RNA–Protein interactions for RNA: ENST00000494153.5

HM13-222, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-222ENST00000494153 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
HM13-222ENST00000494153 ABCC9O60706 1549 aa32.89■■■□□ 2.86
HM13-222ENST00000494153 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
HM13-222ENST00000494153 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
HM13-222ENST00000494153 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
HM13-222ENST00000494153 NACADO15069 1562 aa30.68■■■□□ 2.5
HM13-222ENST00000494153 PABPN1Q86U42 306 aaKnown RBP eCLIP30.57■■■□□ 2.48
HM13-222ENST00000494153 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
HM13-222ENST00000494153 UNC13AQ9UPW8 1703 aa30.31■■■□□ 2.44
HM13-222ENST00000494153 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
HM13-222ENST00000494153 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
HM13-222ENST00000494153 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
HM13-222ENST00000494153 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
HM13-222ENST00000494153 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
HM13-222ENST00000494153 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
HM13-222ENST00000494153 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
HM13-222ENST00000494153 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
HM13-222ENST00000494153 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
HM13-222ENST00000494153 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
HM13-222ENST00000494153 CUX2O14529 1486 aa28.52■■■□□ 2.16
HM13-222ENST00000494153 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
HM13-222ENST00000494153 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
HM13-222ENST00000494153 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
HM13-222ENST00000494153 NESP48681 1621 aa28.12■■■□□ 2.09
HM13-222ENST00000494153 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
HM13-222ENST00000494153 SMARCA2P51531 1590 aa28.06■■■□□ 2.08
HM13-222ENST00000494153 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
HM13-222ENST00000494153 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
HM13-222ENST00000494153 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.05
HM13-222ENST00000494153 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
HM13-222ENST00000494153 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
HM13-222ENST00000494153 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
HM13-222ENST00000494153 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
HM13-222ENST00000494153 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
HM13-222ENST00000494153 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
HM13-222ENST00000494153 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
HM13-222ENST00000494153 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
HM13-222ENST00000494153 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
HM13-222ENST00000494153 WDR62O43379 1518 aa27.39■■□□□ 1.98
HM13-222ENST00000494153 WIZO95785 1651 aa27.22■■□□□ 1.95
HM13-222ENST00000494153 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
HM13-222ENST00000494153 FANCD2Q9BXW9 1451 aa27.17■■□□□ 1.94
HM13-222ENST00000494153 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
HM13-222ENST00000494153 CFTRP13569 1480 aa27.05■■□□□ 1.92
HM13-222ENST00000494153 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
HM13-222ENST00000494153 RIMBP3CA6NJZ7 1639 aa26.85■■□□□ 1.89
HM13-222ENST00000494153 RIMBP3BA6NNM3 1639 aa26.85■■□□□ 1.89
HM13-222ENST00000494153 RIMBP3Q9UFD9 1639 aa26.85■■□□□ 1.89
HM13-222ENST00000494153 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
HM13-222ENST00000494153 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
HM13-222ENST00000494153 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
HM13-222ENST00000494153 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
HM13-222ENST00000494153 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
HM13-222ENST00000494153 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
HM13-222ENST00000494153 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
HM13-222ENST00000494153 CYB5RLQ6IPT4 315 aa26.59■■□□□ 1.85
HM13-222ENST00000494153 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
HM13-222ENST00000494153 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
HM13-222ENST00000494153 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
HM13-222ENST00000494153 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.826e-8■■■■□ 25.7
HM13-222ENST00000494153 TRHP20396 242 aaPredicted RBP26.45■■□□□ 1.82
HM13-222ENST00000494153 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
HM13-222ENST00000494153 CHD1O14646 1710 aa26.43■■□□□ 1.82
HM13-222ENST00000494153 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
HM13-222ENST00000494153 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
HM13-222ENST00000494153 FBLN2P98095 1184 aa26.38■■□□□ 1.81
HM13-222ENST00000494153 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
HM13-222ENST00000494153 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
HM13-222ENST00000494153 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
HM13-222ENST00000494153 SOGA1O94964 1423 aa26.17■■□□□ 1.78
HM13-222ENST00000494153 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
HM13-222ENST00000494153 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
HM13-222ENST00000494153 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
HM13-222ENST00000494153 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
HM13-222ENST00000494153 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
HM13-222ENST00000494153 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
HM13-222ENST00000494153 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
HM13-222ENST00000494153 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
HM13-222ENST00000494153 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
HM13-222ENST00000494153 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
HM13-222ENST00000494153 CUX1P39880 1505 aa25.95■■□□□ 1.74
HM13-222ENST00000494153 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
HM13-222ENST00000494153 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
HM13-222ENST00000494153 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
HM13-222ENST00000494153 ABCA5Q8WWZ7 1642 aa25.72■■□□□ 1.71
HM13-222ENST00000494153 ABCA10Q8WWZ4 1543 aa25.71■■□□□ 1.71
HM13-222ENST00000494153 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
HM13-222ENST00000494153 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
HM13-222ENST00000494153 NUP160Q12769 1436 aa25.59■■□□□ 1.69
HM13-222ENST00000494153 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
HM13-222ENST00000494153 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
HM13-222ENST00000494153 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
HM13-222ENST00000494153 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
HM13-222ENST00000494153 KIF13AQ9H1H9 1805 aa25.47■■□□□ 1.67
HM13-222ENST00000494153 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
HM13-222ENST00000494153 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
HM13-222ENST00000494153 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
HM13-222ENST00000494153 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
HM13-222ENST00000494153 JPH4Q96JJ6 628 aa25.34■■□□□ 1.65
HM13-222ENST00000494153 FAM69CQ0P6D2 419 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms