RNA–Protein interactions for RNA: ENST00000528095.5

RSF1-206, Transcript of remodeling and spacing factor 1, humanhuman

TSL 1 (best)

Gene RSF1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-206ENST00000528095 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
RSF1-206ENST00000528095 CCDC180Q9P1Z9 1646 aa37.85■■■■□ 3.65
RSF1-206ENST00000528095 ABCC9O60706 1549 aa36.77■■■■□ 3.48
RSF1-206ENST00000528095 ZCCHC6Q5VYS8 1495 aaKnown RBP35.56■■■■□ 3.28
RSF1-206ENST00000528095 NACADO15069 1562 aa35.48■■■■□ 3.27
RSF1-206ENST00000528095 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
RSF1-206ENST00000528095 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
RSF1-206ENST00000528095 MYO15BQ96JP2 1530 aa35.34■■■■□ 3.25
RSF1-206ENST00000528095 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
RSF1-206ENST00000528095 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
RSF1-206ENST00000528095 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
RSF1-206ENST00000528095 BICRAQ9NZM4 1560 aa34.46■■■■□ 3.11
RSF1-206ENST00000528095 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
RSF1-206ENST00000528095 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
RSF1-206ENST00000528095 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
RSF1-206ENST00000528095 EIF4G1Q04637 1599 aaKnown RBP33.49■■■□□ 2.95
RSF1-206ENST00000528095 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
RSF1-206ENST00000528095 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
RSF1-206ENST00000528095 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
RSF1-206ENST00000528095 BAZ1AQ9NRL2 1556 aaPredicted RBP33.01■■■□□ 2.87
RSF1-206ENST00000528095 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
RSF1-206ENST00000528095 ATAD2BQ9ULI0 1458 aa32.78■■■□□ 2.84
RSF1-206ENST00000528095 SMARCA2P51531 1590 aa32.75■■■□□ 2.83
RSF1-206ENST00000528095 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
RSF1-206ENST00000528095 NCAPD3P42695 1498 aa32.71■■■□□ 2.83
RSF1-206ENST00000528095 HMGXB3Q12766 1538 aa32.62■■■□□ 2.81
RSF1-206ENST00000528095 WIZO95785 1651 aa32.55■■■□□ 2.8
RSF1-206ENST00000528095 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
RSF1-206ENST00000528095 BAZ1BQ9UIG0 1483 aaKnown RBP32.51■■■□□ 2.8
RSF1-206ENST00000528095 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
RSF1-206ENST00000528095 NESP48681 1621 aa31.91■■■□□ 2.7
RSF1-206ENST00000528095 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
RSF1-206ENST00000528095 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
RSF1-206ENST00000528095 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
RSF1-206ENST00000528095 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
RSF1-206ENST00000528095 CFTRP13569 1480 aa31.64■■■□□ 2.66
RSF1-206ENST00000528095 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
RSF1-206ENST00000528095 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
RSF1-206ENST00000528095 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
RSF1-206ENST00000528095 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
RSF1-206ENST00000528095 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
RSF1-206ENST00000528095 FANCD2Q9BXW9 1451 aa31.41■■■□□ 2.62
RSF1-206ENST00000528095 CEP164Q9UPV0 1460 aa31.36■■■□□ 2.61
RSF1-206ENST00000528095 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
RSF1-206ENST00000528095 CUX2O14529 1486 aa31.25■■■□□ 2.59
RSF1-206ENST00000528095 WDR62O43379 1518 aa31.2■■■□□ 2.58
RSF1-206ENST00000528095 URB2Q14146 1524 aaKnown RBP31.12■■■□□ 2.57
RSF1-206ENST00000528095 TOPBP1Q92547 1522 aa30.96■■■□□ 2.55
RSF1-206ENST00000528095 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.55
RSF1-206ENST00000528095 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
RSF1-206ENST00000528095 CUX1P39880 1505 aa30.82■■■□□ 2.52
RSF1-206ENST00000528095 POLA1P09884 1462 aaPredicted RBP30.71■■■□□ 2.51
RSF1-206ENST00000528095 IFT140Q96RY7 1462 aa30.67■■■□□ 2.5
RSF1-206ENST00000528095 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
RSF1-206ENST00000528095 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
RSF1-206ENST00000528095 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
RSF1-206ENST00000528095 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
RSF1-206ENST00000528095 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
RSF1-206ENST00000528095 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
RSF1-206ENST00000528095 ZNF608Q9ULD9 1512 aaPredicted RBP30.56■■■□□ 2.48
RSF1-206ENST00000528095 RAD54L2Q9Y4B4 1467 aa30.56■■■□□ 2.48
RSF1-206ENST00000528095 SOGA1O94964 1423 aa30.53■■■□□ 2.48
RSF1-206ENST00000528095 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
RSF1-206ENST00000528095 WDR97A6NE52 1622 aa30.49■■■□□ 2.47
RSF1-206ENST00000528095 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.466e-8■■■■■ 31.2
RSF1-206ENST00000528095 ABCA10Q8WWZ4 1543 aa30.37■■■□□ 2.45
RSF1-206ENST00000528095 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
RSF1-206ENST00000528095 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
RSF1-206ENST00000528095 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
RSF1-206ENST00000528095 GAPVD1Q14C86 1478 aa30.21■■■□□ 2.43
RSF1-206ENST00000528095 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
RSF1-206ENST00000528095 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
RSF1-206ENST00000528095 CHD1O14646 1710 aa30.1■■■□□ 2.41
RSF1-206ENST00000528095 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
RSF1-206ENST00000528095 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.4
RSF1-206ENST00000528095 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
RSF1-206ENST00000528095 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
RSF1-206ENST00000528095 ADAMTS12P58397 1594 aa29.97■■■□□ 2.39
RSF1-206ENST00000528095 KIF27Q86VH2 1401 aa29.97■■■□□ 2.39
RSF1-206ENST00000528095 SYNJ2O15056 1496 aa29.96■■■□□ 2.39
RSF1-206ENST00000528095 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
RSF1-206ENST00000528095 FBLN2P98095 1184 aa29.91■■■□□ 2.38
RSF1-206ENST00000528095 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
RSF1-206ENST00000528095 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
RSF1-206ENST00000528095 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
RSF1-206ENST00000528095 IGF1RP08069 1367 aa29.83■■■□□ 2.37
RSF1-206ENST00000528095 GRIN2AQ12879 1464 aa29.81■■■□□ 2.36
RSF1-206ENST00000528095 CUL7Q14999 1698 aa29.81■■■□□ 2.36
RSF1-206ENST00000528095 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
RSF1-206ENST00000528095 CLASP1Q7Z460 1538 aa29.73■■■□□ 2.35
RSF1-206ENST00000528095 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
RSF1-206ENST00000528095 NUP160Q12769 1436 aa29.67■■■□□ 2.34
RSF1-206ENST00000528095 CARMIL1Q5VZK9 1371 aa29.64■■■□□ 2.34
RSF1-206ENST00000528095 RIMBP3CA6NJZ7 1639 aa29.55■■■□□ 2.32
RSF1-206ENST00000528095 RIMBP3BA6NNM3 1639 aa29.55■■■□□ 2.32
RSF1-206ENST00000528095 RIMBP3Q9UFD9 1639 aa29.55■■■□□ 2.32
RSF1-206ENST00000528095 ARHGEF11O15085 1522 aa29.54■■■□□ 2.32
RSF1-206ENST00000528095 EEA1Q15075 1411 aa29.52■■■□□ 2.32
RSF1-206ENST00000528095 RAPGEF2Q9Y4G8 1499 aa29.51■■■□□ 2.31
RSF1-206ENST00000528095 PRXQ9BXM0 1461 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms