RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
UBASH3B-201ENST00000284273 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
UBASH3B-201ENST00000284273 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
UBASH3B-201ENST00000284273 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
UBASH3B-201ENST00000284273 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
UBASH3B-201ENST00000284273 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
UBASH3B-201ENST00000284273 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
UBASH3B-201ENST00000284273 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
UBASH3B-201ENST00000284273 APLP2Q06481 763 aa18.85■□□□□ 0.61
UBASH3B-201ENST00000284273 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
UBASH3B-201ENST00000284273 PCGF6Q9BYE7 350 aa18.41■□□□□ 0.54
UBASH3B-201ENST00000284273 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
UBASH3B-201ENST00000284273 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
UBASH3B-201ENST00000284273 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
UBASH3B-201ENST00000284273 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
UBASH3B-201ENST00000284273 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
UBASH3B-201ENST00000284273 CNGB1Q14028 1251 aaPredicted RBP18.12■□□□□ 0.49
UBASH3B-201ENST00000284273 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
UBASH3B-201ENST00000284273 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
UBASH3B-201ENST00000284273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
UBASH3B-201ENST00000284273 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
UBASH3B-201ENST00000284273 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
UBASH3B-201ENST00000284273 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.47
UBASH3B-201ENST00000284273 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
UBASH3B-201ENST00000284273 ITGAEP38570 1179 aa17.93■□□□□ 0.46
UBASH3B-201ENST00000284273 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
UBASH3B-201ENST00000284273 MYT1Q01538 1121 aa17.74■□□□□ 0.43
UBASH3B-201ENST00000284273 NEFLP07196 543 aa17.64■□□□□ 0.41
UBASH3B-201ENST00000284273 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
UBASH3B-201ENST00000284273 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
UBASH3B-201ENST00000284273 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
UBASH3B-201ENST00000284273 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
UBASH3B-201ENST00000284273 DAXXQ9UER7 740 aaPredicted RBP17.42■□□□□ 0.38
UBASH3B-201ENST00000284273 FBLN2P98095 1184 aa17.37■□□□□ 0.37
UBASH3B-201ENST00000284273 BCANQ96GW7 911 aa17.34■□□□□ 0.37
UBASH3B-201ENST00000284273 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
UBASH3B-201ENST00000284273 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
UBASH3B-201ENST00000284273 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
UBASH3B-201ENST00000284273 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
UBASH3B-201ENST00000284273 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
UBASH3B-201ENST00000284273 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
UBASH3B-201ENST00000284273 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
UBASH3B-201ENST00000284273 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
UBASH3B-201ENST00000284273 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
UBASH3B-201ENST00000284273 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
UBASH3B-201ENST00000284273 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
UBASH3B-201ENST00000284273 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
UBASH3B-201ENST00000284273 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
UBASH3B-201ENST00000284273 ABCC9O60706 1549 aa16.9■□□□□ 0.3
UBASH3B-201ENST00000284273 A0A0G2JS52 829 aa16.89■□□□□ 0.29
UBASH3B-201ENST00000284273 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
UBASH3B-201ENST00000284273 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
UBASH3B-201ENST00000284273 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
UBASH3B-201ENST00000284273 ZBTB47Q9UFB7 747 aaPredicted RBP16.84■□□□□ 0.29
UBASH3B-201ENST00000284273 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
UBASH3B-201ENST00000284273 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
UBASH3B-201ENST00000284273 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
UBASH3B-201ENST00000284273 HRCP23327 699 aa16.78■□□□□ 0.28
UBASH3B-201ENST00000284273 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
UBASH3B-201ENST00000284273 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
UBASH3B-201ENST00000284273 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
UBASH3B-201ENST00000284273 NEFMP07197 916 aa16.63■□□□□ 0.25
UBASH3B-201ENST00000284273 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
UBASH3B-201ENST00000284273 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
UBASH3B-201ENST00000284273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBASH3B-201ENST00000284273 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
UBASH3B-201ENST00000284273 ANP32CO43423 234 aa16.49■□□□□ 0.23
UBASH3B-201ENST00000284273 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
UBASH3B-201ENST00000284273 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
UBASH3B-201ENST00000284273 TULP1O00294 542 aaPredicted RBP16.4■□□□□ 0.22
UBASH3B-201ENST00000284273 ARXQ96QS3 562 aa16.38■□□□□ 0.21
UBASH3B-201ENST00000284273 CHIC2Q9UKJ5 165 aa16.34■□□□□ 0.21
UBASH3B-201ENST00000284273 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
UBASH3B-201ENST00000284273 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
UBASH3B-201ENST00000284273 KDM2AQ9Y2K7 1162 aa16.31■□□□□ 0.2
UBASH3B-201ENST00000284273 ARID4BQ4LE39 1312 aaPredicted RBP16.3■□□□□ 0.2
UBASH3B-201ENST00000284273 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.19
UBASH3B-201ENST00000284273 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.19
UBASH3B-201ENST00000284273 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
UBASH3B-201ENST00000284273 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
UBASH3B-201ENST00000284273 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
UBASH3B-201ENST00000284273 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
UBASH3B-201ENST00000284273 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
UBASH3B-201ENST00000284273 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
UBASH3B-201ENST00000284273 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
UBASH3B-201ENST00000284273 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
UBASH3B-201ENST00000284273 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
UBASH3B-201ENST00000284273 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
UBASH3B-201ENST00000284273 NPHP1O15259 732 aa16.1■□□□□ 0.17
UBASH3B-201ENST00000284273 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
UBASH3B-201ENST00000284273 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
UBASH3B-201ENST00000284273 TMC1Q8TDI8 760 aa16.06■□□□□ 0.16
UBASH3B-201ENST00000284273 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
UBASH3B-201ENST00000284273 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
UBASH3B-201ENST00000284273 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
UBASH3B-201ENST00000284273 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBASH3B-201ENST00000284273 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
UBASH3B-201ENST00000284273 RGL3Q3MIN7 710 aa16■□□□□ 0.15
UBASH3B-201ENST00000284273 FKBP8Q14318 412 aa15.99■□□□□ 0.15
UBASH3B-201ENST00000284273 CDK11BP21127 795 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms