RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
GTF2I-219ENST00000621040 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
GTF2I-219ENST00000621040 ABCC9O60706 1549 aa18.32■□□□□ 0.52
GTF2I-219ENST00000621040 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.48
GTF2I-219ENST00000621040 NACADO15069 1562 aa17.95■□□□□ 0.46
GTF2I-219ENST00000621040 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
GTF2I-219ENST00000621040 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
GTF2I-219ENST00000621040 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
GTF2I-219ENST00000621040 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
GTF2I-219ENST00000621040 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
GTF2I-219ENST00000621040 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
GTF2I-219ENST00000621040 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
GTF2I-219ENST00000621040 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
GTF2I-219ENST00000621040 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
GTF2I-219ENST00000621040 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
GTF2I-219ENST00000621040 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
GTF2I-219ENST00000621040 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
GTF2I-219ENST00000621040 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
GTF2I-219ENST00000621040 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
GTF2I-219ENST00000621040 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
GTF2I-219ENST00000621040 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
GTF2I-219ENST00000621040 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
GTF2I-219ENST00000621040 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
GTF2I-219ENST00000621040 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
GTF2I-219ENST00000621040 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.22
GTF2I-219ENST00000621040 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
GTF2I-219ENST00000621040 WIZO95785 1651 aa16.3■□□□□ 0.2
GTF2I-219ENST00000621040 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
GTF2I-219ENST00000621040 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
GTF2I-219ENST00000621040 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
GTF2I-219ENST00000621040 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
GTF2I-219ENST00000621040 LAMC3Q9Y6N6 1575 aa16.11■□□□□ 0.17
GTF2I-219ENST00000621040 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
GTF2I-219ENST00000621040 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
GTF2I-219ENST00000621040 NESP48681 1621 aa15.95■□□□□ 0.14
GTF2I-219ENST00000621040 CFTRP13569 1480 aa15.91■□□□□ 0.14
GTF2I-219ENST00000621040 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
GTF2I-219ENST00000621040 CUX2O14529 1486 aa15.86■□□□□ 0.13
GTF2I-219ENST00000621040 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
GTF2I-219ENST00000621040 WDR62O43379 1518 aa15.82■□□□□ 0.12
GTF2I-219ENST00000621040 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
GTF2I-219ENST00000621040 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
GTF2I-219ENST00000621040 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
GTF2I-219ENST00000621040 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
GTF2I-219ENST00000621040 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
GTF2I-219ENST00000621040 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
GTF2I-219ENST00000621040 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
GTF2I-219ENST00000621040 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
GTF2I-219ENST00000621040 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
GTF2I-219ENST00000621040 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
GTF2I-219ENST00000621040 TOPBP1Q92547 1522 aa15.52■□□□□ 0.08
GTF2I-219ENST00000621040 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
GTF2I-219ENST00000621040 CUX1P39880 1505 aa15.45■□□□□ 0.06
GTF2I-219ENST00000621040 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
GTF2I-219ENST00000621040 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
GTF2I-219ENST00000621040 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
GTF2I-219ENST00000621040 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
GTF2I-219ENST00000621040 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
GTF2I-219ENST00000621040 ABCA5Q8WWZ7 1642 aa15.33■□□□□ 0.05
GTF2I-219ENST00000621040 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
GTF2I-219ENST00000621040 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
GTF2I-219ENST00000621040 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
GTF2I-219ENST00000621040 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
GTF2I-219ENST00000621040 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
GTF2I-219ENST00000621040 CHD1O14646 1710 aa15.22■□□□□ 0.03
GTF2I-219ENST00000621040 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
GTF2I-219ENST00000621040 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
GTF2I-219ENST00000621040 SOGA1O94964 1423 aa15.17■□□□□ 0.02
GTF2I-219ENST00000621040 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
GTF2I-219ENST00000621040 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
GTF2I-219ENST00000621040 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
GTF2I-219ENST00000621040 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
GTF2I-219ENST00000621040 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
GTF2I-219ENST00000621040 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.019e-6■□□□□ 10.2
GTF2I-219ENST00000621040 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
GTF2I-219ENST00000621040 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
GTF2I-219ENST00000621040 SNAPC4Q5SXM2 1469 aa15.05■□□□□ 0
GTF2I-219ENST00000621040 SYNJ2O15056 1496 aa15.03■□□□□ -0
GTF2I-219ENST00000621040 CUL7Q14999 1698 aa15.02■□□□□ -0
GTF2I-219ENST00000621040 SHROOM2Q13796 1616 aa15.01□□□□□ -0.01
GTF2I-219ENST00000621040 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
GTF2I-219ENST00000621040 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
GTF2I-219ENST00000621040 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.01
GTF2I-219ENST00000621040 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.01
GTF2I-219ENST00000621040 CEP170Q5SW79 1584 aa14.96□□□□□ -0.02
GTF2I-219ENST00000621040 NUP160Q12769 1436 aa14.94□□□□□ -0.02
GTF2I-219ENST00000621040 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
GTF2I-219ENST00000621040 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
GTF2I-219ENST00000621040 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
GTF2I-219ENST00000621040 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
GTF2I-219ENST00000621040 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
GTF2I-219ENST00000621040 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
GTF2I-219ENST00000621040 IGF1RP08069 1367 aa14.83□□□□□ -0.03
GTF2I-219ENST00000621040 CTTNBP2Q8WZ74 1663 aa14.79□□□□□ -0.04
GTF2I-219ENST00000621040 ARAP1Q96P48 1450 aa14.77□□□□□ -0.05
GTF2I-219ENST00000621040 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
GTF2I-219ENST00000621040 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
GTF2I-219ENST00000621040 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
GTF2I-219ENST00000621040 KIF21BO75037 1637 aa14.68□□□□□ -0.06
GTF2I-219ENST00000621040 IQGAP2Q13576 1575 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms