RNA–Protein interactions for RNA: ENST00000421419.3

ATG2A-203, Transcript of autophagy related 2A, humanhuman

TSL 1 (best) BASIC

Gene ATG2A, Length 1,481 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2A-203ENST00000421419 NISCHQ9Y2I1 1504 aa42.35■■■■■ 4.37
ATG2A-203ENST00000421419 ABCC9O60706 1549 aa38.59■■■■□ 3.77
ATG2A-203ENST00000421419 CCDC180Q9P1Z9 1646 aa38.25■■■■□ 3.71
ATG2A-203ENST00000421419 RB1CC1Q8TDY2 1594 aa36.56■■■■□ 3.44
ATG2A-203ENST00000421419 DNAJC5BQ9UF47 199 aa36.53■■■■□ 3.44
ATG2A-203ENST00000421419 NACADO15069 1562 aa36.18■■■■□ 3.38
ATG2A-203ENST00000421419 UNC13AQ9UPW8 1703 aa35.87■■■■□ 3.33
ATG2A-203ENST00000421419 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
ATG2A-203ENST00000421419 PABPN1Q86U42 306 aaKnown RBP eCLIP35.82■■■■□ 3.322e-7■■■□□ 18.5
ATG2A-203ENST00000421419 BICRAQ9NZM4 1560 aa35.55■■■■□ 3.28
ATG2A-203ENST00000421419 MYO15BQ96JP2 1530 aa35.53■■■■□ 3.28
ATG2A-203ENST00000421419 ZCCHC6Q5VYS8 1495 aaKnown RBP35.04■■■■□ 3.2
ATG2A-203ENST00000421419 SHROOM4Q9ULL8 1493 aa34.95■■■■□ 3.18
ATG2A-203ENST00000421419 DCAF1Q9Y4B6 1507 aa34.94■■■■□ 3.18
ATG2A-203ENST00000421419 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
ATG2A-203ENST00000421419 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
ATG2A-203ENST00000421419 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
ATG2A-203ENST00000421419 EIF4G1Q04637 1599 aaKnown RBP34.69■■■■□ 3.14
ATG2A-203ENST00000421419 DNAJC5Q9H3Z4 198 aa33.79■■■■□ 3
ATG2A-203ENST00000421419 CUX2O14529 1486 aa33.41■■■□□ 2.94
ATG2A-203ENST00000421419 NCAPD3P42695 1498 aa33.38■■■□□ 2.93
ATG2A-203ENST00000421419 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
ATG2A-203ENST00000421419 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
ATG2A-203ENST00000421419 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
ATG2A-203ENST00000421419 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
ATG2A-203ENST00000421419 SMARCA2P51531 1590 aa33.14■■■□□ 2.9
ATG2A-203ENST00000421419 NESP48681 1621 aa33.06■■■□□ 2.88
ATG2A-203ENST00000421419 BAZ1BQ9UIG0 1483 aaKnown RBP32.91■■■□□ 2.86
ATG2A-203ENST00000421419 BAZ1AQ9NRL2 1556 aaPredicted RBP32.9■■■□□ 2.86
ATG2A-203ENST00000421419 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
ATG2A-203ENST00000421419 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
ATG2A-203ENST00000421419 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
ATG2A-203ENST00000421419 KIF21AQ7Z4S6 1674 aa32.7■■■□□ 2.82
ATG2A-203ENST00000421419 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
ATG2A-203ENST00000421419 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
ATG2A-203ENST00000421419 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
ATG2A-203ENST00000421419 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
ATG2A-203ENST00000421419 WIZO95785 1651 aa32.29■■■□□ 2.76
ATG2A-203ENST00000421419 WDR62O43379 1518 aa32.27■■■□□ 2.76
ATG2A-203ENST00000421419 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
ATG2A-203ENST00000421419 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
ATG2A-203ENST00000421419 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
ATG2A-203ENST00000421419 CFTRP13569 1480 aa31.91■■■□□ 2.7
ATG2A-203ENST00000421419 TOP2AP11388 1531 aaKnown RBP31.81■■■□□ 2.68
ATG2A-203ENST00000421419 URB2Q14146 1524 aaKnown RBP31.81■■■□□ 2.68
ATG2A-203ENST00000421419 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
ATG2A-203ENST00000421419 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
ATG2A-203ENST00000421419 PRDM2Q13029 1718 aa31.7■■■□□ 2.67
ATG2A-203ENST00000421419 RIMBP3CA6NJZ7 1639 aa31.52■■■□□ 2.64
ATG2A-203ENST00000421419 RIMBP3BA6NNM3 1639 aa31.52■■■□□ 2.64
ATG2A-203ENST00000421419 RIMBP3Q9UFD9 1639 aa31.52■■■□□ 2.64
ATG2A-203ENST00000421419 ZNF608Q9ULD9 1512 aaPredicted RBP31.47■■■□□ 2.63
ATG2A-203ENST00000421419 IFT140Q96RY7 1462 aa31.45■■■□□ 2.63
ATG2A-203ENST00000421419 CCDC88BA6NC98 1476 aa31.42■■■□□ 2.62
ATG2A-203ENST00000421419 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
ATG2A-203ENST00000421419 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
ATG2A-203ENST00000421419 EIF4G3O43432 1585 aaKnown RBP31.33■■■□□ 2.61
ATG2A-203ENST00000421419 DNMBPQ6XZF7 1577 aa31.24■■■□□ 2.59
ATG2A-203ENST00000421419 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
ATG2A-203ENST00000421419 CHD1O14646 1710 aa31.21■■■□□ 2.59
ATG2A-203ENST00000421419 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
ATG2A-203ENST00000421419 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.571e-6■■■■■ 30
ATG2A-203ENST00000421419 CYB5RLQ6IPT4 315 aa31.06■■■□□ 2.56
ATG2A-203ENST00000421419 POLA1P09884 1462 aaPredicted RBP31.03■■■□□ 2.56
ATG2A-203ENST00000421419 ARAP1Q96P48 1450 aa31■■■□□ 2.55
ATG2A-203ENST00000421419 FBLN2P98095 1184 aa30.95■■■□□ 2.54
ATG2A-203ENST00000421419 RAD54L2Q9Y4B4 1467 aa30.93■■■□□ 2.54
ATG2A-203ENST00000421419 TRHP20396 242 aaPredicted RBP30.85■■■□□ 2.53
ATG2A-203ENST00000421419 SOGA1O94964 1423 aa30.84■■■□□ 2.53
ATG2A-203ENST00000421419 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
ATG2A-203ENST00000421419 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
ATG2A-203ENST00000421419 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
ATG2A-203ENST00000421419 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
ATG2A-203ENST00000421419 CLASP1Q7Z460 1538 aa30.77■■■□□ 2.52
ATG2A-203ENST00000421419 CUX1P39880 1505 aa30.71■■■□□ 2.51
ATG2A-203ENST00000421419 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
ATG2A-203ENST00000421419 MAGI1Q96QZ7 1491 aaPredicted RBP30.68■■■□□ 2.5
ATG2A-203ENST00000421419 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
ATG2A-203ENST00000421419 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
ATG2A-203ENST00000421419 PBRM1Q86U86 1689 aa30.61■■■□□ 2.49
ATG2A-203ENST00000421419 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
ATG2A-203ENST00000421419 GAPVD1Q14C86 1478 aa30.48■■■□□ 2.47
ATG2A-203ENST00000421419 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.46
ATG2A-203ENST00000421419 ABCA10Q8WWZ4 1543 aa30.39■■■□□ 2.46
ATG2A-203ENST00000421419 ERCC6L2Q5T890 1561 aa30.29■■■□□ 2.44
ATG2A-203ENST00000421419 GRIN2AQ12879 1464 aa30.26■■■□□ 2.43
ATG2A-203ENST00000421419 ADAMTS12P58397 1594 aa30.24■■■□□ 2.43
ATG2A-203ENST00000421419 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
ATG2A-203ENST00000421419 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
ATG2A-203ENST00000421419 NUP160Q12769 1436 aa30.16■■■□□ 2.42
ATG2A-203ENST00000421419 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
ATG2A-203ENST00000421419 BIVM-ERCC5R4GMW8 1640 aa30.14■■■□□ 2.42
ATG2A-203ENST00000421419 SHROOM2Q13796 1616 aa30.13■■■□□ 2.41
ATG2A-203ENST00000421419 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
ATG2A-203ENST00000421419 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
ATG2A-203ENST00000421419 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
ATG2A-203ENST00000421419 KIF13AQ9H1H9 1805 aa30.01■■■□□ 2.39
ATG2A-203ENST00000421419 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.39
ATG2A-203ENST00000421419 PRG4Q92954 1404 aaPredicted RBP29.89■■■□□ 2.38
ATG2A-203ENST00000421419 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms