RNA–Protein interactions for RNA: ENST00000550867.5

LMBR1L-216, Transcript of limb development membrane protein 1 like, humanhuman

TSL 1 (best)

Gene LMBR1L, Length 2,800 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-216ENST00000550867 NISCHQ9Y2I1 1504 aa30.53■■■□□ 2.48
LMBR1L-216ENST00000550867 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
LMBR1L-216ENST00000550867 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
LMBR1L-216ENST00000550867 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
LMBR1L-216ENST00000550867 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
LMBR1L-216ENST00000550867 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
LMBR1L-216ENST00000550867 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
LMBR1L-216ENST00000550867 ABCC9O60706 1549 aa24.71■■□□□ 1.55
LMBR1L-216ENST00000550867 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
LMBR1L-216ENST00000550867 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
LMBR1L-216ENST00000550867 NACADO15069 1562 aa24.4■■□□□ 1.5
LMBR1L-216ENST00000550867 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
LMBR1L-216ENST00000550867 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
LMBR1L-216ENST00000550867 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.4
LMBR1L-216ENST00000550867 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
LMBR1L-216ENST00000550867 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
LMBR1L-216ENST00000550867 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
LMBR1L-216ENST00000550867 WIZO95785 1651 aa23.55■■□□□ 1.36
LMBR1L-216ENST00000550867 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
LMBR1L-216ENST00000550867 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
LMBR1L-216ENST00000550867 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.351e-7■■■■□ 20.9
LMBR1L-216ENST00000550867 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
LMBR1L-216ENST00000550867 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
LMBR1L-216ENST00000550867 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
LMBR1L-216ENST00000550867 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
LMBR1L-216ENST00000550867 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
LMBR1L-216ENST00000550867 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
LMBR1L-216ENST00000550867 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
LMBR1L-216ENST00000550867 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
LMBR1L-216ENST00000550867 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
LMBR1L-216ENST00000550867 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
LMBR1L-216ENST00000550867 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
LMBR1L-216ENST00000550867 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
LMBR1L-216ENST00000550867 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
LMBR1L-216ENST00000550867 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
LMBR1L-216ENST00000550867 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
LMBR1L-216ENST00000550867 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
LMBR1L-216ENST00000550867 PCGF6Q9BYE7 350 aa22.46■■□□□ 1.19
LMBR1L-216ENST00000550867 SOGA1O94964 1423 aa22.45■■□□□ 1.18
LMBR1L-216ENST00000550867 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
LMBR1L-216ENST00000550867 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
LMBR1L-216ENST00000550867 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
LMBR1L-216ENST00000550867 EEA1Q15075 1411 aa22.27■■□□□ 1.16
LMBR1L-216ENST00000550867 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
LMBR1L-216ENST00000550867 CFTRP13569 1480 aa22.21■■□□□ 1.15
LMBR1L-216ENST00000550867 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
LMBR1L-216ENST00000550867 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
LMBR1L-216ENST00000550867 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
LMBR1L-216ENST00000550867 CUX1P39880 1505 aa22.1■■□□□ 1.13
LMBR1L-216ENST00000550867 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
LMBR1L-216ENST00000550867 TNIKQ9UKE5 1360 aa22.09■■□□□ 1.13
LMBR1L-216ENST00000550867 HRCP23327 699 aa22.09■■□□□ 1.13
LMBR1L-216ENST00000550867 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
LMBR1L-216ENST00000550867 CEP162Q5TB80 1403 aa22.08■■□□□ 1.13
LMBR1L-216ENST00000550867 GOLGA3Q08378 1498 aa22.08■■□□□ 1.12
LMBR1L-216ENST00000550867 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
LMBR1L-216ENST00000550867 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
LMBR1L-216ENST00000550867 KIF21BO75037 1637 aa22.03■■□□□ 1.12
LMBR1L-216ENST00000550867 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
LMBR1L-216ENST00000550867 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
LMBR1L-216ENST00000550867 NESP48681 1621 aa21.86■■□□□ 1.09
LMBR1L-216ENST00000550867 FANCD2Q9BXW9 1451 aa21.84■■□□□ 1.09
LMBR1L-216ENST00000550867 KIF27Q86VH2 1401 aa21.83■■□□□ 1.08
LMBR1L-216ENST00000550867 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
LMBR1L-216ENST00000550867 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
LMBR1L-216ENST00000550867 CLIP1P30622 1438 aa21.79■■□□□ 1.08
LMBR1L-216ENST00000550867 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
LMBR1L-216ENST00000550867 TTBK1Q5TCY1 1321 aaPredicted RBP21.77■■□□□ 1.08
LMBR1L-216ENST00000550867 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
LMBR1L-216ENST00000550867 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
LMBR1L-216ENST00000550867 CUX2O14529 1486 aa21.73■■□□□ 1.07
LMBR1L-216ENST00000550867 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
LMBR1L-216ENST00000550867 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
LMBR1L-216ENST00000550867 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
LMBR1L-216ENST00000550867 IGF1RP08069 1367 aa21.64■■□□□ 1.05
LMBR1L-216ENST00000550867 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
LMBR1L-216ENST00000550867 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
LMBR1L-216ENST00000550867 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
LMBR1L-216ENST00000550867 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
LMBR1L-216ENST00000550867 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
LMBR1L-216ENST00000550867 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
LMBR1L-216ENST00000550867 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
LMBR1L-216ENST00000550867 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
LMBR1L-216ENST00000550867 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
LMBR1L-216ENST00000550867 APLP2Q06481 763 aa21.45■■□□□ 1.02
LMBR1L-216ENST00000550867 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
LMBR1L-216ENST00000550867 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
LMBR1L-216ENST00000550867 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
LMBR1L-216ENST00000550867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
LMBR1L-216ENST00000550867 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
LMBR1L-216ENST00000550867 CUL7Q14999 1698 aa21.34■■□□□ 1.01
LMBR1L-216ENST00000550867 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
LMBR1L-216ENST00000550867 CCER1Q8TC90 406 aaPredicted RBP21.31■■□□□ 1
LMBR1L-216ENST00000550867 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
LMBR1L-216ENST00000550867 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
LMBR1L-216ENST00000550867 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
LMBR1L-216ENST00000550867 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
LMBR1L-216ENST00000550867 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
LMBR1L-216ENST00000550867 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
LMBR1L-216ENST00000550867 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms