RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 AEBP2Q6ZN18 517 aaPredicted RBP30.15■■■□□ 2.42
MATR3-217ENST00000511333 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
MATR3-217ENST00000511333 SENP3Q9H4L4 574 aaPredicted RBP25.85■■□□□ 1.73
MATR3-217ENST00000511333 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
MATR3-217ENST00000511333 FOXD1Q16676 465 aa24.15■■□□□ 1.46
MATR3-217ENST00000511333 POTEDQ86YR6 584 aa23.62■■□□□ 1.37
MATR3-217ENST00000511333 MSH5O43196 834 aa22.93■■□□□ 1.26
MATR3-217ENST00000511333 PIAS4Q8N2W9 510 aaPredicted RBP22.34■■□□□ 1.17
MATR3-217ENST00000511333 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
MATR3-217ENST00000511333 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
MATR3-217ENST00000511333 ADRA2BP18089 450 aa21.81■■□□□ 1.08
MATR3-217ENST00000511333 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
MATR3-217ENST00000511333 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
MATR3-217ENST00000511333 CACNB1Q02641 598 aaPredicted RBP20.01■□□□□ 0.79
MATR3-217ENST00000511333 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
MATR3-217ENST00000511333 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
MATR3-217ENST00000511333 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
MATR3-217ENST00000511333 DCAF8L1A6NGE4 600 aa19.36■□□□□ 0.69
MATR3-217ENST00000511333 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
MATR3-217ENST00000511333 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
MATR3-217ENST00000511333 RNF216Q9NWF9 866 aaPredicted RBP19.01■□□□□ 0.63
MATR3-217ENST00000511333 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
MATR3-217ENST00000511333 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
MATR3-217ENST00000511333 POTEHQ6S545 545 aa18.35■□□□□ 0.53
MATR3-217ENST00000511333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.521e-7■■□□□ 11.5
MATR3-217ENST00000511333 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
MATR3-217ENST00000511333 DSG3P32926 999 aa17.99■□□□□ 0.47
MATR3-217ENST00000511333 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
MATR3-217ENST00000511333 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
MATR3-217ENST00000511333 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
MATR3-217ENST00000511333 CAPN15O75808 1086 aa17.78■□□□□ 0.44
MATR3-217ENST00000511333 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
MATR3-217ENST00000511333 APLP2Q06481 763 aa17.35■□□□□ 0.37
MATR3-217ENST00000511333 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
MATR3-217ENST00000511333 ABCB7O75027 752 aa17.3■□□□□ 0.36
MATR3-217ENST00000511333 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
MATR3-217ENST00000511333 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
MATR3-217ENST00000511333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
MATR3-217ENST00000511333 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
MATR3-217ENST00000511333 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
MATR3-217ENST00000511333 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
MATR3-217ENST00000511333 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
MATR3-217ENST00000511333 KCNA4P22459 653 aa16.85■□□□□ 0.29
MATR3-217ENST00000511333 POLA2Q14181 598 aa16.71■□□□□ 0.27
MATR3-217ENST00000511333 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
MATR3-217ENST00000511333 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
MATR3-217ENST00000511333 PIP4P2Q8N4L2 257 aa16.51■□□□□ 0.23
MATR3-217ENST00000511333 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
MATR3-217ENST00000511333 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
MATR3-217ENST00000511333 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
MATR3-217ENST00000511333 HAX1O00165 279 aa16.3■□□□□ 0.2
MATR3-217ENST00000511333 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
MATR3-217ENST00000511333 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
MATR3-217ENST00000511333 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
MATR3-217ENST00000511333 EVX2Q03828 476 aa16.12■□□□□ 0.17
MATR3-217ENST00000511333 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
MATR3-217ENST00000511333 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
MATR3-217ENST00000511333 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
MATR3-217ENST00000511333 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
MATR3-217ENST00000511333 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
MATR3-217ENST00000511333 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
MATR3-217ENST00000511333 LHX8Q68G74 356 aa15.76■□□□□ 0.11
MATR3-217ENST00000511333 GABBR2O75899 941 aa15.73■□□□□ 0.11
MATR3-217ENST00000511333 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
MATR3-217ENST00000511333 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
MATR3-217ENST00000511333 ATXN8OSP0DMR3 200 aa15.65■□□□□ 0.1
MATR3-217ENST00000511333 FBLN2P98095 1184 aa15.61■□□□□ 0.09
MATR3-217ENST00000511333 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
MATR3-217ENST00000511333 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
MATR3-217ENST00000511333 ZBTB22O15209 634 aa15.52■□□□□ 0.08
MATR3-217ENST00000511333 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
MATR3-217ENST00000511333 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
MATR3-217ENST00000511333 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
MATR3-217ENST00000511333 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
MATR3-217ENST00000511333 CLCN6P51797 869 aa15.34■□□□□ 0.05
MATR3-217ENST00000511333 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
MATR3-217ENST00000511333 CD44P16070 742 aaKnown RBP15.27■□□□□ 0.04
MATR3-217ENST00000511333 PLSCR2Q9NRY7 297 aa15.24■□□□□ 0.03
MATR3-217ENST00000511333 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
MATR3-217ENST00000511333 FARP1Q9Y4F1 1045 aaPredicted RBP15.19■□□□□ 0.02
MATR3-217ENST00000511333 ZNF579Q8NAF0 562 aaKnown RBP15.1■□□□□ 0.01
MATR3-217ENST00000511333 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
MATR3-217ENST00000511333 OTUD5Q96G74 571 aa14.99□□□□□ -0.01
MATR3-217ENST00000511333 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
MATR3-217ENST00000511333 POTEB2H3BUK9 544 aa14.89□□□□□ -0.03
MATR3-217ENST00000511333 GALR2O43603 387 aaPredicted RBP14.88□□□□□ -0.03
MATR3-217ENST00000511333 POTEMA6NI47 508 aa14.87□□□□□ -0.03
MATR3-217ENST00000511333 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
MATR3-217ENST00000511333 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
MATR3-217ENST00000511333 PCDH10Q9P2E7 1040 aa14.76□□□□□ -0.05
MATR3-217ENST00000511333 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
MATR3-217ENST00000511333 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
MATR3-217ENST00000511333 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
MATR3-217ENST00000511333 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
MATR3-217ENST00000511333 ASTLQ6HA08 431 aaPredicted RBP14.6□□□□□ -0.07
MATR3-217ENST00000511333 POTEJP0CG39 1038 aa14.57□□□□□ -0.08
MATR3-217ENST00000511333 LCE2DQ5TA82 110 aaPredicted RBP14.56□□□□□ -0.08
MATR3-217ENST00000511333 METRNQ9UJH8 293 aa14.56□□□□□ -0.08
MATR3-217ENST00000511333 SLC39A7Q92504 469 aa14.53□□□□□ -0.08
MATR3-217ENST00000511333 C7P10643 843 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms