RNA–Protein interactions for RNA: ENST00000439214.1

SNAP29-202, Transcript of synaptosome associated protein 29, humanhuman

TSL 3

Gene SNAP29, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-202ENST00000439214 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
SNAP29-202ENST00000439214 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
SNAP29-202ENST00000439214 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
SNAP29-202ENST00000439214 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
SNAP29-202ENST00000439214 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
SNAP29-202ENST00000439214 FOXD1Q16676 465 aa17.49■□□□□ 0.39
SNAP29-202ENST00000439214 ADRA2BP18089 450 aa16.43■□□□□ 0.22
SNAP29-202ENST00000439214 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
SNAP29-202ENST00000439214 MSH5O43196 834 aa16.32■□□□□ 0.2
SNAP29-202ENST00000439214 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
SNAP29-202ENST00000439214 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
SNAP29-202ENST00000439214 KCNA4P22459 653 aa15.68■□□□□ 0.1
SNAP29-202ENST00000439214 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
SNAP29-202ENST00000439214 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
SNAP29-202ENST00000439214 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
SNAP29-202ENST00000439214 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
SNAP29-202ENST00000439214 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
SNAP29-202ENST00000439214 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
SNAP29-202ENST00000439214 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
SNAP29-202ENST00000439214 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
SNAP29-202ENST00000439214 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
SNAP29-202ENST00000439214 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
SNAP29-202ENST00000439214 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
SNAP29-202ENST00000439214 ZBTB22O15209 634 aa14.34□□□□□ -0.11
SNAP29-202ENST00000439214 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
SNAP29-202ENST00000439214 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
SNAP29-202ENST00000439214 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
SNAP29-202ENST00000439214 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
SNAP29-202ENST00000439214 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.17
SNAP29-202ENST00000439214 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
SNAP29-202ENST00000439214 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
SNAP29-202ENST00000439214 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
SNAP29-202ENST00000439214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.24e-7■□□□□ 9.2
SNAP29-202ENST00000439214 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
SNAP29-202ENST00000439214 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
SNAP29-202ENST00000439214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SNAP29-202ENST00000439214 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
SNAP29-202ENST00000439214 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
SNAP29-202ENST00000439214 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
SNAP29-202ENST00000439214 FKBP8Q14318 412 aa13.43□□□□□ -0.26
SNAP29-202ENST00000439214 APLP2Q06481 763 aa13.42□□□□□ -0.26
SNAP29-202ENST00000439214 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
SNAP29-202ENST00000439214 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
SNAP29-202ENST00000439214 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
SNAP29-202ENST00000439214 CAPN15O75808 1086 aa13.14□□□□□ -0.31
SNAP29-202ENST00000439214 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
SNAP29-202ENST00000439214 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
SNAP29-202ENST00000439214 DSG3P32926 999 aa13.07□□□□□ -0.32
SNAP29-202ENST00000439214 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
SNAP29-202ENST00000439214 FBLN2P98095 1184 aa13.01□□□□□ -0.33
SNAP29-202ENST00000439214 POLA2Q14181 598 aa12.94□□□□□ -0.34
SNAP29-202ENST00000439214 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
SNAP29-202ENST00000439214 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
SNAP29-202ENST00000439214 ABCB7O75027 752 aa12.85□□□□□ -0.35
SNAP29-202ENST00000439214 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
SNAP29-202ENST00000439214 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
SNAP29-202ENST00000439214 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
SNAP29-202ENST00000439214 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
SNAP29-202ENST00000439214 PROM2Q8N271 834 aa12.55□□□□□ -0.4
SNAP29-202ENST00000439214 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
SNAP29-202ENST00000439214 POTEHQ6S545 545 aa12.49□□□□□ -0.41
SNAP29-202ENST00000439214 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
SNAP29-202ENST00000439214 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
SNAP29-202ENST00000439214 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
SNAP29-202ENST00000439214 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
SNAP29-202ENST00000439214 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
SNAP29-202ENST00000439214 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
SNAP29-202ENST00000439214 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
SNAP29-202ENST00000439214 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
SNAP29-202ENST00000439214 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
SNAP29-202ENST00000439214 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNAP29-202ENST00000439214 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
SNAP29-202ENST00000439214 MIER1Q8N108 512 aa12.31□□□□□ -0.44
SNAP29-202ENST00000439214 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
SNAP29-202ENST00000439214 NISCHQ9Y2I1 1504 aa12.3□□□□□ -0.44
SNAP29-202ENST00000439214 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
SNAP29-202ENST00000439214 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
SNAP29-202ENST00000439214 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
SNAP29-202ENST00000439214 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
SNAP29-202ENST00000439214 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
SNAP29-202ENST00000439214 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
SNAP29-202ENST00000439214 PKD2Q13563 968 aa12.14□□□□□ -0.47
SNAP29-202ENST00000439214 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
SNAP29-202ENST00000439214 PLCB2Q00722 1185 aa12.08□□□□□ -0.48
SNAP29-202ENST00000439214 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
SNAP29-202ENST00000439214 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
SNAP29-202ENST00000439214 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
SNAP29-202ENST00000439214 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
SNAP29-202ENST00000439214 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
SNAP29-202ENST00000439214 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
SNAP29-202ENST00000439214 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
SNAP29-202ENST00000439214 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
SNAP29-202ENST00000439214 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
SNAP29-202ENST00000439214 RGL2O15211 777 aa11.9□□□□□ -0.5
SNAP29-202ENST00000439214 GSE1Q14687 1217 aa11.89□□□□□ -0.51
SNAP29-202ENST00000439214 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
SNAP29-202ENST00000439214 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
SNAP29-202ENST00000439214 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
SNAP29-202ENST00000439214 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
SNAP29-202ENST00000439214 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms