RNA–Protein interactions for RNA: ENST00000601973.1

ZC3H4-205, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS ALT2 TSL 5

Gene ZC3H4, Length 4,895 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-205ENST00000601973 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
ZC3H4-205ENST00000601973 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
ZC3H4-205ENST00000601973 PELP1Q8IZL8 1130 aaKnown RBP24.37■■□□□ 1.49
ZC3H4-205ENST00000601973 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
ZC3H4-205ENST00000601973 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
ZC3H4-205ENST00000601973 APLP2Q06481 763 aa23.47■■□□□ 1.35
ZC3H4-205ENST00000601973 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
ZC3H4-205ENST00000601973 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
ZC3H4-205ENST00000601973 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
ZC3H4-205ENST00000601973 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
ZC3H4-205ENST00000601973 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
ZC3H4-205ENST00000601973 MYT1Q01538 1121 aa23■■□□□ 1.27
ZC3H4-205ENST00000601973 ZEB1P37275 1124 aaPredicted RBP22.99■■□□□ 1.27
ZC3H4-205ENST00000601973 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
ZC3H4-205ENST00000601973 NEFLP07196 543 aa22.68■■□□□ 1.22
ZC3H4-205ENST00000601973 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
ZC3H4-205ENST00000601973 HRCP23327 699 aa22.36■■□□□ 1.17
ZC3H4-205ENST00000601973 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
ZC3H4-205ENST00000601973 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
ZC3H4-205ENST00000601973 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
ZC3H4-205ENST00000601973 UBTFP17480 764 aaKnown RBP22.19■■□□□ 1.14
ZC3H4-205ENST00000601973 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
ZC3H4-205ENST00000601973 DAXXQ9UER7 740 aaPredicted RBP22.13■■□□□ 1.13
ZC3H4-205ENST00000601973 ABCC9O60706 1549 aa21.93■■□□□ 1.1
ZC3H4-205ENST00000601973 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
ZC3H4-205ENST00000601973 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
ZC3H4-205ENST00000601973 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
ZC3H4-205ENST00000601973 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
ZC3H4-205ENST00000601973 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
ZC3H4-205ENST00000601973 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
ZC3H4-205ENST00000601973 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
ZC3H4-205ENST00000601973 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
ZC3H4-205ENST00000601973 ITGAEP38570 1179 aa21.47■■□□□ 1.03
ZC3H4-205ENST00000601973 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
ZC3H4-205ENST00000601973 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
ZC3H4-205ENST00000601973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
ZC3H4-205ENST00000601973 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
ZC3H4-205ENST00000601973 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
ZC3H4-205ENST00000601973 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
ZC3H4-205ENST00000601973 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
ZC3H4-205ENST00000601973 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
ZC3H4-205ENST00000601973 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
ZC3H4-205ENST00000601973 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
ZC3H4-205ENST00000601973 CDK11AQ9UQ88 783 aaPredicted RBP21.08■□□□□ 0.97
ZC3H4-205ENST00000601973 SCRIBQ14160 1630 aa21.08■□□□□ 0.96
ZC3H4-205ENST00000601973 ZBTB47Q9UFB7 747 aaPredicted RBP21.07■□□□□ 0.96
ZC3H4-205ENST00000601973 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
ZC3H4-205ENST00000601973 ANP32CO43423 234 aa20.99■□□□□ 0.95
ZC3H4-205ENST00000601973 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
ZC3H4-205ENST00000601973 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
ZC3H4-205ENST00000601973 BCANQ96GW7 911 aa20.87■□□□□ 0.93
ZC3H4-205ENST00000601973 ANP32AP39687 249 aaKnown RBP20.81■□□□□ 0.92
ZC3H4-205ENST00000601973 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
ZC3H4-205ENST00000601973 CANXP27824 592 aaKnown RBP20.77■□□□□ 0.92
ZC3H4-205ENST00000601973 NEFMP07197 916 aa20.76■□□□□ 0.91
ZC3H4-205ENST00000601973 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
ZC3H4-205ENST00000601973 ANP32BQ92688 251 aaKnown RBP20.68■□□□□ 0.9
ZC3H4-205ENST00000601973 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
ZC3H4-205ENST00000601973 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
ZC3H4-205ENST00000601973 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
ZC3H4-205ENST00000601973 NACADO15069 1562 aa20.6■□□□□ 0.89
ZC3H4-205ENST00000601973 GLIPR1L2Q4G1C9 344 aa20.57■□□□□ 0.88
ZC3H4-205ENST00000601973 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
ZC3H4-205ENST00000601973 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.88
ZC3H4-205ENST00000601973 EIF5BO60841 1220 aaKnown RBP20.51■□□□□ 0.87
ZC3H4-205ENST00000601973 UPF2Q9HAU5 1272 aaKnown RBP20.49■□□□□ 0.87
ZC3H4-205ENST00000601973 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
ZC3H4-205ENST00000601973 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
ZC3H4-205ENST00000601973 NPM2Q86SE8 214 aaKnown RBP20.44■□□□□ 0.86
ZC3H4-205ENST00000601973 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
ZC3H4-205ENST00000601973 FBLN2P98095 1184 aa20.4■□□□□ 0.86
ZC3H4-205ENST00000601973 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
ZC3H4-205ENST00000601973 FKBP8Q14318 412 aa20.32■□□□□ 0.84
ZC3H4-205ENST00000601973 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
ZC3H4-205ENST00000601973 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
ZC3H4-205ENST00000601973 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
ZC3H4-205ENST00000601973 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.83
ZC3H4-205ENST00000601973 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
ZC3H4-205ENST00000601973 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
ZC3H4-205ENST00000601973 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
ZC3H4-205ENST00000601973 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
ZC3H4-205ENST00000601973 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.82
ZC3H4-205ENST00000601973 ANP32EQ9BTT0 268 aa20.09■□□□□ 0.81
ZC3H4-205ENST00000601973 FAM9BQ8IZU0 186 aa20.09■□□□□ 0.81
ZC3H4-205ENST00000601973 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
ZC3H4-205ENST00000601973 TMC1Q8TDI8 760 aa20.08■□□□□ 0.81
ZC3H4-205ENST00000601973 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
ZC3H4-205ENST00000601973 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
ZC3H4-205ENST00000601973 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
ZC3H4-205ENST00000601973 MIER1Q8N108 512 aa20.03■□□□□ 0.8
ZC3H4-205ENST00000601973 NBR1Q14596 966 aa20.02■□□□□ 0.79
ZC3H4-205ENST00000601973 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
ZC3H4-205ENST00000601973 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
ZC3H4-205ENST00000601973 EEA1Q15075 1411 aa19.99■□□□□ 0.79
ZC3H4-205ENST00000601973 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
ZC3H4-205ENST00000601973 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
ZC3H4-205ENST00000601973 DDRGK1Q96HY6 314 aa19.97■□□□□ 0.79
ZC3H4-205ENST00000601973 MYH16Q9H6N6 1097 aa19.97■□□□□ 0.79
ZC3H4-205ENST00000601973 BECN1Q14457 450 aa19.96■□□□□ 0.79
ZC3H4-205ENST00000601973 MRS2Q9HD23 443 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms