RNA–Protein interactions for RNA: ENST00000483563.5

ARRDC1-209, Transcript of arrestin domain containing 1, humanhuman

TSL 3

Gene ARRDC1, Length 704 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-209ENST00000483563 NISCHQ9Y2I1 1504 aa44.85■■■■■ 4.77
ARRDC1-209ENST00000483563 ABCC9O60706 1549 aa40.69■■■■■ 4.1
ARRDC1-209ENST00000483563 CCDC180Q9P1Z9 1646 aa40.37■■■■■ 4.05
ARRDC1-209ENST00000483563 RB1CC1Q8TDY2 1594 aa38.64■■■■□ 3.78
ARRDC1-209ENST00000483563 DNAJC5BQ9UF47 199 aa38.46■■■■□ 3.75
ARRDC1-209ENST00000483563 NACADO15069 1562 aa38.24■■■■□ 3.71
ARRDC1-209ENST00000483563 DCAF8L2P0C7V8 631 aa37.82■■■■□ 3.64
ARRDC1-209ENST00000483563 PABPN1Q86U42 306 aaKnown RBP eCLIP37.74■■■■□ 3.63
ARRDC1-209ENST00000483563 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
ARRDC1-209ENST00000483563 MYO15BQ96JP2 1530 aa37.56■■■■□ 3.6
ARRDC1-209ENST00000483563 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
ARRDC1-209ENST00000483563 ZCCHC6Q5VYS8 1495 aaKnown RBP37.27■■■■□ 3.56
ARRDC1-209ENST00000483563 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
ARRDC1-209ENST00000483563 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
ARRDC1-209ENST00000483563 CC2D2AQ9P2K1 1620 aa36.78■■■■□ 3.48
ARRDC1-209ENST00000483563 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
ARRDC1-209ENST00000483563 SCRIBQ14160 1630 aa36.67■■■■□ 3.46
ARRDC1-209ENST00000483563 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
ARRDC1-209ENST00000483563 DNAJC5Q9H3Z4 198 aa35.78■■■■□ 3.32
ARRDC1-209ENST00000483563 CUX2O14529 1486 aa35.37■■■■□ 3.25
ARRDC1-209ENST00000483563 ERCC6Q03468 1493 aa35.26■■■■□ 3.23
ARRDC1-209ENST00000483563 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
ARRDC1-209ENST00000483563 ATAD2BQ9ULI0 1458 aa35.05■■■■□ 3.2
ARRDC1-209ENST00000483563 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
ARRDC1-209ENST00000483563 HMGXB3Q12766 1538 aa35.01■■■■□ 3.19
ARRDC1-209ENST00000483563 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
ARRDC1-209ENST00000483563 BAZ1AQ9NRL2 1556 aaPredicted RBP34.85■■■■□ 3.17
ARRDC1-209ENST00000483563 NESP48681 1621 aa34.79■■■■□ 3.16
ARRDC1-209ENST00000483563 BAZ1BQ9UIG0 1483 aaKnown RBP34.74■■■■□ 3.15
ARRDC1-209ENST00000483563 PEG3Q9GZU2 1588 aa34.64■■■■□ 3.14
ARRDC1-209ENST00000483563 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
ARRDC1-209ENST00000483563 LAMC3Q9Y6N6 1575 aa34.6■■■■□ 3.13
ARRDC1-209ENST00000483563 MROH2BQ7Z745 1585 aa34.54■■■■□ 3.12
ARRDC1-209ENST00000483563 KIF21AQ7Z4S6 1674 aa34.42■■■■□ 3.1
ARRDC1-209ENST00000483563 PDS5BQ9NTI5 1447 aa34.4■■■■□ 3.1
ARRDC1-209ENST00000483563 WIZO95785 1651 aa34.21■■■■□ 3.07
ARRDC1-209ENST00000483563 CADPSQ9ULU8 1353 aa34.15■■■■□ 3.06
ARRDC1-209ENST00000483563 MRC2Q9UBG0 1479 aa34.12■■■■□ 3.05
ARRDC1-209ENST00000483563 WDR62O43379 1518 aa34.04■■■■□ 3.04
ARRDC1-209ENST00000483563 TRIM41Q8WV44 630 aa34.02■■■■□ 3.04
ARRDC1-209ENST00000483563 CEP164Q9UPV0 1460 aa33.9■■■■□ 3.02
ARRDC1-209ENST00000483563 RSF1Q96T23 1441 aaPredicted RBP33.9■■■■□ 3.02
ARRDC1-209ENST00000483563 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
ARRDC1-209ENST00000483563 FANCD2Q9BXW9 1451 aa33.78■■■■□ 3
ARRDC1-209ENST00000483563 CFTRP13569 1480 aa33.66■■■□□ 2.98
ARRDC1-209ENST00000483563 OSCARQ8IYS5 282 aa33.61■■■□□ 2.97
ARRDC1-209ENST00000483563 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
ARRDC1-209ENST00000483563 URB2Q14146 1524 aaKnown RBP33.49■■■□□ 2.95
ARRDC1-209ENST00000483563 CCDC88BA6NC98 1476 aa33.33■■■□□ 2.93
ARRDC1-209ENST00000483563 RIMBP3CA6NJZ7 1639 aa33.25■■■□□ 2.91
ARRDC1-209ENST00000483563 RIMBP3BA6NNM3 1639 aa33.25■■■□□ 2.91
ARRDC1-209ENST00000483563 RIMBP3Q9UFD9 1639 aa33.25■■■□□ 2.91
ARRDC1-209ENST00000483563 IFT140Q96RY7 1462 aa33.24■■■□□ 2.91
ARRDC1-209ENST00000483563 ZNF608Q9ULD9 1512 aaPredicted RBP33.13■■■□□ 2.89
ARRDC1-209ENST00000483563 ARHGEF11O15085 1522 aa33.08■■■□□ 2.89
ARRDC1-209ENST00000483563 TOPBP1Q92547 1522 aa33.08■■■□□ 2.89
ARRDC1-209ENST00000483563 ABCC8Q09428 1581 aa33.06■■■□□ 2.88
ARRDC1-209ENST00000483563 EIF4G3O43432 1585 aaKnown RBP33.02■■■□□ 2.88
ARRDC1-209ENST00000483563 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
ARRDC1-209ENST00000483563 CHD1O14646 1710 aa32.88■■■□□ 2.85
ARRDC1-209ENST00000483563 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.84
ARRDC1-209ENST00000483563 CYB5RLQ6IPT4 315 aa32.81■■■□□ 2.84
ARRDC1-209ENST00000483563 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.842e-10■■■■■ 40
ARRDC1-209ENST00000483563 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
ARRDC1-209ENST00000483563 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
ARRDC1-209ENST00000483563 FBLN2P98095 1184 aa32.7■■■□□ 2.83
ARRDC1-209ENST00000483563 TRHP20396 242 aaPredicted RBP32.66■■■□□ 2.82
ARRDC1-209ENST00000483563 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
ARRDC1-209ENST00000483563 WDR97A6NE52 1622 aa32.58■■■□□ 2.81
ARRDC1-209ENST00000483563 RAD54L2Q9Y4B4 1467 aa32.54■■■□□ 2.8
ARRDC1-209ENST00000483563 SOGA1O94964 1423 aa32.54■■■□□ 2.8
ARRDC1-209ENST00000483563 SNAPC4Q5SXM2 1469 aa32.49■■■□□ 2.79
ARRDC1-209ENST00000483563 TDRD9Q8NDG6 1382 aaKnown RBP32.49■■■□□ 2.79
ARRDC1-209ENST00000483563 SYNJ1O43426 1573 aa32.47■■■□□ 2.79
ARRDC1-209ENST00000483563 CUX1P39880 1505 aa32.46■■■□□ 2.79
ARRDC1-209ENST00000483563 CLASP1Q7Z460 1538 aa32.46■■■□□ 2.79
ARRDC1-209ENST00000483563 FGD5Q6ZNL6 1462 aa32.43■■■□□ 2.78
ARRDC1-209ENST00000483563 MAGI1Q96QZ7 1491 aaPredicted RBP32.43■■■□□ 2.78
ARRDC1-209ENST00000483563 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
ARRDC1-209ENST00000483563 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
ARRDC1-209ENST00000483563 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
ARRDC1-209ENST00000483563 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
ARRDC1-209ENST00000483563 GAPVD1Q14C86 1478 aa32.16■■■□□ 2.74
ARRDC1-209ENST00000483563 BIVM-ERCC5R4GMW8 1640 aa32.12■■■□□ 2.73
ARRDC1-209ENST00000483563 AEBP2Q6ZN18 517 aaPredicted RBP32.12■■■□□ 2.73
ARRDC1-209ENST00000483563 ABCA10Q8WWZ4 1543 aa32.1■■■□□ 2.73
ARRDC1-209ENST00000483563 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
ARRDC1-209ENST00000483563 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
ARRDC1-209ENST00000483563 WRNQ14191 1432 aaPredicted RBP eCLIP32.02■■■□□ 2.72
ARRDC1-209ENST00000483563 GRIN2AQ12879 1464 aa31.92■■■□□ 2.7
ARRDC1-209ENST00000483563 ADAMTS12P58397 1594 aa31.88■■■□□ 2.69
ARRDC1-209ENST00000483563 ERCC6L2Q5T890 1561 aa31.84■■■□□ 2.69
ARRDC1-209ENST00000483563 CEP170Q5SW79 1584 aa31.83■■■□□ 2.69
ARRDC1-209ENST00000483563 NUP160Q12769 1436 aa31.82■■■□□ 2.68
ARRDC1-209ENST00000483563 SHROOM2Q13796 1616 aa31.77■■■□□ 2.68
ARRDC1-209ENST00000483563 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
ARRDC1-209ENST00000483563 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
ARRDC1-209ENST00000483563 KIF13AQ9H1H9 1805 aa31.61■■■□□ 2.65
ARRDC1-209ENST00000483563 PRG4Q92954 1404 aaPredicted RBP31.55■■■□□ 2.64
ARRDC1-209ENST00000483563 JPH4Q96JJ6 628 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms