RNA–Protein interactions for RNA: ENST00000549296.1

LMBR1L-210, Transcript of limb development membrane protein 1 like, humanhuman

TSL 5

Gene LMBR1L, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-210ENST00000549296 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.27
LMBR1L-210ENST00000549296 CCDC180Q9P1Z9 1646 aa36.94■■■■□ 3.5
LMBR1L-210ENST00000549296 ABCC9O60706 1549 aa36.03■■■■□ 3.36
LMBR1L-210ENST00000549296 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
LMBR1L-210ENST00000549296 NACADO15069 1562 aa34.74■■■■□ 3.15
LMBR1L-210ENST00000549296 ZCCHC6Q5VYS8 1495 aaKnown RBP34.74■■■■□ 3.15
LMBR1L-210ENST00000549296 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
LMBR1L-210ENST00000549296 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
LMBR1L-210ENST00000549296 DCAF1Q9Y4B6 1507 aa34.51■■■■□ 3.12
LMBR1L-210ENST00000549296 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
LMBR1L-210ENST00000549296 PABPN1Q86U42 306 aaKnown RBP eCLIP33.75■■■□□ 2.99
LMBR1L-210ENST00000549296 SCRIBQ14160 1630 aa33.72■■■□□ 2.99
LMBR1L-210ENST00000549296 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
LMBR1L-210ENST00000549296 SHROOM4Q9ULL8 1493 aa33.35■■■□□ 2.93
LMBR1L-210ENST00000549296 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
LMBR1L-210ENST00000549296 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
LMBR1L-210ENST00000549296 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
LMBR1L-210ENST00000549296 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
LMBR1L-210ENST00000549296 BAZ1AQ9NRL2 1556 aaPredicted RBP32.31■■■□□ 2.76
LMBR1L-210ENST00000549296 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
LMBR1L-210ENST00000549296 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
LMBR1L-210ENST00000549296 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
LMBR1L-210ENST00000549296 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
LMBR1L-210ENST00000549296 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
LMBR1L-210ENST00000549296 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
LMBR1L-210ENST00000549296 HMGXB3Q12766 1538 aa31.89■■■□□ 2.7
LMBR1L-210ENST00000549296 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
LMBR1L-210ENST00000549296 BAZ1BQ9UIG0 1483 aaKnown RBP31.85■■■□□ 2.69
LMBR1L-210ENST00000549296 WIZO95785 1651 aa31.76■■■□□ 2.67
LMBR1L-210ENST00000549296 TOP2AP11388 1531 aaKnown RBP31.45■■■□□ 2.63
LMBR1L-210ENST00000549296 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
LMBR1L-210ENST00000549296 NESP48681 1621 aa31.21■■■□□ 2.59
LMBR1L-210ENST00000549296 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
LMBR1L-210ENST00000549296 LAMC3Q9Y6N6 1575 aa31.17■■■□□ 2.58
LMBR1L-210ENST00000549296 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
LMBR1L-210ENST00000549296 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
LMBR1L-210ENST00000549296 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
LMBR1L-210ENST00000549296 CFTRP13569 1480 aa31■■■□□ 2.55
LMBR1L-210ENST00000549296 KIF21AQ7Z4S6 1674 aa30.79■■■□□ 2.52
LMBR1L-210ENST00000549296 FANCD2Q9BXW9 1451 aa30.78■■■□□ 2.52
LMBR1L-210ENST00000549296 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
LMBR1L-210ENST00000549296 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
LMBR1L-210ENST00000549296 CUX2O14529 1486 aa30.65■■■□□ 2.5
LMBR1L-210ENST00000549296 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
LMBR1L-210ENST00000549296 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
LMBR1L-210ENST00000549296 WDR62O43379 1518 aa30.5■■■□□ 2.47
LMBR1L-210ENST00000549296 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
LMBR1L-210ENST00000549296 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
LMBR1L-210ENST00000549296 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
LMBR1L-210ENST00000549296 DNMBPQ6XZF7 1577 aa30.26■■■□□ 2.43
LMBR1L-210ENST00000549296 CUX1P39880 1505 aa30.12■■■□□ 2.41
LMBR1L-210ENST00000549296 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
LMBR1L-210ENST00000549296 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
LMBR1L-210ENST00000549296 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
LMBR1L-210ENST00000549296 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
LMBR1L-210ENST00000549296 SOGA1O94964 1423 aa29.98■■■□□ 2.39
LMBR1L-210ENST00000549296 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
LMBR1L-210ENST00000549296 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
LMBR1L-210ENST00000549296 TOP2BQ02880 1626 aa29.91■■■□□ 2.38
LMBR1L-210ENST00000549296 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
LMBR1L-210ENST00000549296 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
LMBR1L-210ENST00000549296 BIVM-ERCC5R4GMW8 1640 aa29.88■■■□□ 2.37
LMBR1L-210ENST00000549296 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.368e-9■■■■■ 58.8
LMBR1L-210ENST00000549296 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
LMBR1L-210ENST00000549296 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
LMBR1L-210ENST00000549296 ABCA10Q8WWZ4 1543 aa29.73■■■□□ 2.35
LMBR1L-210ENST00000549296 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
LMBR1L-210ENST00000549296 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
LMBR1L-210ENST00000549296 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
LMBR1L-210ENST00000549296 DNAJC5Q9H3Z4 198 aa29.57■■■□□ 2.32
LMBR1L-210ENST00000549296 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
LMBR1L-210ENST00000549296 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
LMBR1L-210ENST00000549296 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
LMBR1L-210ENST00000549296 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
LMBR1L-210ENST00000549296 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
LMBR1L-210ENST00000549296 FBLN2P98095 1184 aa29.46■■■□□ 2.31
LMBR1L-210ENST00000549296 PBRM1Q86U86 1689 aa29.44■■■□□ 2.3
LMBR1L-210ENST00000549296 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
LMBR1L-210ENST00000549296 KIF27Q86VH2 1401 aa29.42■■■□□ 2.3
LMBR1L-210ENST00000549296 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
LMBR1L-210ENST00000549296 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
LMBR1L-210ENST00000549296 CHD1O14646 1710 aa29.32■■■□□ 2.28
LMBR1L-210ENST00000549296 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
LMBR1L-210ENST00000549296 IGF1RP08069 1367 aa29.29■■■□□ 2.28
LMBR1L-210ENST00000549296 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
LMBR1L-210ENST00000549296 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
LMBR1L-210ENST00000549296 GRIN2AQ12879 1464 aa29.19■■■□□ 2.26
LMBR1L-210ENST00000549296 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
LMBR1L-210ENST00000549296 CARMIL1Q5VZK9 1371 aa29.12■■■□□ 2.25
LMBR1L-210ENST00000549296 CUL7Q14999 1698 aa29.12■■■□□ 2.25
LMBR1L-210ENST00000549296 CLASP1Q7Z460 1538 aa29.05■■■□□ 2.24
LMBR1L-210ENST00000549296 NUP160Q12769 1436 aa29.05■■■□□ 2.24
LMBR1L-210ENST00000549296 CEP170Q5SW79 1584 aa29■■■□□ 2.23
LMBR1L-210ENST00000549296 EEA1Q15075 1411 aa28.97■■■□□ 2.23
LMBR1L-210ENST00000549296 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
LMBR1L-210ENST00000549296 RAPGEF2Q9Y4G8 1499 aa28.94■■■□□ 2.22
LMBR1L-210ENST00000549296 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
LMBR1L-210ENST00000549296 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
LMBR1L-210ENST00000549296 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
LMBR1L-210ENST00000549296 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms