Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 USB1-208ENST00000563207 464 ntTSL 513.33□□□□□ -0.285e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-214ENST00000568848 548 ntTSL 413.31□□□□□ -0.285e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-215ENST00000569252 573 ntTSL 413.31□□□□□ -0.285e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.1□□□□□ -0.315e-11■■□□□ 11.9
PRPF8Q6P2Q9 USB1-207ENST00000563149 1751 ntTSL 2 BASIC9.51□□□□□ -0.895e-11■■□□□ 11.9
PRPF8Q6P2Q9 PTAR1-206ENST00000474925 616 ntTSL 23.93□□□□□ -1.785e-11■■□□□ 11.9
PRPF8Q6P2Q9 PACSIN2-209ENST00000453079 505 ntTSL 23.59□□□□□ -1.835e-11■■□□□ 11.9
PRPF8Q6P2Q9 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.83□□□□□ -0.683e-8■■□□□ 11.9
PRPF8Q6P2Q9 MLXIP-210ENST00000541750 2835 ntTSL 510.08□□□□□ -0.88e-11■■□□□ 11.9
PRPF8Q6P2Q9 CYFIP1-205ENST00000612288 553 ntTSL 39.2□□□□□ -0.946e-7■■□□□ 11.9
PRPF8Q6P2Q9 PLCB3-203ENST00000536243 471 ntTSL 27.53□□□□□ -1.23e-6■■□□□ 11.9
PRPF8Q6P2Q9 DEF8-212ENST00000563805 992 ntTSL 313.31□□□□□ -0.282e-7■■□□□ 11.9
PRPF8Q6P2Q9 FGFR1-232ENST00000527745 790 ntTSL 36.18□□□□□ -1.422e-6■■□□□ 11.9
PRPF8Q6P2Q9 ZC3H4-205ENST00000601973 4895 ntAPPRIS ALT2 TSL 512.02□□□□□ -0.491e-6■■□□□ 11.9
PRPF8Q6P2Q9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-9■■□□□ 11.9
PRPF8Q6P2Q9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.532e-9■■□□□ 11.9
PRPF8Q6P2Q9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.582e-9■■□□□ 11.9
PRPF8Q6P2Q9 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.612e-9■■□□□ 11.9
PRPF8Q6P2Q9 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.952e-9■■□□□ 11.9
PRPF8Q6P2Q9 AGPAT1-208ENST00000490711 2448 ntTSL 27.23□□□□□ -1.252e-9■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.142e-7■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-206ENST00000503782 1854 ntTSL 221.29■■□□□ 12e-7■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.962e-7■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.85■□□□□ 0.772e-7■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-204ENST00000502529 440 ntTSL 317.26■□□□□ 0.352e-7■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.51□□□□□ -0.092e-7■■□□□ 11.9
PRPF8Q6P2Q9 MXD3-209ENST00000513169 555 ntTSL 514.31□□□□□ -0.122e-7■■□□□ 11.9
PRPF8Q6P2Q9 LASP1-207ENST00000581485 617 ntTSL 314.04□□□□□ -0.163e-6■■□□□ 11.9
PRPF8Q6P2Q9 C9orf3-207ENST00000445181 873 ntTSL 320.15■□□□□ 0.821e-7■■□□□ 11.9
PRPF8Q6P2Q9 C9orf3-215ENST00000478473 895 ntTSL 320.06■□□□□ 0.81e-7■■□□□ 11.9
PRPF8Q6P2Q9 C9orf3-213ENST00000471978 478 ntTSL 219.41■□□□□ 0.71e-7■■□□□ 11.9
PRPF8Q6P2Q9 C9orf3-211ENST00000463372 919 ntTSL 312.91□□□□□ -0.341e-7■■□□□ 11.9
PRPF8Q6P2Q9 NUBP2-202ENST00000562263 811 ntTSL 315.42■□□□□ 0.062e-6■■□□□ 11.9
PRPF8Q6P2Q9 SNAP29-203ENST00000490458 972 ntTSL 214.44□□□□□ -0.16e-10■■□□□ 11.9
PRPF8Q6P2Q9 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.466e-10■■□□□ 11.9
PRPF8Q6P2Q9 SNAP29-202ENST00000439214 681 ntTSL 34.37□□□□□ -1.716e-10■■□□□ 11.9
PRPF8Q6P2Q9 MYB-240ENST00000534736 801 ntTSL 1 (best)3.6□□□□□ -1.837e-7■■□□□ 11.9
PRPF8Q6P2Q9 ARRDC1-205ENST00000466367 866 ntTSL 1 (best)18.46■□□□□ 0.554e-8■■□□□ 11.9
PRPF8Q6P2Q9 ARRDC1-207ENST00000471125 612 ntTSL 317.75■□□□□ 0.434e-8■■□□□ 11.9
PRPF8Q6P2Q9 ARRDC1-211ENST00000495220 747 ntTSL 216.74■□□□□ 0.274e-8■■□□□ 11.9
PRPF8Q6P2Q9 ARRDC1-203ENST00000431925 555 ntTSL 315.73■□□□□ 0.114e-8■■□□□ 11.9
PRPF8Q6P2Q9 ARRDC1-209ENST00000483563 704 ntTSL 315.68■□□□□ 0.14e-8■■□□□ 11.9
PRPF8Q6P2Q9 PRR5-208ENST00000455389 1431 ntTSL 314.57□□□□□ -0.084e-14■■□□□ 11.9
PRPF8Q6P2Q9 PRR5-215ENST00000495017 2125 ntTSL 1 (best)12.3□□□□□ -0.444e-14■■□□□ 11.9
PRPF8Q6P2Q9 CUL4A-211ENST00000498562 790 ntTSL 322.42■■□□□ 1.182e-10■■□□□ 11.9
PRPF8Q6P2Q9 CUL4A-205ENST00000463426 893 ntTSL 321.9■■□□□ 1.12e-10■■□□□ 11.9
PRPF8Q6P2Q9 CAMK1-205ENST00000482803 587 ntTSL 214.92□□□□□ -0.022e-6■■□□□ 11.9
PRPF8Q6P2Q9 CAMK1-204ENST00000421120 950 ntTSL 214.55□□□□□ -0.082e-6■■□□□ 11.9
PRPF8Q6P2Q9 CAMK1-206ENST00000496534 1487 ntTSL 214.06□□□□□ -0.162e-6■■□□□ 11.9
PRPF8Q6P2Q9 PLLP-202ENST00000564018 449 ntTSL 513.74□□□□□ -0.211e-10■■□□□ 11.9
PRPF8Q6P2Q9 GTF2I-219ENST00000621040 3437 ntTSL 27.51□□□□□ -1.211e-10■■□□□ 11.9
PRPF8Q6P2Q9 GTF2I-214ENST00000614048 2844 ntTSL 27.14□□□□□ -1.271e-10■■□□□ 11.9
PRPF8Q6P2Q9 TAB3-201ENST00000288422 805 ntTSL 519.82■□□□□ 0.768e-7■■□□□ 11.9
PRPF8Q6P2Q9 PLXNB3-202ENST00000411613 774 ntTSL 513.89□□□□□ -0.191e-6■■□□□ 11.9
PRPF8Q6P2Q9 DNAJC11-209ENST00000472414 725 ntTSL 312.29□□□□□ -0.443e-6■■□□□ 11.9
PRPF8Q6P2Q9 HMGCS1-203ENST00000507004 950 ntTSL 212.44□□□□□ -0.427e-9■■□□□ 11.9
PRPF8Q6P2Q9 RSF1-202ENST00000440064 604 ntTSL 517.78■□□□□ 0.442e-6■■□□□ 11.9
PRPF8Q6P2Q9 RSF1-208ENST00000530604 520 ntTSL 215.27■□□□□ 0.032e-6■■□□□ 11.9
PRPF8Q6P2Q9 RSF1-206ENST00000528095 2107 ntTSL 1 (best)14.9□□□□□ -0.022e-6■■□□□ 11.9
PRPF8Q6P2Q9 RSF1-203ENST00000467567 2982 ntTSL 211.35□□□□□ -0.592e-6■■□□□ 11.9
PRPF8Q6P2Q9 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.232e-6■■□□□ 11.9
PRPF8Q6P2Q9 ALDH1B1-202ENST00000635162 584 ntTSL 314.77□□□□□ -0.041e-8■■□□□ 11.9
PRPF8Q6P2Q9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-8■■□□□ 11.9
PRPF8Q6P2Q9 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.863e-8■■□□□ 11.9
PRPF8Q6P2Q9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.041e-7■■□□□ 11.8
PRPF8Q6P2Q9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.081e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-203ENST00000446777 560 ntTSL 520.77■□□□□ 0.923e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.773e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-205ENST00000471524 879 ntTSL 316.91■□□□□ 0.33e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-207ENST00000494177 532 ntTSL 416.35■□□□□ 0.213e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.95□□□□□ -0.023e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.573e-7■■□□□ 11.8
PRPF8Q6P2Q9 TRAPPC12-219ENST00000479955 420 ntTSL 39.6□□□□□ -0.874e-6■■□□□ 11.8
PRPF8Q6P2Q9 MED22-210ENST00000614493 3886 ntAPPRIS ALT1 TSL 2 BASIC9.26□□□□□ -0.933e-7■■□□□ 11.8
PRPF8Q6P2Q9 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC8.82□□□□□ -13e-7■■□□□ 11.8
PRPF8Q6P2Q9 MATR3-217ENST00000511333 558 ntTSL 50.95□□□□□ -2.261e-9■■□□□ 11.8
PRPF8Q6P2Q9 GRAMD1A-205ENST00000595596 881 ntTSL 216.64■□□□□ 0.252e-8■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-209ENST00000477554 1432 ntAPPRIS ALT2 TSL 214.96□□□□□ -0.013e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-212ENST00000480836 1189 ntTSL 211.52□□□□□ -0.573e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-218ENST00000496197 1463 ntTSL 211.14□□□□□ -0.633e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-210ENST00000477625 673 ntTSL 510.4□□□□□ -0.743e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-217ENST00000495688 2689 ntTSL 1 (best)9.95□□□□□ -0.823e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-204ENST00000462815 1147 ntTSL 29.81□□□□□ -0.843e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.893e-6■■□□□ 11.8
PRPF8Q6P2Q9 PTPN7-201ENST00000309017 3765 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.013e-6■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-225ENST00000552153 549 ntTSL 415.27■□□□□ 0.036e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-206ENST00000547675 581 ntTSL 515.11■□□□□ 0.016e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-214ENST00000550137 529 ntTSL 415.11■□□□□ 0.016e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-203ENST00000457164 1081 ntTSL 215.11■□□□□ 0.016e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-210ENST00000549296 560 ntTSL 514.52□□□□□ -0.086e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-205ENST00000547670 1866 ntTSL 1 (best)14.48□□□□□ -0.096e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.25□□□□□ -0.296e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-202ENST00000417750 2334 ntTSL 211.82□□□□□ -0.526e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-216ENST00000550867 2800 ntTSL 1 (best)10.88□□□□□ -0.676e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-230ENST00000553204 582 ntTSL 310.16□□□□□ -0.786e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.796e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-223ENST00000551854 535 ntTSL 49.15□□□□□ -0.956e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-219ENST00000551169 771 ntTSL 57.87□□□□□ -1.156e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-222ENST00000551782 567 ntTSL 47.74□□□□□ -1.176e-8■■□□□ 11.8
PRPF8Q6P2Q9 LMBR1L-215ENST00000550815 541 ntTSL 44.71□□□□□ -1.666e-8■■□□□ 11.8
Retrieved 100 of 73,762 protein–RNA pairs in 1071.2 ms