RNA–Protein interactions for RNA: ENST00000437169.5

NCSTN-207, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 448 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-207ENST00000437169 NISCHQ9Y2I1 1504 aa47.35■■■■■ 5.17
NCSTN-207ENST00000437169 CCDC180Q9P1Z9 1646 aa42.54■■■■■ 4.4
NCSTN-207ENST00000437169 ABCC9O60706 1549 aa42.46■■■■■ 4.39
NCSTN-207ENST00000437169 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
NCSTN-207ENST00000437169 NACADO15069 1562 aa40.17■■■■■ 4.02
NCSTN-207ENST00000437169 DNAJC5BQ9UF47 199 aa39.94■■■■□ 3.98
NCSTN-207ENST00000437169 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
NCSTN-207ENST00000437169 UNC13AQ9UPW8 1703 aa39.68■■■■□ 3.94
NCSTN-207ENST00000437169 MYO15BQ96JP2 1530 aa39.67■■■■□ 3.94
NCSTN-207ENST00000437169 PABPN1Q86U42 306 aaKnown RBP eCLIP39.48■■■■□ 3.91
NCSTN-207ENST00000437169 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.89
NCSTN-207ENST00000437169 ZCCHC6Q5VYS8 1495 aaKnown RBP39.25■■■■□ 3.87
NCSTN-207ENST00000437169 DCAF1Q9Y4B6 1507 aa39.14■■■■□ 3.86
NCSTN-207ENST00000437169 SHROOM4Q9ULL8 1493 aa38.76■■■■□ 3.8
NCSTN-207ENST00000437169 SCRIBQ14160 1630 aa38.68■■■■□ 3.78
NCSTN-207ENST00000437169 CC2D2AQ9P2K1 1620 aa38.42■■■■□ 3.74
NCSTN-207ENST00000437169 EIF4G1Q04637 1599 aaKnown RBP38.33■■■■□ 3.73
NCSTN-207ENST00000437169 CECR2Q9BXF3 1484 aa38.25■■■■□ 3.71
NCSTN-207ENST00000437169 NCAPD3P42695 1498 aa37.1■■■■□ 3.53
NCSTN-207ENST00000437169 ATAD2BQ9ULI0 1458 aa36.98■■■■□ 3.51
NCSTN-207ENST00000437169 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
NCSTN-207ENST00000437169 SMARCA2P51531 1590 aa36.83■■■■□ 3.49
NCSTN-207ENST00000437169 HMGXB3Q12766 1538 aa36.83■■■■□ 3.49
NCSTN-207ENST00000437169 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
NCSTN-207ENST00000437169 PEG3Q9GZU2 1588 aa36.65■■■■□ 3.46
NCSTN-207ENST00000437169 DNAJC5Q9H3Z4 198 aa36.63■■■■□ 3.45
NCSTN-207ENST00000437169 CUX2O14529 1486 aa36.62■■■■□ 3.45
NCSTN-207ENST00000437169 ERCC6Q03468 1493 aa36.57■■■■□ 3.45
NCSTN-207ENST00000437169 BAZ1BQ9UIG0 1483 aaKnown RBP36.55■■■■□ 3.44
NCSTN-207ENST00000437169 NESP48681 1621 aa36.52■■■■□ 3.44
NCSTN-207ENST00000437169 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
NCSTN-207ENST00000437169 LAMC3Q9Y6N6 1575 aa36.26■■■■□ 3.39
NCSTN-207ENST00000437169 THOC2Q8NI27 1593 aaKnown RBP36.21■■■■□ 3.39
NCSTN-207ENST00000437169 KIF21AQ7Z4S6 1674 aa36.1■■■■□ 3.37
NCSTN-207ENST00000437169 WIZO95785 1651 aa36.06■■■■□ 3.36
NCSTN-207ENST00000437169 PDS5BQ9NTI5 1447 aa35.97■■■■□ 3.35
NCSTN-207ENST00000437169 CADPSQ9ULU8 1353 aa35.92■■■■□ 3.34
NCSTN-207ENST00000437169 RSF1Q96T23 1441 aaPredicted RBP35.7■■■■□ 3.31
NCSTN-207ENST00000437169 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
NCSTN-207ENST00000437169 WDR62O43379 1518 aa35.67■■■■□ 3.3
NCSTN-207ENST00000437169 TOP2AP11388 1531 aaKnown RBP35.57■■■■□ 3.29
NCSTN-207ENST00000437169 CFTRP13569 1480 aa35.54■■■■□ 3.28
NCSTN-207ENST00000437169 CEP164Q9UPV0 1460 aa35.53■■■■□ 3.28
NCSTN-207ENST00000437169 FANCD2Q9BXW9 1451 aa35.51■■■■□ 3.28
NCSTN-207ENST00000437169 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
NCSTN-207ENST00000437169 PRDM2Q13029 1718 aa35.28■■■■□ 3.24
NCSTN-207ENST00000437169 CCDC88BA6NC98 1476 aa35.17■■■■□ 3.22
NCSTN-207ENST00000437169 TOPBP1Q92547 1522 aa34.87■■■■□ 3.17
NCSTN-207ENST00000437169 TRIM41Q8WV44 630 aa34.87■■■■□ 3.17
NCSTN-207ENST00000437169 OSCARQ8IYS5 282 aa34.86■■■■□ 3.17
NCSTN-207ENST00000437169 IFT140Q96RY7 1462 aa34.84■■■■□ 3.17
NCSTN-207ENST00000437169 ZNF608Q9ULD9 1512 aaPredicted RBP34.83■■■■□ 3.17
NCSTN-207ENST00000437169 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
NCSTN-207ENST00000437169 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
NCSTN-207ENST00000437169 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
NCSTN-207ENST00000437169 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
NCSTN-207ENST00000437169 RIMBP3CA6NJZ7 1639 aa34.55■■■■□ 3.12
NCSTN-207ENST00000437169 RIMBP3BA6NNM3 1639 aa34.55■■■■□ 3.12
NCSTN-207ENST00000437169 RIMBP3Q9UFD9 1639 aa34.55■■■■□ 3.12
NCSTN-207ENST00000437169 POLA1P09884 1462 aaPredicted RBP34.51■■■■□ 3.11
NCSTN-207ENST00000437169 AQRO60306 1485 aaKnown RBP eCLIP34.47■■■■□ 3.11
NCSTN-207ENST00000437169 CHD1O14646 1710 aa34.43■■■■□ 3.1
NCSTN-207ENST00000437169 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
NCSTN-207ENST00000437169 RAD54L2Q9Y4B4 1467 aa34.37■■■■□ 3.09
NCSTN-207ENST00000437169 SOGA1O94964 1423 aa34.3■■■■□ 3.08
NCSTN-207ENST00000437169 CUX1P39880 1505 aa34.28■■■■□ 3.08
NCSTN-207ENST00000437169 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
NCSTN-207ENST00000437169 WDR97A6NE52 1622 aa34.23■■■■□ 3.07
NCSTN-207ENST00000437169 TDRD9Q8NDG6 1382 aaKnown RBP34.23■■■■□ 3.07
NCSTN-207ENST00000437169 SNAPC4Q5SXM2 1469 aa34.12■■■■□ 3.05
NCSTN-207ENST00000437169 FBLN2P98095 1184 aa34.1■■■■□ 3.05
NCSTN-207ENST00000437169 ARAP1Q96P48 1450 aa34.08■■■■□ 3.05
NCSTN-207ENST00000437169 MAGI1Q96QZ7 1491 aaPredicted RBP34.04■■■■□ 3.04
NCSTN-207ENST00000437169 CLASP1Q7Z460 1538 aa34.04■■■■□ 3.04
NCSTN-207ENST00000437169 CYB5RLQ6IPT4 315 aa34.03■■■■□ 3.04
NCSTN-207ENST00000437169 GRIN2BQ13224 1484 aa34.01■■■■□ 3.04
NCSTN-207ENST00000437169 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
NCSTN-207ENST00000437169 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
NCSTN-207ENST00000437169 SUPT5HO00267 1087 aaKnown RBP33.92■■■■□ 3.02
NCSTN-207ENST00000437169 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
NCSTN-207ENST00000437169 ABCA10Q8WWZ4 1543 aa33.91■■■■□ 3.02
NCSTN-207ENST00000437169 ABCA5Q8WWZ7 1642 aa33.9■■■■□ 3.02
NCSTN-207ENST00000437169 GAPVD1Q14C86 1478 aa33.89■■■■□ 3.02
NCSTN-207ENST00000437169 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
NCSTN-207ENST00000437169 BIVM-ERCC5R4GMW8 1640 aa33.76■■■■□ 3
NCSTN-207ENST00000437169 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
NCSTN-207ENST00000437169 WRNQ14191 1432 aaPredicted RBP eCLIP33.69■■■□□ 2.98
NCSTN-207ENST00000437169 ADAMTS12P58397 1594 aa33.63■■■□□ 2.97
NCSTN-207ENST00000437169 GRIN2AQ12879 1464 aa33.6■■■□□ 2.97
NCSTN-207ENST00000437169 TRHP20396 242 aaPredicted RBP33.59■■■□□ 2.97
NCSTN-207ENST00000437169 CEP170Q5SW79 1584 aa33.53■■■□□ 2.96
NCSTN-207ENST00000437169 NUP160Q12769 1436 aa33.53■■■□□ 2.96
NCSTN-207ENST00000437169 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.95
NCSTN-207ENST00000437169 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
NCSTN-207ENST00000437169 FHAD1B1AJZ9 1412 aa33.46■■■□□ 2.95
NCSTN-207ENST00000437169 SHROOM2Q13796 1616 aa33.44■■■□□ 2.94
NCSTN-207ENST00000437169 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
NCSTN-207ENST00000437169 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
NCSTN-207ENST00000437169 JPH4Q96JJ6 628 aa33.09■■■□□ 2.89
NCSTN-207ENST00000437169 IGF1RP08069 1367 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms