RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-205ENST00000463426 NISCHQ9Y2I1 1504 aa62.4■■■■■ 7.58
CUL4A-205ENST00000463426 CCDC180Q9P1Z9 1646 aa55.41■■■■■ 6.46
CUL4A-205ENST00000463426 ABCC9O60706 1549 aa53.3■■■■■ 6.12
CUL4A-205ENST00000463426 ZCCHC6Q5VYS8 1495 aaKnown RBP52.12■■■■■ 5.93
CUL4A-205ENST00000463426 NACADO15069 1562 aa51.9■■■■■ 5.9
CUL4A-205ENST00000463426 MYO15BQ96JP2 1530 aa51.86■■■■■ 5.89
CUL4A-205ENST00000463426 DCAF1Q9Y4B6 1507 aa51.83■■■■■ 5.89
CUL4A-205ENST00000463426 RB1CC1Q8TDY2 1594 aa51.79■■■■■ 5.88
CUL4A-205ENST00000463426 DCAF8L2P0C7V8 631 aa51.63■■■■■ 5.86
CUL4A-205ENST00000463426 UNC13AQ9UPW8 1703 aa50.57■■■■■ 5.69
CUL4A-205ENST00000463426 SCRIBQ14160 1630 aa50.35■■■■■ 5.65
CUL4A-205ENST00000463426 BICRAQ9NZM4 1560 aa50.06■■■■■ 5.6
CUL4A-205ENST00000463426 SHROOM4Q9ULL8 1493 aa49.89■■■■■ 5.58
CUL4A-205ENST00000463426 PABPN1Q86U42 306 aaKnown RBP eCLIP49.79■■■■■ 5.56
CUL4A-205ENST00000463426 EIF4G1Q04637 1599 aaKnown RBP48.73■■■■■ 5.39
CUL4A-205ENST00000463426 BAZ1AQ9NRL2 1556 aaPredicted RBP48.41■■■■■ 5.34
CUL4A-205ENST00000463426 CECR2Q9BXF3 1484 aa48.37■■■■■ 5.33
CUL4A-205ENST00000463426 CC2D2AQ9P2K1 1620 aa48.36■■■■■ 5.33
CUL4A-205ENST00000463426 SMARCA4P51532 1647 aa48.32■■■■■ 5.33
CUL4A-205ENST00000463426 DNAJC5BQ9UF47 199 aa48.2■■■■■ 5.31
CUL4A-205ENST00000463426 MROH2BQ7Z745 1585 aa48■■■■■ 5.27
CUL4A-205ENST00000463426 SMARCA2P51531 1590 aa47.96■■■■■ 5.27
CUL4A-205ENST00000463426 PEG3Q9GZU2 1588 aa47.92■■■■■ 5.26
CUL4A-205ENST00000463426 ATAD2BQ9ULI0 1458 aa47.85■■■■■ 5.25
CUL4A-205ENST00000463426 NCAPD3P42695 1498 aa47.79■■■■■ 5.24
CUL4A-205ENST00000463426 HMGXB3Q12766 1538 aa47.7■■■■■ 5.23
CUL4A-205ENST00000463426 RSF1Q96T23 1441 aaPredicted RBP47.68■■■■■ 5.22
CUL4A-205ENST00000463426 WIZO95785 1651 aa47.54■■■■■ 5.2
CUL4A-205ENST00000463426 BAZ1BQ9UIG0 1483 aaKnown RBP47.53■■■■■ 5.2
CUL4A-205ENST00000463426 TOP2AP11388 1531 aaKnown RBP47.18■■■■■ 5.14
CUL4A-205ENST00000463426 SUPT5HO00267 1087 aaKnown RBP46.75■■■■■ 5.07
CUL4A-205ENST00000463426 LAMC3Q9Y6N6 1575 aa46.52■■■■■ 5.04
CUL4A-205ENST00000463426 CCDC88BA6NC98 1476 aa46.51■■■■■ 5.04
CUL4A-205ENST00000463426 CADPSQ9ULU8 1353 aa46.39■■■■■ 5.02
CUL4A-205ENST00000463426 CFTRP13569 1480 aa46.27■■■■■ 5
CUL4A-205ENST00000463426 NESP48681 1621 aa46.27■■■■■ 5
CUL4A-205ENST00000463426 PRDM2Q13029 1718 aa46.17■■■■■ 4.98
CUL4A-205ENST00000463426 PDS5BQ9NTI5 1447 aa46.14■■■■■ 4.98
CUL4A-205ENST00000463426 ERCC6Q03468 1493 aa46.01■■■■■ 4.96
CUL4A-205ENST00000463426 KIF21AQ7Z4S6 1674 aa45.91■■■■■ 4.94
CUL4A-205ENST00000463426 FANCD2Q9BXW9 1451 aa45.85■■■■■ 4.93
CUL4A-205ENST00000463426 CEP164Q9UPV0 1460 aa45.79■■■■■ 4.92
CUL4A-205ENST00000463426 THOC2Q8NI27 1593 aaKnown RBP45.62■■■■■ 4.89
CUL4A-205ENST00000463426 MRC2Q9UBG0 1479 aa45.59■■■■■ 4.89
CUL4A-205ENST00000463426 WDR62O43379 1518 aa45.45■■■■■ 4.87
CUL4A-205ENST00000463426 CUX2O14529 1486 aa45.43■■■■■ 4.86
CUL4A-205ENST00000463426 ABCC8Q09428 1581 aa45.4■■■■■ 4.86
CUL4A-205ENST00000463426 URB2Q14146 1524 aaKnown RBP45.31■■■■■ 4.84
CUL4A-205ENST00000463426 DNMBPQ6XZF7 1577 aa45.26■■■■■ 4.84
CUL4A-205ENST00000463426 TOPBP1Q92547 1522 aa45.19■■■■■ 4.82
CUL4A-205ENST00000463426 CUX1P39880 1505 aa45.03■■■■■ 4.8
CUL4A-205ENST00000463426 WRNQ14191 1432 aaPredicted RBP eCLIP45.01■■■■■ 4.8
CUL4A-205ENST00000463426 BIVM-ERCC5R4GMW8 1640 aa44.93■■■■■ 4.78
CUL4A-205ENST00000463426 TOP2BQ02880 1626 aa44.9■■■■■ 4.78
CUL4A-205ENST00000463426 POLA1P09884 1462 aaPredicted RBP44.83■■■■■ 4.77
CUL4A-205ENST00000463426 IFT140Q96RY7 1462 aa44.82■■■■■ 4.77
CUL4A-205ENST00000463426 SYNJ1O43426 1573 aa44.81■■■■■ 4.76
CUL4A-205ENST00000463426 FGD5Q6ZNL6 1462 aa44.79■■■■■ 4.76
CUL4A-205ENST00000463426 TARBP1Q13395 1621 aaKnown RBP44.68■■■■■ 4.74
CUL4A-205ENST00000463426 SOGA1O94964 1423 aa44.64■■■■■ 4.74
CUL4A-205ENST00000463426 WDR97A6NE52 1622 aa44.59■■■■■ 4.73
CUL4A-205ENST00000463426 RAD54L2Q9Y4B4 1467 aa44.52■■■■■ 4.72
CUL4A-205ENST00000463426 ABCA10Q8WWZ4 1543 aa44.48■■■■■ 4.71
CUL4A-205ENST00000463426 ZNF608Q9ULD9 1512 aaPredicted RBP44.39■■■■■ 4.7
CUL4A-205ENST00000463426 EIF4G3O43432 1585 aaKnown RBP44.39■■■■■ 4.7
CUL4A-205ENST00000463426 TRIM41Q8WV44 630 aa44.27■■■■■ 4.68
CUL4A-205ENST00000463426 ABCA5Q8WWZ7 1642 aa44.25■■■■■ 4.67
CUL4A-205ENST00000463426 TDRD9Q8NDG6 1382 aaKnown RBP44.21■■■■■ 4.67
CUL4A-205ENST00000463426 AQRO60306 1485 aaKnown RBP eCLIP44.21■■■■■ 4.675e-8■■■□□ 17.4
CUL4A-205ENST00000463426 GAPVD1Q14C86 1478 aa44.18■■■■■ 4.66
CUL4A-205ENST00000463426 GRIN2BQ13224 1484 aa44.13■■■■■ 4.65
CUL4A-205ENST00000463426 PBRM1Q86U86 1689 aa44.13■■■■■ 4.65
CUL4A-205ENST00000463426 KIF27Q86VH2 1401 aa44.07■■■■■ 4.64
CUL4A-205ENST00000463426 CHIC1Q5VXU3 224 aa44.04■■■■■ 4.64
CUL4A-205ENST00000463426 MAGI1Q96QZ7 1491 aaPredicted RBP44.01■■■■■ 4.64
CUL4A-205ENST00000463426 ERICH3Q5RHP9 1530 aa44■■■■■ 4.63
CUL4A-205ENST00000463426 SNAPC4Q5SXM2 1469 aa43.9■■■■■ 4.62
CUL4A-205ENST00000463426 ADAMTS12P58397 1594 aa43.78■■■■■ 4.6
CUL4A-205ENST00000463426 SYNJ2O15056 1496 aa43.77■■■■■ 4.6
CUL4A-205ENST00000463426 CUL7Q14999 1698 aa43.77■■■■■ 4.6
CUL4A-205ENST00000463426 CHD1O14646 1710 aa43.73■■■■■ 4.59
CUL4A-205ENST00000463426 FHAD1B1AJZ9 1412 aa43.73■■■■■ 4.59
CUL4A-205ENST00000463426 EEA1Q15075 1411 aa43.73■■■■■ 4.59
CUL4A-205ENST00000463426 IGF1RP08069 1367 aa43.7■■■■■ 4.59
CUL4A-205ENST00000463426 CHMP7Q8WUX9 453 aaPredicted RBP43.61■■■■■ 4.57
CUL4A-205ENST00000463426 RUSC2Q8N2Y8 1516 aa43.6■■■■■ 4.57
CUL4A-205ENST00000463426 DNAJC5Q9H3Z4 198 aa43.6■■■■■ 4.57
CUL4A-205ENST00000463426 GRIN2AQ12879 1464 aa43.53■■■■■ 4.56
CUL4A-205ENST00000463426 FBLN2P98095 1184 aa43.53■■■■■ 4.56
CUL4A-205ENST00000463426 OSCARQ8IYS5 282 aa43.52■■■■■ 4.56
CUL4A-205ENST00000463426 CARMIL1Q5VZK9 1371 aa43.5■■■■■ 4.55
CUL4A-205ENST00000463426 CSRNP3Q8WYN3 585 aa43.37■■■■■ 4.53
CUL4A-205ENST00000463426 RAPGEF2Q9Y4G8 1499 aa43.36■■■■■ 4.53
CUL4A-205ENST00000463426 NUP160Q12769 1436 aa43.33■■■■■ 4.53
CUL4A-205ENST00000463426 PRXQ9BXM0 1461 aa43.32■■■■■ 4.53
CUL4A-205ENST00000463426 CLASP1Q7Z460 1538 aa43.26■■■■■ 4.52
CUL4A-205ENST00000463426 CEP170Q5SW79 1584 aa43.24■■■■■ 4.51
CUL4A-205ENST00000463426 KIF21BO75037 1637 aa43.17■■■■■ 4.5
CUL4A-205ENST00000463426 FAM9AQ8IZU1 332 aaPredicted RBP43.14■■■■■ 4.5
CUL4A-205ENST00000463426 KIAA0586Q9BVV6 1533 aa43.08■■■■■ 4.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms