RNA–Protein interactions for RNA: ENST00000411613.5

PLXNB3-202, Transcript of plexin B3, humanhuman

TSL 5

Gene PLXNB3, Length 774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-202ENST00000411613 NISCHQ9Y2I1 1504 aa39.96■■■■□ 3.99
PLXNB3-202ENST00000411613 ABCC9O60706 1549 aa35.48■■■■□ 3.27
PLXNB3-202ENST00000411613 CCDC180Q9P1Z9 1646 aa35.47■■■■□ 3.27
PLXNB3-202ENST00000411613 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
PLXNB3-202ENST00000411613 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
PLXNB3-202ENST00000411613 ZCCHC6Q5VYS8 1495 aaKnown RBP33.39■■■□□ 2.94
PLXNB3-202ENST00000411613 NACADO15069 1562 aa33.37■■■□□ 2.93
PLXNB3-202ENST00000411613 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
PLXNB3-202ENST00000411613 DCAF1Q9Y4B6 1507 aa33.18■■■□□ 2.9
PLXNB3-202ENST00000411613 DCAF8L2P0C7V8 631 aa33.12■■■□□ 2.89
PLXNB3-202ENST00000411613 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
PLXNB3-202ENST00000411613 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.85
PLXNB3-202ENST00000411613 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
PLXNB3-202ENST00000411613 SHROOM4Q9ULL8 1493 aa32.26■■■□□ 2.75
PLXNB3-202ENST00000411613 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
PLXNB3-202ENST00000411613 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
PLXNB3-202ENST00000411613 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
PLXNB3-202ENST00000411613 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
PLXNB3-202ENST00000411613 DNAJC5Q9H3Z4 198 aa31.13■■■□□ 2.57
PLXNB3-202ENST00000411613 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
PLXNB3-202ENST00000411613 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
PLXNB3-202ENST00000411613 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
PLXNB3-202ENST00000411613 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
PLXNB3-202ENST00000411613 CUX2O14529 1486 aa30.75■■■□□ 2.51
PLXNB3-202ENST00000411613 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
PLXNB3-202ENST00000411613 ATAD2BQ9ULI0 1458 aa30.68■■■□□ 2.5
PLXNB3-202ENST00000411613 SMARCA2P51531 1590 aa30.67■■■□□ 2.5
PLXNB3-202ENST00000411613 ERCC6Q03468 1493 aa30.66■■■□□ 2.5
PLXNB3-202ENST00000411613 HMGXB3Q12766 1538 aa30.55■■■□□ 2.48
PLXNB3-202ENST00000411613 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
PLXNB3-202ENST00000411613 WIZO95785 1651 aa30.43■■■□□ 2.46
PLXNB3-202ENST00000411613 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
PLXNB3-202ENST00000411613 NESP48681 1621 aa30.39■■■□□ 2.46
PLXNB3-202ENST00000411613 TOP2AP11388 1531 aaKnown RBP30.19■■■□□ 2.42
PLXNB3-202ENST00000411613 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
PLXNB3-202ENST00000411613 THOC2Q8NI27 1593 aaKnown RBP30.13■■■□□ 2.41
PLXNB3-202ENST00000411613 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
PLXNB3-202ENST00000411613 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.38
PLXNB3-202ENST00000411613 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.37
PLXNB3-202ENST00000411613 SUPT5HO00267 1087 aaKnown RBP29.78■■■□□ 2.36
PLXNB3-202ENST00000411613 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
PLXNB3-202ENST00000411613 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
PLXNB3-202ENST00000411613 WDR62O43379 1518 aa29.68■■■□□ 2.34
PLXNB3-202ENST00000411613 CFTRP13569 1480 aa29.63■■■□□ 2.33
PLXNB3-202ENST00000411613 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
PLXNB3-202ENST00000411613 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
PLXNB3-202ENST00000411613 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
PLXNB3-202ENST00000411613 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
PLXNB3-202ENST00000411613 OSCARQ8IYS5 282 aa29.33■■■□□ 2.29
PLXNB3-202ENST00000411613 URB2Q14146 1524 aaKnown RBP29.28■■■□□ 2.28
PLXNB3-202ENST00000411613 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
PLXNB3-202ENST00000411613 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
PLXNB3-202ENST00000411613 ZNF608Q9ULD9 1512 aaPredicted RBP28.97■■■□□ 2.23
PLXNB3-202ENST00000411613 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
PLXNB3-202ENST00000411613 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
PLXNB3-202ENST00000411613 RIMBP3CA6NJZ7 1639 aa28.9■■■□□ 2.22
PLXNB3-202ENST00000411613 RIMBP3BA6NNM3 1639 aa28.9■■■□□ 2.22
PLXNB3-202ENST00000411613 RIMBP3Q9UFD9 1639 aa28.9■■■□□ 2.22
PLXNB3-202ENST00000411613 CUX1P39880 1505 aa28.84■■■□□ 2.21
PLXNB3-202ENST00000411613 ARHGEF11O15085 1522 aa28.8■■■□□ 2.2
PLXNB3-202ENST00000411613 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.19
PLXNB3-202ENST00000411613 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
PLXNB3-202ENST00000411613 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
PLXNB3-202ENST00000411613 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
PLXNB3-202ENST00000411613 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
PLXNB3-202ENST00000411613 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
PLXNB3-202ENST00000411613 AQRO60306 1485 aaKnown RBP eCLIP28.68■■■□□ 2.18
PLXNB3-202ENST00000411613 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
PLXNB3-202ENST00000411613 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
PLXNB3-202ENST00000411613 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
PLXNB3-202ENST00000411613 CHD1O14646 1710 aa28.57■■■□□ 2.16
PLXNB3-202ENST00000411613 FBLN2P98095 1184 aa28.56■■■□□ 2.16
PLXNB3-202ENST00000411613 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
PLXNB3-202ENST00000411613 SOGA1O94964 1423 aa28.53■■■□□ 2.16
PLXNB3-202ENST00000411613 RAD54L2Q9Y4B4 1467 aa28.51■■■□□ 2.15
PLXNB3-202ENST00000411613 ARAP1Q96P48 1450 aa28.49■■■□□ 2.15
PLXNB3-202ENST00000411613 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
PLXNB3-202ENST00000411613 TDRD9Q8NDG6 1382 aaKnown RBP28.46■■■□□ 2.15
PLXNB3-202ENST00000411613 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
PLXNB3-202ENST00000411613 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
PLXNB3-202ENST00000411613 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
PLXNB3-202ENST00000411613 CHMP7Q8WUX9 453 aaPredicted RBP28.32■■■□□ 2.12
PLXNB3-202ENST00000411613 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
PLXNB3-202ENST00000411613 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
PLXNB3-202ENST00000411613 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
PLXNB3-202ENST00000411613 GAPVD1Q14C86 1478 aa28.25■■■□□ 2.11
PLXNB3-202ENST00000411613 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
PLXNB3-202ENST00000411613 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
PLXNB3-202ENST00000411613 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
PLXNB3-202ENST00000411613 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
PLXNB3-202ENST00000411613 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
PLXNB3-202ENST00000411613 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
PLXNB3-202ENST00000411613 CUL7Q14999 1698 aa27.97■■■□□ 2.07
PLXNB3-202ENST00000411613 IGF1RP08069 1367 aa27.96■■■□□ 2.07
PLXNB3-202ENST00000411613 FHAD1B1AJZ9 1412 aa27.95■■■□□ 2.07
PLXNB3-202ENST00000411613 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
PLXNB3-202ENST00000411613 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
PLXNB3-202ENST00000411613 EEA1Q15075 1411 aa27.88■■■□□ 2.05
PLXNB3-202ENST00000411613 NUP160Q12769 1436 aa27.83■■■□□ 2.05
PLXNB3-202ENST00000411613 ERCC6L2Q5T890 1561 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms