RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
CSGALNACT1-213ENST00000523262 ABCC9O60706 1549 aa35.97■■■■□ 3.35
CSGALNACT1-213ENST00000523262 CCDC180Q9P1Z9 1646 aa35.75■■■■□ 3.31
CSGALNACT1-213ENST00000523262 RB1CC1Q8TDY2 1594 aa34.16■■■■□ 3.06
CSGALNACT1-213ENST00000523262 NACADO15069 1562 aa33.89■■■■□ 3.02
CSGALNACT1-213ENST00000523262 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
CSGALNACT1-213ENST00000523262 DCAF8L2P0C7V8 631 aa33.83■■■■□ 3.01
CSGALNACT1-213ENST00000523262 PABPN1Q86U42 306 aaKnown RBP eCLIP33.5■■■□□ 2.95
CSGALNACT1-213ENST00000523262 MYO15BQ96JP2 1530 aa33.35■■■□□ 2.93
CSGALNACT1-213ENST00000523262 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
CSGALNACT1-213ENST00000523262 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
CSGALNACT1-213ENST00000523262 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
CSGALNACT1-213ENST00000523262 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
CSGALNACT1-213ENST00000523262 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
CSGALNACT1-213ENST00000523262 SCRIBQ14160 1630 aa32.6■■■□□ 2.81
CSGALNACT1-213ENST00000523262 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
CSGALNACT1-213ENST00000523262 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
CSGALNACT1-213ENST00000523262 EIF4G1Q04637 1599 aaKnown RBP32.34■■■□□ 2.77
CSGALNACT1-213ENST00000523262 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
CSGALNACT1-213ENST00000523262 DNAJC5Q9H3Z4 198 aa31.25■■■□□ 2.59
CSGALNACT1-213ENST00000523262 ATAD2BQ9ULI0 1458 aa31.16■■■□□ 2.58
CSGALNACT1-213ENST00000523262 ERCC6Q03468 1493 aa31.13■■■□□ 2.57
CSGALNACT1-213ENST00000523262 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
CSGALNACT1-213ENST00000523262 CUX2O14529 1486 aa31.08■■■□□ 2.57
CSGALNACT1-213ENST00000523262 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
CSGALNACT1-213ENST00000523262 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
CSGALNACT1-213ENST00000523262 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
CSGALNACT1-213ENST00000523262 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.54
CSGALNACT1-213ENST00000523262 NESP48681 1621 aa30.82■■■□□ 2.52
CSGALNACT1-213ENST00000523262 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
CSGALNACT1-213ENST00000523262 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
CSGALNACT1-213ENST00000523262 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
CSGALNACT1-213ENST00000523262 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
CSGALNACT1-213ENST00000523262 PDS5BQ9NTI5 1447 aa30.49■■■□□ 2.47
CSGALNACT1-213ENST00000523262 KIF21AQ7Z4S6 1674 aa30.37■■■□□ 2.45
CSGALNACT1-213ENST00000523262 CADPSQ9ULU8 1353 aa30.37■■■□□ 2.45
CSGALNACT1-213ENST00000523262 WIZO95785 1651 aa30.27■■■□□ 2.44
CSGALNACT1-213ENST00000523262 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
CSGALNACT1-213ENST00000523262 WDR62O43379 1518 aa30.09■■■□□ 2.41
CSGALNACT1-213ENST00000523262 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
CSGALNACT1-213ENST00000523262 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
CSGALNACT1-213ENST00000523262 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
CSGALNACT1-213ENST00000523262 CFTRP13569 1480 aa29.95■■■□□ 2.39
CSGALNACT1-213ENST00000523262 TOP2AP11388 1531 aaKnown RBP29.91■■■□□ 2.38
CSGALNACT1-213ENST00000523262 TRIM41Q8WV44 630 aa29.87■■■□□ 2.37
CSGALNACT1-213ENST00000523262 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
CSGALNACT1-213ENST00000523262 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
CSGALNACT1-213ENST00000523262 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
CSGALNACT1-213ENST00000523262 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
CSGALNACT1-213ENST00000523262 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
CSGALNACT1-213ENST00000523262 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
CSGALNACT1-213ENST00000523262 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
CSGALNACT1-213ENST00000523262 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
CSGALNACT1-213ENST00000523262 DNMBPQ6XZF7 1577 aa29.27■■■□□ 2.28
CSGALNACT1-213ENST00000523262 RIMBP3CA6NJZ7 1639 aa29.21■■■□□ 2.27
CSGALNACT1-213ENST00000523262 RIMBP3BA6NNM3 1639 aa29.21■■■□□ 2.27
CSGALNACT1-213ENST00000523262 RIMBP3Q9UFD9 1639 aa29.21■■■□□ 2.27
CSGALNACT1-213ENST00000523262 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
CSGALNACT1-213ENST00000523262 AQRO60306 1485 aaKnown RBP eCLIP29.14■■■□□ 2.26
CSGALNACT1-213ENST00000523262 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
CSGALNACT1-213ENST00000523262 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
CSGALNACT1-213ENST00000523262 POLA1P09884 1462 aaPredicted RBP29.09■■■□□ 2.25
CSGALNACT1-213ENST00000523262 FBLN2P98095 1184 aa29.08■■■□□ 2.25
CSGALNACT1-213ENST00000523262 CYB5RLQ6IPT4 315 aa29.01■■■□□ 2.23
CSGALNACT1-213ENST00000523262 SOGA1O94964 1423 aa29.01■■■□□ 2.23
CSGALNACT1-213ENST00000523262 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
CSGALNACT1-213ENST00000523262 CHD1O14646 1710 aa28.99■■■□□ 2.23
CSGALNACT1-213ENST00000523262 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
CSGALNACT1-213ENST00000523262 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
CSGALNACT1-213ENST00000523262 CHMP7Q8WUX9 453 aaPredicted RBP28.84■■■□□ 2.21
CSGALNACT1-213ENST00000523262 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
CSGALNACT1-213ENST00000523262 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
CSGALNACT1-213ENST00000523262 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
CSGALNACT1-213ENST00000523262 CUX1P39880 1505 aa28.81■■■□□ 2.2
CSGALNACT1-213ENST00000523262 TRHP20396 242 aaPredicted RBP28.78■■■□□ 2.2
CSGALNACT1-213ENST00000523262 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
CSGALNACT1-213ENST00000523262 GRIN2BQ13224 1484 aa28.76■■■□□ 2.19
CSGALNACT1-213ENST00000523262 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
CSGALNACT1-213ENST00000523262 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
CSGALNACT1-213ENST00000523262 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
CSGALNACT1-213ENST00000523262 CLASP1Q7Z460 1538 aa28.67■■■□□ 2.18
CSGALNACT1-213ENST00000523262 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
CSGALNACT1-213ENST00000523262 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
CSGALNACT1-213ENST00000523262 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
CSGALNACT1-213ENST00000523262 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
CSGALNACT1-213ENST00000523262 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
CSGALNACT1-213ENST00000523262 GRIN2AQ12879 1464 aa28.36■■■□□ 2.13
CSGALNACT1-213ENST00000523262 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
CSGALNACT1-213ENST00000523262 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
CSGALNACT1-213ENST00000523262 ADAMTS12P58397 1594 aa28.29■■■□□ 2.12
CSGALNACT1-213ENST00000523262 FHAD1B1AJZ9 1412 aa28.27■■■□□ 2.12
CSGALNACT1-213ENST00000523262 NUP160Q12769 1436 aa28.26■■■□□ 2.12
CSGALNACT1-213ENST00000523262 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
CSGALNACT1-213ENST00000523262 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.11
CSGALNACT1-213ENST00000523262 ERICH3Q5RHP9 1530 aa28.2■■■□□ 2.1
CSGALNACT1-213ENST00000523262 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
CSGALNACT1-213ENST00000523262 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
CSGALNACT1-213ENST00000523262 PRG4Q92954 1404 aaPredicted RBP28.05■■■□□ 2.08
CSGALNACT1-213ENST00000523262 JPH4Q96JJ6 628 aa28.05■■■□□ 2.08
CSGALNACT1-213ENST00000523262 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms