Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 NCSTN-207ENST00000437169 448 ntTSL 319.29■□□□□ 0.681e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-226ENST00000559818 878 ntTSL 515.65■□□□□ 0.11e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-210ENST00000558132 580 ntTSL 310.5□□□□□ -0.731e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-237ENST00000561022 834 ntTSL 510.5□□□□□ -0.731e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-214ENST00000558985 780 ntTSL 210.3□□□□□ -0.761e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-232ENST00000560466 665 ntTSL 59.63□□□□□ -0.871e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-230ENST00000560367 777 ntTSL 37.27□□□□□ -1.251e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-218ENST00000559176 744 ntTSL 55.65□□□□□ -1.51e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-216ENST00000558998 543 ntTSL 55.65□□□□□ -1.51e-7■■■□□ 15.8
SND1Q7KZF4 ANXA2-212ENST00000558503 828 ntTSL 55.24□□□□□ -1.571e-7■■■□□ 15.8
SND1Q7KZF4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.012e-7■■■□□ 15.8
SND1Q7KZF4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.112e-7■■■□□ 15.8
SND1Q7KZF4 SLC39A9-208ENST00000556125 944 ntTSL 320.52■□□□□ 0.883e-7■■■□□ 15.8
SND1Q7KZF4 HPR-203ENST00000561690 634 ntTSL 5 BASIC12.16□□□□□ -0.462e-6■■■□□ 15.8
SND1Q7KZF4 HPR-201ENST00000356967 1110 ntTSL 5 BASIC10.76□□□□□ -0.692e-6■■■□□ 15.8
SND1Q7KZF4 HPR-202ENST00000540303 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.72e-6■■■□□ 15.8
SND1Q7KZF4 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.512e-12■■■□□ 15.8
SND1Q7KZF4 TMEM214-202ENST00000321326 2700 ntTSL 222.79■■□□□ 1.245e-10■■■□□ 15.8
SND1Q7KZF4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.65■■□□□ 1.065e-10■■■□□ 15.8
SND1Q7KZF4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.865e-10■■■□□ 15.8
SND1Q7KZF4 TMEM214-205ENST00000434544 834 ntTSL 217.65■□□□□ 0.425e-10■■■□□ 15.8
SND1Q7KZF4 TMEM214-208ENST00000460665 1967 ntTSL 214.84□□□□□ -0.035e-10■■■□□ 15.8
SND1Q7KZF4 TMEM214-210ENST00000469445 900 ntTSL 211.54□□□□□ -0.562e-10■■■□□ 15.8
SND1Q7KZF4 FN1-216ENST00000469569 629 ntTSL 29.51□□□□□ -0.896e-7■■■□□ 15.8
SND1Q7KZF4 COX7A2-208ENST00000509698 480 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.641e-8■■■□□ 15.8
SND1Q7KZF4 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.921e-8■■■□□ 15.8
SND1Q7KZF4 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC8.73□□□□□ -1.011e-8■■■□□ 15.8
SND1Q7KZF4 COX7A2-204ENST00000459637 501 ntTSL 26.52□□□□□ -1.371e-8■■■□□ 15.8
SND1Q7KZF4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.05□□□□□ -1.441e-8■■■□□ 15.8
SND1Q7KZF4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.36□□□□□ -2.191e-8■■■□□ 15.8
SND1Q7KZF4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.214e-14■■■□□ 15.8
SND1Q7KZF4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.64■■□□□ 1.052e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.992e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-208ENST00000518656 1059 ntTSL 1 (best)20.43■□□□□ 0.862e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-214ENST00000521521 499 ntTSL 418.76■□□□□ 0.592e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-213ENST00000521385 2320 ntTSL 1 (best)18.56■□□□□ 0.562e-7■■■□□ 15.8
SND1Q7KZF4 GPC1-203ENST00000425056 1085 ntTSL 518.27■□□□□ 0.526e-6■■■□□ 15.8
SND1Q7KZF4 BMP1-206ENST00000483364 2362 ntTSL 1 (best)17.88■□□□□ 0.452e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-218ENST00000523849 789 ntTSL 417.47■□□□□ 0.392e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.46■□□□□ 0.392e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.86■□□□□ 0.292e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-209ENST00000518913 2663 ntTSL 1 (best)16.63■□□□□ 0.252e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-211ENST00000520970 4333 ntTSL 1 (best)16.37■□□□□ 0.212e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-205ENST00000471755 2695 ntTSL 1 (best)16.28■□□□□ 0.22e-7■■■□□ 15.8
SND1Q7KZF4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.084e-14■■■□□ 15.8
SND1Q7KZF4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.35■□□□□ 0.052e-7■■■□□ 15.8
SND1Q7KZF4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.032e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-210ENST00000520626 3925 ntTSL 1 (best)14.64□□□□□ -0.072e-7■■■□□ 15.8
SND1Q7KZF4 BMP1-212ENST00000520982 3244 ntTSL 1 (best)14.57□□□□□ -0.082e-7■■■□□ 15.8
SND1Q7KZF4 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.162e-7■■■□□ 15.8
SND1Q7KZF4 CPT1A-206ENST00000540367 2496 ntTSL 1 (best) BASIC12.52□□□□□ -0.42e-7■■■□□ 15.8
SND1Q7KZF4 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.492e-7■■■□□ 15.8
SND1Q7KZF4 MRPL32-203ENST00000432845 2734 ntTSL 211.95□□□□□ -0.52e-7■■■□□ 15.8
SND1Q7KZF4 MRPL32-202ENST00000413995 730 ntTSL 210.65□□□□□ -0.72e-7■■■□□ 15.8
SND1Q7KZF4 RCN1-206ENST00000530348 527 ntTSL 410.59□□□□□ -0.714e-14■■■□□ 15.8
SND1Q7KZF4 TOR1AIP1-204ENST00000474875 830 ntTSL 59.63□□□□□ -0.872e-7■■■□□ 15.8
SND1Q7KZF4 MRPL32-204ENST00000496564 488 ntTSL 49.55□□□□□ -0.882e-7■■■□□ 15.8
SND1Q7KZF4 SLC35B1-215ENST00000511657 548 ntTSL 38.88□□□□□ -0.992e-7■■■□□ 15.8
SND1Q7KZF4 SLC35B1-213ENST00000508926 393 ntTSL 27.43□□□□□ -1.222e-7■■■□□ 15.8
SND1Q7KZF4 MANBA-205ENST00000508141 549 ntTSL 23.65□□□□□ -1.832e-7■■■□□ 15.8
SND1Q7KZF4 HM13-219ENST00000487964 902 ntTSL 517.01■□□□□ 0.316e-9■■■□□ 15.8
SND1Q7KZF4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.241e-8■■■□□ 15.8
SND1Q7KZF4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.191e-8■■■□□ 15.8
SND1Q7KZF4 HM13-220ENST00000492709 1248 ntTSL 515.54■□□□□ 0.081e-8■■■□□ 15.8
SND1Q7KZF4 HM13-213ENST00000469126 756 ntTSL 515.36■□□□□ 0.051e-8■■■□□ 15.8
SND1Q7KZF4 HM13-222ENST00000494153 757 ntTSL 514.5□□□□□ -0.095e-9■■■□□ 15.8
SND1Q7KZF4 HM13-206ENST00000460389 1075 ntTSL 514.27□□□□□ -0.135e-9■■■□□ 15.8
SND1Q7KZF4 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC12.19□□□□□ -0.461e-8■■■□□ 15.8
SND1Q7KZF4 HM13-212ENST00000469097 801 ntTSL 511.94□□□□□ -0.55e-9■■■□□ 15.8
SND1Q7KZF4 HM13-214ENST00000472128 865 ntTSL 510.4□□□□□ -0.746e-9■■■□□ 15.8
SND1Q7KZF4 KDELR1-202ENST00000594643 561 ntTSL 220.73■□□□□ 0.916e-16■■■□□ 15.8
SND1Q7KZF4 RPN1-205ENST00000490166 573 ntTSL 34.91□□□□□ -1.625e-13■■■□□ 15.8
SND1Q7KZF4 LAMA5-210ENST00000491036 728 ntTSL 216.63■□□□□ 0.252e-11■■■□□ 15.8
SND1Q7KZF4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.52■■□□□ 1.21e-7■■■□□ 15.8
SND1Q7KZF4 AC138894.1-206ENST00000568224 1721 ntTSL 1 (best)22.45■■□□□ 1.191e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-209ENST00000561689 1957 ntTSL 222.08■■□□□ 1.131e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-230ENST00000568076 1968 ntTSL 521.9■■□□□ 1.11e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.5■■□□□ 1.031e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-245ENST00000636172 1536 ntTSL 221.4■■□□□ 1.021e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-250ENST00000636839 2018 ntTSL 520.85■□□□□ 0.931e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.91e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-225ENST00000566824 1326 ntTSL 520.24■□□□□ 0.831e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-262ENST00000637699 1228 ntTSL 220.08■□□□□ 0.811e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-260ENST00000637578 1577 ntTSL 219.83■□□□□ 0.761e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-258ENST00000637184 1753 ntTSL 519.82■□□□□ 0.761e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-233ENST00000568452 1616 ntTSL 519.79■□□□□ 0.761e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-263ENST00000637871 1606 ntTSL 519.6■□□□□ 0.731e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.43■□□□□ 0.71e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.32■□□□□ 0.681e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-241ENST00000635861 1404 ntTSL 519.02■□□□□ 0.641e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.98■□□□□ 0.631e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-237ENST00000569030 1109 ntTSL 218.95■□□□□ 0.621e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.95■□□□□ 0.621e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-221ENST00000566057 931 ntTSL 1 (best)18.95■□□□□ 0.621e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-214ENST00000565140 1225 ntTSL 218.95■□□□□ 0.621e-7■■■□□ 15.8
SND1Q7KZF4 AC138894.1-208ENST00000636017 2223 ntTSL 518.82■□□□□ 0.61e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-239ENST00000628023 1183 ntTSL 518.79■□□□□ 0.61e-7■■■□□ 15.8
SND1Q7KZF4 AC138894.1-211ENST00000636766 2061 ntTSL 518.59■□□□□ 0.571e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-247ENST00000636351 1292 ntTSL 518.46■□□□□ 0.551e-7■■■□□ 15.8
SND1Q7KZF4 CLN3-256ENST00000637107 1946 ntTSL 518.36■□□□□ 0.531e-7■■■□□ 15.8
Retrieved 100 of 13,567 protein–RNA pairs in 151.3 ms