q03468 1493 aa38.2■■■■□ 3.71
SLC38A1-208ENST00000550173 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
SLC38A1-208ENST00000550173 MROH2BQ7Z745 1585 aa38.16■■■■□ 3.7
SLC38A1-208ENST00000550173 NESP48681 1621 aa38.05■■■■□ 3.68
SLC38A1-208ENST00000550173 CUX2O14529 1486 aa38.04■■■■□ 3.68
SLC38A1-208ENST00000550173 DNAJC5Q9H3Z4 198 aa37.86■■■■□ 3.65
SLC38A1-208ENST00000550173 LAMC3Q9Y6N6 1575 aa37.79■■■■□ 3.64
SLC38A1-208ENST00000550173 WIZO95785 1651 aa37.72■■■■□ 3.63
SLC38A1-208ENST00000550173 PDS5BQ9NTI5 1447 aa37.59■■■■□ 3.61
SLC38A1-208ENST00000550173 THOC2Q8NI27 1593 aaKnown RBP37.59■■■■□ 3.61
SLC38A1-208ENST00000550173 KIF21AQ7Z4S6 1674 aa37.55■■■■□ 3.6
SLC38A1-208ENST00000550173 CADPSQ9ULU8 1353 aa37.54■■■■□ 3.6
SLC38A1-208ENST00000550173 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
SLC38A1-208ENST00000550173 TOP2AP11388 1531 aaKnown RBP37.25■■■■□ 3.55
SLC38A1-208ENST00000550173 MRC2Q9UBG0 1479 aa37.24■■■■□ 3.55
SLC38A1-208ENST00000550173 CEP164Q9UPV0 1460 aa37.13■■■■□ 3.54
SLC38A1-208ENST00000550173 CFTRP13569 1480 aa37.12■■■■□ 3.53
SLC38A1-208ENST00000550173 WDR62O43379 1518 aa37.11■■■■□ 3.53
SLC38A1-208ENST00000550173 FANCD2Q9BXW9 1451 aa37.11■■■■□ 3.53
SLC38A1-208ENST00000550173 CCDC88BA6NC98 1476 aa36.83■■■■□ 3.49
SLC38A1-208ENST00000550173 URB2Q14146 1524 aaKnown RBP36.78■■■■□ 3.48
SLC38A1-208ENST00000550173 PRDM2Q13029 1718 aa36.76■■■■□ 3.48
SLC38A1-208ENST00000550173 TOPBP1Q92547 1522 aa36.42■■■■□ 3.42
SLC38A1-208ENST00000550173 IFT140Q96RY7 1462 aa36.38■■■■□ 3.41
SLC38A1-208ENST00000550173 OSCARQ8IYS5 282 aa36.38■■■■□ 3.41
SLC38A1-208ENST00000550173 ABCC8Q09428 1581 aa36.36■■■■□ 3.41
SLC38A1-208ENST00000550173 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
SLC38A1-208ENST00000550173 ZNF608Q9ULD9 1512 aaPredicted RBP36.3■■■■□ 3.4
SLC38A1-208ENST00000550173 DNMBPQ6XZF7 1577 aa36.29■■■■□ 3.4
SLC38A1-208ENST00000550173 EIF4G3O43432 1585 aaKnown RBP36.1■■■■□ 3.37
SLC38A1-208ENST00000550173 TARBP1Q13395 1621 aaKnown RBP36.06■■■■□ 3.36
SLC38A1-208ENST00000550173 POLA1P09884 1462 aaPredicted RBP36.05■■■■□ 3.36
SLC38A1-208ENST00000550173 AQRO60306 1485 aaKnown RBP eCLIP36.01■■■■□ 3.36
SLC38A1-208ENST00000550173 SUPT5HO00267 1087 aaKnown RBP35.98■■■■□ 3.35
SLC38A1-208ENST00000550173 RAD54L2Q9Y4B4 1467 aa35.93■■■■□ 3.34
SLC38A1-208ENST00000550173 SOGA1O94964 1423 aa35.92■■■■□ 3.34
SLC38A1-208ENST00000550173 FGD5Q6ZNL6 1462 aa35.86■■■■□ 3.33
SLC38A1-208ENST00000550173 RIMBP3CA6NJZ7 1639 aa35.85■■■■□ 3.33
SLC38A1-208ENST00000550173 RIMBP3BA6NNM3 1639 aa35.85■■■■□ 3.33
SLC38A1-208ENST00000550173 RIMBP3Q9UFD9 1639 aa35.85■■■■□ 3.33
SLC38A1-208ENST00000550173 CUX1P39880 1505 aa35.84■■■■□ 3.33
SLC38A1-208ENST00000550173 TDRD9Q8NDG6 1382 aaKnown RBP35.83■■■■□ 3.33
SLC38A1-208ENST00000550173 CHD1O14646 1710 aa35.82■■■■□ 3.32
SLC38A1-208ENST00000550173 FBLN2P98095 1184 aa35.8■■■■□ 3.32
SLC38A1-208ENST00000550173 ARHGEF11O15085 1522 aa35.75■■■■□ 3.31
SLC38A1-208ENST00000550173 WDR97A6NE52 1622 aa35.7■■■■□ 3.31
SLC38A1-208ENST00000550173 SNAPC4Q5SXM2 1469 aa35.65■■■■□ 3.3
SLC38A1-208ENST00000550173 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
SLC38A1-208ENST00000550173 CHMP7Q8WUX9 453 aaPredicted RBP35.55■■■■□ 3.28
SLC38A1-208ENST00000550173 MAGI1Q96QZ7 1491 aaPredicted RBP35.54■■■■□ 3.28
SLC38A1-208ENST00000550173 CYB5RLQ6IPT4 315 aa35.52■■■■□ 3.28
SLC38A1-208ENST00000550173 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
SLC38A1-208ENST00000550173 ABCA10Q8WWZ4 1543 aa35.45■■■■□ 3.27
SLC38A1-208ENST00000550173 PBRM1Q86U86 1689 aa35.43■■■■□ 3.26
SLC38A1-208ENST00000550173 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
SLC38A1-208ENST00000550173 SYNJ1O43426 1573 aa35.42■■■■□ 3.26
SLC38A1-208ENST00000550173 ARAP1Q96P48 1450 aa35.41■■■■□ 3.26
SLC38A1-208ENST00000550173 CLASP1Q7Z460 1538 aa35.39■■■■□ 3.26
SLC38A1-208ENST00000550173 ABCA5Q8WWZ7 1642 aa35.37■■■■□ 3.25
SLC38A1-208ENST00000550173 WRNQ14191 1432 aaPredicted RBP eCLIP35.37■■■■□ 3.25
SLC38A1-208ENST00000550173 TOP2BQ02880 1626 aa35.32■■■■□ 3.24
SLC38A1-208ENST00000550173 BIVM-ERCC5R4GMW8 1640 aa35.31■■■■□ 3.24
SLC38A1-208ENST00000550173 TRHP20396 242 aaPredicted RBP35.11■■■■□ 3.21
SLC38A1-208ENST00000550173 GRIN2AQ12879 1464 aa35.1■■■■□ 3.21
SLC38A1-208ENST00000550173 ADAMTS12P58397 1594 aa35.1■■■■□ 3.21
SLC38A1-208ENST00000550173 FHAD1B1AJZ9 1412 aa35.03■■■■□ 3.2
SLC38A1-208ENST00000550173 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.19
SLC38A1-208ENST00000550173 NUP160Q12769 1436 aa34.98■■■■□ 3.19
SLC38A1-208ENST00000550173 CEP170Q5SW79 1584 aa34.97■■■■□ 3.19
SLC38A1-208ENST00000550173 ERCC6L2Q5T890 1561 aa34.87■■■■□ 3.17
SLC38A1-208ENST00000550173 SHROOM2Q13796 1616 aa34.79■■■■□ 3.16
SLC38A1-208ENST00000550173 JPH4Q96JJ6 628 aa34.67■■■■□ 3.14
SLC38A1-208ENST00000550173 PRG4Q92954 1404 aaPredicted RBP34.66■■■■□ 3.14
SLC38A1-208ENST00000550173 KIF27Q86VH2 1401 aa34.65■■■■□ 3.14
SLC38A1-208ENST00000550173 IGF1RP08069 1367 aa34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms