RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
PTPN7-212ENST00000480836 ABCC9O60706 1549 aa30.22■■■□□ 2.43
PTPN7-212ENST00000480836 CCDC180Q9P1Z9 1646 aa29.99■■■□□ 2.39
PTPN7-212ENST00000480836 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
PTPN7-212ENST00000480836 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
PTPN7-212ENST00000480836 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
PTPN7-212ENST00000480836 NACADO15069 1562 aa28.4■■■□□ 2.14
PTPN7-212ENST00000480836 PABPN1Q86U42 306 aaKnown RBP eCLIP28.22■■■□□ 2.11
PTPN7-212ENST00000480836 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
PTPN7-212ENST00000480836 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
PTPN7-212ENST00000480836 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
PTPN7-212ENST00000480836 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
PTPN7-212ENST00000480836 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
PTPN7-212ENST00000480836 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
PTPN7-212ENST00000480836 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
PTPN7-212ENST00000480836 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
PTPN7-212ENST00000480836 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PTPN7-212ENST00000480836 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
PTPN7-212ENST00000480836 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
PTPN7-212ENST00000480836 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
PTPN7-212ENST00000480836 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
PTPN7-212ENST00000480836 DNAJC5Q9H3Z4 198 aa26.09■■□□□ 1.77
PTPN7-212ENST00000480836 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
PTPN7-212ENST00000480836 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
PTPN7-212ENST00000480836 NESP48681 1621 aa26.01■■□□□ 1.75
PTPN7-212ENST00000480836 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
PTPN7-212ENST00000480836 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
PTPN7-212ENST00000480836 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
PTPN7-212ENST00000480836 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
PTPN7-212ENST00000480836 CUX2O14529 1486 aa25.9■■□□□ 1.74
PTPN7-212ENST00000480836 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
PTPN7-212ENST00000480836 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
PTPN7-212ENST00000480836 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
PTPN7-212ENST00000480836 WIZO95785 1651 aa25.61■■□□□ 1.69
PTPN7-212ENST00000480836 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
PTPN7-212ENST00000480836 CADPSQ9ULU8 1353 aa25.51■■□□□ 1.67
PTPN7-212ENST00000480836 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
PTPN7-212ENST00000480836 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
PTPN7-212ENST00000480836 MRC2Q9UBG0 1479 aa25.3■■□□□ 1.64
PTPN7-212ENST00000480836 WDR62O43379 1518 aa25.25■■□□□ 1.63
PTPN7-212ENST00000480836 CFTRP13569 1480 aa25.21■■□□□ 1.63
PTPN7-212ENST00000480836 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
PTPN7-212ENST00000480836 TOP2AP11388 1531 aaKnown RBP25.18■■□□□ 1.62
PTPN7-212ENST00000480836 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
PTPN7-212ENST00000480836 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
PTPN7-212ENST00000480836 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
PTPN7-212ENST00000480836 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
PTPN7-212ENST00000480836 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
PTPN7-212ENST00000480836 OSCARQ8IYS5 282 aa24.81■■□□□ 1.56
PTPN7-212ENST00000480836 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
PTPN7-212ENST00000480836 TOPBP1Q92547 1522 aa24.74■■□□□ 1.55
PTPN7-212ENST00000480836 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
PTPN7-212ENST00000480836 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
PTPN7-212ENST00000480836 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.523e-7■■■■■ 30.8
PTPN7-212ENST00000480836 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
PTPN7-212ENST00000480836 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
PTPN7-212ENST00000480836 EIF4G3O43432 1585 aaKnown RBP24.52■■□□□ 1.52
PTPN7-212ENST00000480836 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
PTPN7-212ENST00000480836 RIMBP3CA6NJZ7 1639 aa24.48■■□□□ 1.51
PTPN7-212ENST00000480836 RIMBP3BA6NNM3 1639 aa24.48■■□□□ 1.51
PTPN7-212ENST00000480836 RIMBP3Q9UFD9 1639 aa24.48■■□□□ 1.51
PTPN7-212ENST00000480836 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
PTPN7-212ENST00000480836 TDRD9Q8NDG6 1382 aaKnown RBP24.41■■□□□ 1.5
PTPN7-212ENST00000480836 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
PTPN7-212ENST00000480836 SOGA1O94964 1423 aa24.38■■□□□ 1.49
PTPN7-212ENST00000480836 CHD1O14646 1710 aa24.36■■□□□ 1.49
PTPN7-212ENST00000480836 FBLN2P98095 1184 aa24.35■■□□□ 1.49
PTPN7-212ENST00000480836 CUX1P39880 1505 aa24.35■■□□□ 1.49
PTPN7-212ENST00000480836 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
PTPN7-212ENST00000480836 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
PTPN7-212ENST00000480836 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
PTPN7-212ENST00000480836 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
PTPN7-212ENST00000480836 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
PTPN7-212ENST00000480836 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
PTPN7-212ENST00000480836 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
PTPN7-212ENST00000480836 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
PTPN7-212ENST00000480836 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
PTPN7-212ENST00000480836 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
PTPN7-212ENST00000480836 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
PTPN7-212ENST00000480836 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
PTPN7-212ENST00000480836 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
PTPN7-212ENST00000480836 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
PTPN7-212ENST00000480836 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
PTPN7-212ENST00000480836 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
PTPN7-212ENST00000480836 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
PTPN7-212ENST00000480836 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
PTPN7-212ENST00000480836 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
PTPN7-212ENST00000480836 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
PTPN7-212ENST00000480836 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
PTPN7-212ENST00000480836 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
PTPN7-212ENST00000480836 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
PTPN7-212ENST00000480836 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
PTPN7-212ENST00000480836 NUP160Q12769 1436 aa23.77■■□□□ 1.4
PTPN7-212ENST00000480836 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
PTPN7-212ENST00000480836 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
PTPN7-212ENST00000480836 SHROOM2Q13796 1616 aa23.64■■□□□ 1.38
PTPN7-212ENST00000480836 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
PTPN7-212ENST00000480836 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
PTPN7-212ENST00000480836 IGF1RP08069 1367 aa23.52■■□□□ 1.36
PTPN7-212ENST00000480836 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms