RNA–Protein interactions for RNA: ENST00000539394.5

KDM2B-210, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-210ENST00000539394 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
KDM2B-210ENST00000539394 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
KDM2B-210ENST00000539394 ABCC9O60706 1549 aa25.1■■□□□ 1.61
KDM2B-210ENST00000539394 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
KDM2B-210ENST00000539394 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
KDM2B-210ENST00000539394 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
KDM2B-210ENST00000539394 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
KDM2B-210ENST00000539394 NACADO15069 1562 aa24.37■■□□□ 1.49
KDM2B-210ENST00000539394 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
KDM2B-210ENST00000539394 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
KDM2B-210ENST00000539394 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
KDM2B-210ENST00000539394 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
KDM2B-210ENST00000539394 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
KDM2B-210ENST00000539394 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
KDM2B-210ENST00000539394 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
KDM2B-210ENST00000539394 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
KDM2B-210ENST00000539394 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
KDM2B-210ENST00000539394 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
KDM2B-210ENST00000539394 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
KDM2B-210ENST00000539394 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
KDM2B-210ENST00000539394 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
KDM2B-210ENST00000539394 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
KDM2B-210ENST00000539394 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
KDM2B-210ENST00000539394 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
KDM2B-210ENST00000539394 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
KDM2B-210ENST00000539394 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
KDM2B-210ENST00000539394 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
KDM2B-210ENST00000539394 WIZO95785 1651 aa22.4■■□□□ 1.18
KDM2B-210ENST00000539394 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
KDM2B-210ENST00000539394 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
KDM2B-210ENST00000539394 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
KDM2B-210ENST00000539394 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
KDM2B-210ENST00000539394 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
KDM2B-210ENST00000539394 NESP48681 1621 aa21.84■■□□□ 1.09
KDM2B-210ENST00000539394 CFTRP13569 1480 aa21.83■■□□□ 1.08
KDM2B-210ENST00000539394 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
KDM2B-210ENST00000539394 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
KDM2B-210ENST00000539394 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
KDM2B-210ENST00000539394 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
KDM2B-210ENST00000539394 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
KDM2B-210ENST00000539394 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
KDM2B-210ENST00000539394 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
KDM2B-210ENST00000539394 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
KDM2B-210ENST00000539394 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
KDM2B-210ENST00000539394 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
KDM2B-210ENST00000539394 WDR62O43379 1518 aa21.35■■□□□ 1.01
KDM2B-210ENST00000539394 ABCC8Q09428 1581 aa21.3■■□□□ 1
KDM2B-210ENST00000539394 TOPBP1Q92547 1522 aa21.29■■□□□ 1
KDM2B-210ENST00000539394 CUX2O14529 1486 aa21.28■■□□□ 1
KDM2B-210ENST00000539394 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
KDM2B-210ENST00000539394 CUX1P39880 1505 aa21.26■□□□□ 0.99
KDM2B-210ENST00000539394 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
KDM2B-210ENST00000539394 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
KDM2B-210ENST00000539394 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
KDM2B-210ENST00000539394 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
KDM2B-210ENST00000539394 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
KDM2B-210ENST00000539394 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
KDM2B-210ENST00000539394 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
KDM2B-210ENST00000539394 SOGA1O94964 1423 aa21.05■□□□□ 0.96
KDM2B-210ENST00000539394 RAD54L2Q9Y4B4 1467 aa21.04■□□□□ 0.96
KDM2B-210ENST00000539394 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
KDM2B-210ENST00000539394 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
KDM2B-210ENST00000539394 ZNF608Q9ULD9 1512 aaPredicted RBP20.96■□□□□ 0.95
KDM2B-210ENST00000539394 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
KDM2B-210ENST00000539394 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
KDM2B-210ENST00000539394 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
KDM2B-210ENST00000539394 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
KDM2B-210ENST00000539394 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
KDM2B-210ENST00000539394 EIF4G3O43432 1585 aaKnown RBP20.83■□□□□ 0.92
KDM2B-210ENST00000539394 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
KDM2B-210ENST00000539394 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
KDM2B-210ENST00000539394 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
KDM2B-210ENST00000539394 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
KDM2B-210ENST00000539394 IGF1RP08069 1367 aa20.71■□□□□ 0.91
KDM2B-210ENST00000539394 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
KDM2B-210ENST00000539394 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
KDM2B-210ENST00000539394 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
KDM2B-210ENST00000539394 MAGI1Q96QZ7 1491 aaPredicted RBP20.67■□□□□ 0.9
KDM2B-210ENST00000539394 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
KDM2B-210ENST00000539394 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
KDM2B-210ENST00000539394 EEA1Q15075 1411 aa20.6■□□□□ 0.89
KDM2B-210ENST00000539394 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
KDM2B-210ENST00000539394 ADAMTS12P58397 1594 aa20.58■□□□□ 0.88
KDM2B-210ENST00000539394 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
KDM2B-210ENST00000539394 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
KDM2B-210ENST00000539394 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
KDM2B-210ENST00000539394 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
KDM2B-210ENST00000539394 CUL7Q14999 1698 aa20.51■□□□□ 0.87
KDM2B-210ENST00000539394 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
KDM2B-210ENST00000539394 FBLN2P98095 1184 aa20.5■□□□□ 0.87
KDM2B-210ENST00000539394 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
KDM2B-210ENST00000539394 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
KDM2B-210ENST00000539394 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
KDM2B-210ENST00000539394 CHD1O14646 1710 aa20.46■□□□□ 0.87
KDM2B-210ENST00000539394 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
KDM2B-210ENST00000539394 NUP160Q12769 1436 aa20.43■□□□□ 0.86
KDM2B-210ENST00000539394 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
KDM2B-210ENST00000539394 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
KDM2B-210ENST00000539394 KIF21BO75037 1637 aa20.33■□□□□ 0.84
KDM2B-210ENST00000539394 KIAA0586Q9BVV6 1533 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms