RNA–Protein interactions for RNA: ENST00000614048.1

GTF2I-214, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-214ENST00000614048 NISCHQ9Y2I1 1504 aa19.62■□□□□ 0.73
GTF2I-214ENST00000614048 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
GTF2I-214ENST00000614048 MYT1Q01538 1121 aa18.54■□□□□ 0.56
GTF2I-214ENST00000614048 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
GTF2I-214ENST00000614048 PRKCSHP14314 528 aaPredicted RBP18.21■□□□□ 0.51
GTF2I-214ENST00000614048 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
GTF2I-214ENST00000614048 APLP2Q06481 763 aa17.84■□□□□ 0.45
GTF2I-214ENST00000614048 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
GTF2I-214ENST00000614048 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
GTF2I-214ENST00000614048 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
GTF2I-214ENST00000614048 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
GTF2I-214ENST00000614048 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
GTF2I-214ENST00000614048 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
GTF2I-214ENST00000614048 BCL11AQ9H165 835 aa16.9■□□□□ 0.3
GTF2I-214ENST00000614048 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
GTF2I-214ENST00000614048 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
GTF2I-214ENST00000614048 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
GTF2I-214ENST00000614048 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
GTF2I-214ENST00000614048 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
GTF2I-214ENST00000614048 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
GTF2I-214ENST00000614048 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
GTF2I-214ENST00000614048 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
GTF2I-214ENST00000614048 ARXQ96QS3 562 aa16.42■□□□□ 0.22
GTF2I-214ENST00000614048 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
GTF2I-214ENST00000614048 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
GTF2I-214ENST00000614048 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
GTF2I-214ENST00000614048 TULP1O00294 542 aaPredicted RBP16.13■□□□□ 0.17
GTF2I-214ENST00000614048 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
GTF2I-214ENST00000614048 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
GTF2I-214ENST00000614048 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
GTF2I-214ENST00000614048 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
GTF2I-214ENST00000614048 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
GTF2I-214ENST00000614048 HOMEZQ8IX15 550 aa15.91■□□□□ 0.14
GTF2I-214ENST00000614048 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
GTF2I-214ENST00000614048 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
GTF2I-214ENST00000614048 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
GTF2I-214ENST00000614048 HRCP23327 699 aa15.81■□□□□ 0.12
GTF2I-214ENST00000614048 KCNA4P22459 653 aa15.79■□□□□ 0.12
GTF2I-214ENST00000614048 TAOK2Q9UL54 1235 aa15.72■□□□□ 0.11
GTF2I-214ENST00000614048 PCGF6Q9BYE7 350 aa15.71■□□□□ 0.11
GTF2I-214ENST00000614048 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
GTF2I-214ENST00000614048 ABCC9O60706 1549 aa15.69■□□□□ 0.1
GTF2I-214ENST00000614048 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
GTF2I-214ENST00000614048 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
GTF2I-214ENST00000614048 PKNOX2Q96KN3 472 aa15.6■□□□□ 0.09
GTF2I-214ENST00000614048 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
GTF2I-214ENST00000614048 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
GTF2I-214ENST00000614048 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
GTF2I-214ENST00000614048 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
GTF2I-214ENST00000614048 TPRNQ4KMQ1 711 aa15.53■□□□□ 0.08
GTF2I-214ENST00000614048 PDE4CQ08493 712 aa15.51■□□□□ 0.07
GTF2I-214ENST00000614048 C14orf37Q86TY3 774 aa15.46■□□□□ 0.07
GTF2I-214ENST00000614048 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
GTF2I-214ENST00000614048 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
GTF2I-214ENST00000614048 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
GTF2I-214ENST00000614048 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
GTF2I-214ENST00000614048 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
GTF2I-214ENST00000614048 NEFLP07196 543 aa15.37■□□□□ 0.05
GTF2I-214ENST00000614048 NACADO15069 1562 aa15.36■□□□□ 0.05
GTF2I-214ENST00000614048 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
GTF2I-214ENST00000614048 GTF3C3Q9Y5Q9 886 aa15.35■□□□□ 0.05
GTF2I-214ENST00000614048 ANP32EQ9BTT0 268 aa15.31■□□□□ 0.04
GTF2I-214ENST00000614048 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
GTF2I-214ENST00000614048 CECR2Q9BXF3 1484 aa15.29■□□□□ 0.04
GTF2I-214ENST00000614048 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.03
GTF2I-214ENST00000614048 BCANQ96GW7 911 aa15.26■□□□□ 0.03
GTF2I-214ENST00000614048 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
GTF2I-214ENST00000614048 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
GTF2I-214ENST00000614048 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
GTF2I-214ENST00000614048 WIZO95785 1651 aa15.16■□□□□ 0.02
GTF2I-214ENST00000614048 ZEB1P37275 1124 aaPredicted RBP15.14■□□□□ 0.01
GTF2I-214ENST00000614048 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
GTF2I-214ENST00000614048 FGD1P98174 961 aa15.11■□□□□ 0.01
GTF2I-214ENST00000614048 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
GTF2I-214ENST00000614048 FBXO3Q9UK99 471 aa15.05■□□□□ 0
GTF2I-214ENST00000614048 BRD2P25440 801 aaKnown RBP15.04■□□□□ -0
GTF2I-214ENST00000614048 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
GTF2I-214ENST00000614048 CCDC136Q96JN2 1154 aa15.02□□□□□ -0.01
GTF2I-214ENST00000614048 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
GTF2I-214ENST00000614048 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
GTF2I-214ENST00000614048 TMEM132AQ24JP5 1023 aa14.95□□□□□ -0.02
GTF2I-214ENST00000614048 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
GTF2I-214ENST00000614048 SMARCA4P51532 1647 aa14.91□□□□□ -0.02
GTF2I-214ENST00000614048 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
GTF2I-214ENST00000614048 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
GTF2I-214ENST00000614048 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
GTF2I-214ENST00000614048 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
GTF2I-214ENST00000614048 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
GTF2I-214ENST00000614048 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
GTF2I-214ENST00000614048 PLCB2Q00722 1185 aa14.85□□□□□ -0.03
GTF2I-214ENST00000614048 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
GTF2I-214ENST00000614048 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
GTF2I-214ENST00000614048 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.04
GTF2I-214ENST00000614048 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
GTF2I-214ENST00000614048 AAMPQ13685 434 aa14.82□□□□□ -0.04
GTF2I-214ENST00000614048 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
GTF2I-214ENST00000614048 SOGA1O94964 1423 aa14.75□□□□□ -0.05
GTF2I-214ENST00000614048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
GTF2I-214ENST00000614048 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
GTF2I-214ENST00000614048 CEP162Q5TB80 1403 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms