RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
PTPN7-210ENST00000477625 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
PTPN7-210ENST00000477625 ABCC9O60706 1549 aa26.39■■□□□ 1.82
PTPN7-210ENST00000477625 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
PTPN7-210ENST00000477625 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
PTPN7-210ENST00000477625 NACADO15069 1562 aa25.21■■□□□ 1.63
PTPN7-210ENST00000477625 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
PTPN7-210ENST00000477625 ZCCHC6Q5VYS8 1495 aaKnown RBP24.93■■□□□ 1.58
PTPN7-210ENST00000477625 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
PTPN7-210ENST00000477625 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
PTPN7-210ENST00000477625 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.54
PTPN7-210ENST00000477625 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
PTPN7-210ENST00000477625 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
PTPN7-210ENST00000477625 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
PTPN7-210ENST00000477625 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
PTPN7-210ENST00000477625 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
PTPN7-210ENST00000477625 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
PTPN7-210ENST00000477625 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
PTPN7-210ENST00000477625 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
PTPN7-210ENST00000477625 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
PTPN7-210ENST00000477625 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
PTPN7-210ENST00000477625 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
PTPN7-210ENST00000477625 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
PTPN7-210ENST00000477625 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
PTPN7-210ENST00000477625 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
PTPN7-210ENST00000477625 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
PTPN7-210ENST00000477625 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
PTPN7-210ENST00000477625 WIZO95785 1651 aa22.84■■□□□ 1.25
PTPN7-210ENST00000477625 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
PTPN7-210ENST00000477625 NESP48681 1621 aa22.78■■□□□ 1.24
PTPN7-210ENST00000477625 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
PTPN7-210ENST00000477625 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
PTPN7-210ENST00000477625 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
PTPN7-210ENST00000477625 CUX2O14529 1486 aa22.6■■□□□ 1.21
PTPN7-210ENST00000477625 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
PTPN7-210ENST00000477625 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
PTPN7-210ENST00000477625 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.18
PTPN7-210ENST00000477625 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
PTPN7-210ENST00000477625 CFTRP13569 1480 aa22.42■■□□□ 1.18
PTPN7-210ENST00000477625 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
PTPN7-210ENST00000477625 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
PTPN7-210ENST00000477625 MRC2Q9UBG0 1479 aa22.32■■□□□ 1.16
PTPN7-210ENST00000477625 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
PTPN7-210ENST00000477625 WDR62O43379 1518 aa22.24■■□□□ 1.15
PTPN7-210ENST00000477625 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
PTPN7-210ENST00000477625 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
PTPN7-210ENST00000477625 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
PTPN7-210ENST00000477625 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
PTPN7-210ENST00000477625 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
PTPN7-210ENST00000477625 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
PTPN7-210ENST00000477625 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
PTPN7-210ENST00000477625 IFT140Q96RY7 1462 aa21.87■■□□□ 1.09
PTPN7-210ENST00000477625 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
PTPN7-210ENST00000477625 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
PTPN7-210ENST00000477625 OSCARQ8IYS5 282 aa21.7■■□□□ 1.06
PTPN7-210ENST00000477625 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
PTPN7-210ENST00000477625 SOGA1O94964 1423 aa21.69■■□□□ 1.06
PTPN7-210ENST00000477625 CUX1P39880 1505 aa21.69■■□□□ 1.06
PTPN7-210ENST00000477625 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
PTPN7-210ENST00000477625 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.064e-7■■■■■ 30
PTPN7-210ENST00000477625 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
PTPN7-210ENST00000477625 EIF4G3O43432 1585 aaKnown RBP21.64■■□□□ 1.05
PTPN7-210ENST00000477625 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
PTPN7-210ENST00000477625 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
PTPN7-210ENST00000477625 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
PTPN7-210ENST00000477625 FBLN2P98095 1184 aa21.46■■□□□ 1.03
PTPN7-210ENST00000477625 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
PTPN7-210ENST00000477625 ABCA10Q8WWZ4 1543 aa21.44■■□□□ 1.02
PTPN7-210ENST00000477625 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
PTPN7-210ENST00000477625 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
PTPN7-210ENST00000477625 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
PTPN7-210ENST00000477625 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
PTPN7-210ENST00000477625 GAPVD1Q14C86 1478 aa21.4■■□□□ 1.02
PTPN7-210ENST00000477625 CHD1O14646 1710 aa21.39■■□□□ 1.01
PTPN7-210ENST00000477625 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.01
PTPN7-210ENST00000477625 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
PTPN7-210ENST00000477625 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
PTPN7-210ENST00000477625 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1.01
PTPN7-210ENST00000477625 SYNJ2O15056 1496 aa21.32■■□□□ 1
PTPN7-210ENST00000477625 PBRM1Q86U86 1689 aa21.3■■□□□ 1
PTPN7-210ENST00000477625 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
PTPN7-210ENST00000477625 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
PTPN7-210ENST00000477625 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
PTPN7-210ENST00000477625 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
PTPN7-210ENST00000477625 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
PTPN7-210ENST00000477625 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
PTPN7-210ENST00000477625 FHAD1B1AJZ9 1412 aa21.16■□□□□ 0.98
PTPN7-210ENST00000477625 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
PTPN7-210ENST00000477625 ADAMTS12P58397 1594 aa21.14■□□□□ 0.98
PTPN7-210ENST00000477625 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
PTPN7-210ENST00000477625 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
PTPN7-210ENST00000477625 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
PTPN7-210ENST00000477625 NUP160Q12769 1436 aa21.06■□□□□ 0.96
PTPN7-210ENST00000477625 IGF1RP08069 1367 aa21.04■□□□□ 0.96
PTPN7-210ENST00000477625 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
PTPN7-210ENST00000477625 CUL7Q14999 1698 aa20.91■□□□□ 0.94
PTPN7-210ENST00000477625 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
PTPN7-210ENST00000477625 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
PTPN7-210ENST00000477625 SHROOM2Q13796 1616 aa20.89■□□□□ 0.94
PTPN7-210ENST00000477625 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms